Cow genome map
| Conread name: | rova012_h11.y1 |
| Conread position: | 1-467 |
| Cow position: | chr2:5874567-5874101 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 1-476 |
| Cow position: | chr2:82799973-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 1-483 |
| Cow position: | chr2:48689514-48689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 305 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 1-516 |
| Cow position: | chr2:78755279-78755790 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 58 |
| Conread position: | 1-516 |
| Cow position: | chr2:82799721-82800237 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 1-517 |
| Cow position: | chr2:78755863-78756376 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 199 |
| Conread position: | 1-518 |
| Cow position: | chr2:78754859-78755375 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 272 |
| Conread position: | 1-518 |
| Cow position: | chr2:78755613-78756128 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 1-518 |
| Cow position: | chr2:82799805-82800322 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 430 |
| Conread position: | 1-519 |
| Cow position: | chr2:82799553-82800071 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 98 |
| Conread position: | 1-519 |
| Cow position: | chr2:82799637-82800155 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 1-519 |
| Cow position: | chr2:86465545-86466063 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 1-521 |
| Cow position: | chr2:78754289-78754803 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 153 |
| Conread position: | 1-521 |
| Cow position: | chr2:78754455-78754959 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 188 |
| Conread position: | 1-521 |
| Cow position: | chr2:78754706-78755211 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-529 |
| Cow position: | chr2:78755195-78755719 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 142 |
| Conread position: | 2-431 |
| Cow position: | chr2:86465798-86466225 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 126, 102 |
| Conread position: | 2-519 |
| Cow position: | chr2:82799890-82800407 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 345 |
| Conread position: | 3-520 |
| Cow position: | chr2:82799470-82799988 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 4-516 |
| Cow position: | chr2:86465128-86465640 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 126 |
| Conread position: | 21-517 |
| Cow position: | chr2:86464977-86465473 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 35-519 |
| Cow position: | chr2:86465245-86465727 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 308 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 315, 5 |
| Conread position: | 35-520 |
| Cow position: | chr2:78754809-78755294 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-489 |
| Cow position: | chr2:5875035-5874583 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 39-530 |
| Cow position: | chr2:78755065-78755554 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 69 |
| Conread position: | 43-520 |
| Cow position: | chr2:86465335-86465812 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 255 |
| Conread position: | 43-520 |
| Cow position: | chr2:86465671-86466148 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 272, 263 |
| Conread position: | 46-516 |
| Cow position: | chr2:78754166-78754634 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 301 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 61-525 |
| Cow position: | chr2:82799447-82799909 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 11 |
| Conread position: | 144-516 |
| Cow position: | chr2:5875180-5874807 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 367, 0 |
Show alignments to all cow chromosomes.