Cow genome map

Conread name: rova012_h11.y1

Conread position: 1-273
Cow position:
Alignm length: 273
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-297
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-351
Cow position:
Alignm length: 353
Alignm identity: 233
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 31

Conread position: 1-375
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 294, 0

Conread position: 1-404
Cow position:
Alignm length: 405
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 355

Conread position: 1-406
Cow position:
Alignm length: 407
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 105

Conread position: 1-484
Cow position:
Alignm length: 486
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-485
Cow position:
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 41

Conread position: 1-502
Cow position:
Alignm length: 505
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 184

Conread position: 1-511
Cow position:
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 1-514
Cow position:
Alignm length: 517
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 267

Conread position: 1-516
Cow position:
Alignm length: 518
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 278

Conread position: 1-516
Cow position:
Alignm length: 517
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 285

Conread position: 1-516
Cow position:
Alignm length: 518
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 97

Conread position: 1-518
Cow position:
Alignm length: 519
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 198

Conread position: 1-519
Cow position:
Alignm length: 519
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-519
Cow position:
Alignm length: 521
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 363

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 441

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 448

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 366

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 183

Conread position: 1-519
Cow position:
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 93

Conread position: 1-519
Cow position:
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 38

Conread position: 1-520
Cow position:
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-520
Cow position:
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 0

Conread position: 1-522
Cow position:
Alignm length: 524
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 97

Conread position: 1-523
Cow position:
Alignm length: 526
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 363

Conread position: 1-528
Cow position:
Alignm length: 530
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 206

Conread position: 1-528
Cow position:
Alignm length: 529
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 1-530
Cow position:
Alignm length: 533
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 97

Conread position: 2-501
Cow position:
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 267

Conread position: 2-513
Cow position:
Alignm length: 514
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 2-516
Cow position:
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 97

Conread position: 2-518
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-529
Cow position:
Alignm length: 529
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 3-519
Cow position:
Alignm length: 519
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 30

Conread position: 3-519
Cow position:
Alignm length: 522
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 3-527
Cow position:
Alignm length: 529
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 184

Conread position: 3-528
Cow position:
Alignm length: 529
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 20

Conread position: 3-529
Cow position:
Alignm length: 530
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 95

Conread position: 3-530
Cow position:
Alignm length: 533
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 3-530
Cow position:
Alignm length: 530
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 161

Conread position: 5-445
Cow position:
Alignm length: 442
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 33

Conread position: 5-488
Cow position:
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 431

Conread position: 5-517
Cow position:
Alignm length: 514
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 440

Conread position: 5-519
Cow position:
Alignm length: 515
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-523
Cow position:
Alignm length: 519
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-518
Cow position:
Alignm length: 512
Alignm identity: 330
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 60

Conread position: 14-317
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 266, 255

Conread position: 17-394
Cow position:
Alignm length: 378
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 23-517
Cow position:
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 408

Conread position: 28-518
Cow position:
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-520
Cow position:
Alignm length: 493
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 15

Conread position: 29-529
Cow position:
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 112

Conread position: 36-528
Cow position:
Alignm length: 495
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 37-472
Cow position:
Alignm length: 436
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-515
Cow position:
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 61

Conread position: 37-516
Cow position:
Alignm length: 481
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 19

Conread position: 37-519
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 75

Conread position: 37-521
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 77

Conread position: 37-524
Cow position:
Alignm length: 497
Alignm identity: 326
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 101

Conread position: 37-524
Cow position:
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-525
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 0

Conread position: 37-529
Cow position:
Alignm length: 493
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-516
Cow position:
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-518
Cow position:
Alignm length: 483
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 60

Conread position: 38-530
Cow position:
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 401

Conread position: 41-481
Cow position:
Alignm length: 443
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 139

Conread position: 41-525
Cow position:
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-529
Cow position:
Alignm length: 488
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 407

Conread position: 49-516
Cow position:
Alignm length: 471
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 49-520
Cow position:
Alignm length: 475
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 120

Conread position: 52-529
Cow position:
Alignm length: 479
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 58-524
Cow position:
Alignm length: 467
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 101-523
Cow position:
Alignm length: 426
Alignm identity: 273
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 25, 10

Conread position: 105-523
Cow position:
Alignm length: 423
Alignm identity: 269
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 52

Conread position: 122-526
Cow position:
Alignm length: 407
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 84

Conread position: 134-521
Cow position:
Alignm length: 390
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 219, 225

Conread position: 140-530
Cow position:
Alignm length: 391
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 157-518
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 209-529
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 218-529
Cow position:
Alignm length: 315
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 15

Conread position: 242-525
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.