Cow genome map
| Conread name: | rova012_h11.y1 |
| Conread position: | 1-273 |
| Cow position: | chr19:14948270-14947998 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-297 |
| Cow position: | chr19:14940773-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-351 |
| Cow position: | chr19:14948354-14948004 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 1-375 |
| Cow position: | chr19:43570027-43569657 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 294, 0 |
| Conread position: | 1-404 |
| Cow position: | chr19:23597310-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 355 |
| Conread position: | 1-406 |
| Cow position: | chr19:20635352-20634950 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 105 |
| Conread position: | 1-484 |
| Cow position: | chr19:23650003-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 1-485 |
| Cow position: | chr19:14960194-14959714 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 41 |
| Conread position: | 1-502 |
| Cow position: | chr19:23614637-23615136 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 184 |
| Conread position: | 1-511 |
| Cow position: | chr19:14960362-14959856 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-514 |
| Cow position: | chr19:14959624-14959120 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 267 |
| Conread position: | 1-516 |
| Cow position: | chr19:14940353-14940869 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 278 |
| Conread position: | 1-516 |
| Cow position: | chr19:20678148-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 285 |
| Conread position: | 1-516 |
| Cow position: | chr19:20678232-20678745 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 97 |
| Conread position: | 1-518 |
| Cow position: | chr19:20677812-20678329 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 198 |
| Conread position: | 1-519 |
| Cow position: | chr19:14940269-14940787 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-519 |
| Cow position: | chr19:14940437-14940955 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 363 |
| Conread position: | 1-519 |
| Cow position: | chr19:20635688-20635170 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 437, 441 |
| Conread position: | 1-519 |
| Cow position: | chr19:23613797-23614315 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 435, 448 |
| Conread position: | 1-519 |
| Cow position: | chr19:23613965-23614483 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 366 |
| Conread position: | 1-519 |
| Cow position: | chr19:23614469-23614987 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 183 |
| Conread position: | 1-519 |
| Cow position: | chr19:23614553-23615071 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 93 |
| Conread position: | 1-519 |
| Cow position: | chr19:23649583-23650101 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 1-520 |
| Cow position: | chr19:14940521-14941040 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-520 |
| Cow position: | chr19:23597142-23597662 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 511, 0 |
| Conread position: | 1-522 |
| Cow position: | chr19:20677896-20678417 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 1-523 |
| Cow position: | chr19:23649751-23650273 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 363 |
| Conread position: | 1-528 |
| Cow position: | chr19:20635604-20635077 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 206 |
| Conread position: | 1-528 |
| Cow position: | chr19:23649919-23650446 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 1-530 |
| Cow position: | chr19:20678064-20678593 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 97 |
| Conread position: | 2-501 |
| Cow position: | chr19:20635519-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 267 |
| Conread position: | 2-513 |
| Cow position: | chr19:23649668-23650179 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 2-516 |
| Cow position: | chr19:14940018-14940533 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 97 |
| Conread position: | 2-518 |
| Cow position: | chr19:23613714-23614230 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-529 |
| Cow position: | chr19:23649500-23650027 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 3-519 |
| Cow position: | chr19:14940186-14940703 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 3-519 |
| Cow position: | chr19:23614218-23614735 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 3-527 |
| Cow position: | chr19:20635435-20634911 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 184 |
| Conread position: | 3-528 |
| Cow position: | chr19:43570274-43569752 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 3-529 |
| Cow position: | chr19:43570193-43569671 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 95 |
| Conread position: | 3-530 |
| Cow position: | chr19:23613546-23614076 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 3-530 |
| Cow position: | chr19:23649837-23650364 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 161 |
| Conread position: | 5-445 |
| Cow position: | chr19:14948433-14947994 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 33 |
| Conread position: | 5-488 |
| Cow position: | chr19:23597230-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 431 |
| Conread position: | 5-517 |
| Cow position: | chr19:20677564-20678076 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 440 |
| Conread position: | 5-519 |
| Cow position: | chr19:14959368-14958869 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-523 |
| Cow position: | chr19:23597062-23597580 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-518 |
| Cow position: | chr19:14959851-14959359 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 109, 60 |
| Conread position: | 14-317 |
| Cow position: | chr19:14959122-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 266, 255 |
| Conread position: | 17-394 |
| Cow position: | chr19:14959197-14958826 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 23-517 |
| Cow position: | chr19:23649435-23649931 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 408 |
| Conread position: | 28-518 |
| Cow position: | chr19:23614160-23614650 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-520 |
| Cow position: | chr19:43570408-43569928 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 15 |
| Conread position: | 29-529 |
| Cow position: | chr19:23596921-23597418 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 112 |
| Conread position: | 36-528 |
| Cow position: | chr19:23649366-23649858 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 37-472 |
| Cow position: | chr19:14940641-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-515 |
| Cow position: | chr19:23614421-23614899 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 37-516 |
| Cow position: | chr19:14959670-14959202 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 19 |
| Conread position: | 37-519 |
| Cow position: | chr19:23614337-23614819 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 37-521 |
| Cow position: | chr19:20677680-20678164 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 77 |
| Conread position: | 37-524 |
| Cow position: | chr19:14916028-14916503 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 101 |
| Conread position: | 37-524 |
| Cow position: | chr19:23614085-23614572 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-525 |
| Cow position: | chr19:14960410-14959924 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 0 |
| Conread position: | 37-529 |
| Cow position: | chr19:23613413-23613905 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-516 |
| Cow position: | chr19:14940138-14940616 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-518 |
| Cow position: | chr19:20677513-20677993 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 38-530 |
| Cow position: | chr19:23613666-23614158 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 401 |
| Conread position: | 41-481 |
| Cow position: | chr19:14959257-14958823 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 139 |
| Conread position: | 41-525 |
| Cow position: | chr19:14939973-14940457 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-529 |
| Cow position: | chr19:23649289-23649775 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 407 |
| Conread position: | 49-516 |
| Cow position: | chr19:14915955-14916419 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 49-520 |
| Cow position: | chr19:20677440-20677911 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 120 |
| Conread position: | 52-529 |
| Cow position: | chr19:43570467-43570003 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 58-524 |
| Cow position: | chr19:23613350-23613816 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-523 |
| Cow position: | chr19:23596825-23597244 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 105-523 |
| Cow position: | chr19:20635752-20635334 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 122-526 |
| Cow position: | chr19:14948484-14948081 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 84 |
| Conread position: | 134-521 |
| Cow position: | chr19:20677441-20677828 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 219, 225 |
| Conread position: | 140-530 |
| Cow position: | chr19:23649302-23649692 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-518 |
| Cow position: | chr19:14960456-14960099 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 209-529 |
| Cow position: | chr19:14939973-14940293 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-529 |
| Cow position: | chr19:14915956-14916266 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 242-525 |
| Cow position: | chr19:14960455-14960174 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.