Cow genome map

Conread name: rova012_h11.y1

Conread position: 1-283
Cow position:
Alignm length: 284
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 111

Conread position: 1-303
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 98, 107

Conread position: 1-350
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-397
Cow position:
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-400
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 105

Conread position: 1-402
Cow position:
Alignm length: 406
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 1-426
Cow position:
Alignm length: 426
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-476
Cow position:
Alignm length: 476
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-480
Cow position:
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 106

Conread position: 1-484
Cow position:
Alignm length: 485
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 98

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 97

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 303
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 40

Conread position: 1-488
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-488
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-496
Cow position:
Alignm length: 497
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 355

Conread position: 1-496
Cow position:
Alignm length: 498
Alignm identity: 315
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 127, 97

Conread position: 1-496
Cow position:
Alignm length: 499
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 1-500
Cow position:
Alignm length: 503
Alignm identity: 314
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 28

Conread position: 1-515
Cow position:
Alignm length: 517
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 197

Conread position: 1-516
Cow position:
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-516
Cow position:
Alignm length: 521
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 113

Conread position: 1-517
Cow position:
Alignm length: 518
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 27

Conread position: 1-518
Cow position:
Alignm length: 521
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 97

Conread position: 1-518
Cow position:
Alignm length: 522
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 198

Conread position: 1-518
Cow position:
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 192

Conread position: 1-518
Cow position:
Alignm length: 535
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 1-518
Cow position:
Alignm length: 519
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 351

Conread position: 1-518
Cow position:
Alignm length: 518
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-518
Cow position:
Alignm length: 518
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-518
Cow position:
Alignm length: 518
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-518
Cow position:
Alignm length: 523
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 40

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 445

Conread position: 1-519
Cow position:
Alignm length: 520
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 360

Conread position: 1-519
Cow position:
Alignm length: 524
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 97

Conread position: 1-519
Cow position:
Alignm length: 521
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 269

Conread position: 1-520
Cow position:
Alignm length: 537
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 1-520
Cow position:
Alignm length: 522
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 355

Conread position: 1-520
Cow position:
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-520
Cow position:
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-522
Cow position:
Alignm length: 522
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-522
Cow position:
Alignm length: 524
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 121

Conread position: 1-524
Cow position:
Alignm length: 526
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 97

Conread position: 1-525
Cow position:
Alignm length: 526
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 270

Conread position: 1-525
Cow position:
Alignm length: 527
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 280

Conread position: 1-525
Cow position:
Alignm length: 525
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-525
Cow position:
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-529
Cow position:
Alignm length: 530
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 440

Conread position: 1-529
Cow position:
Alignm length: 529
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-529
Cow position:
Alignm length: 532
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 91

Conread position: 1-529
Cow position:
Alignm length: 530
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 439

Conread position: 1-529
Cow position:
Alignm length: 534
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 1-530
Cow position:
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 444

Conread position: 1-530
Cow position:
Alignm length: 531
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 183

Conread position: 2-527
Cow position:
Alignm length: 528
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 3-518
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 5-529
Cow position:
Alignm length: 526
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 101

Conread position: 5-530
Cow position:
Alignm length: 527
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 179

Conread position: 11-516
Cow position:
Alignm length: 506
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-523
Cow position:
Alignm length: 507
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 95

Conread position: 20-518
Cow position:
Alignm length: 502
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 339

Conread position: 20-521
Cow position:
Alignm length: 519
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 20-530
Cow position:
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 163

Conread position: 23-523
Cow position:
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 142

Conread position: 27-517
Cow position:
Alignm length: 495
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 28

Conread position: 27-524
Cow position:
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 86

Conread position: 27-527
Cow position:
Alignm length: 504
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 71

Conread position: 31-517
Cow position:
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 37-516
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 72

Conread position: 37-518
Cow position:
Alignm length: 486
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 170

Conread position: 37-524
Cow position:
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 231

Conread position: 37-524
Cow position:
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 231

Conread position: 37-525
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 240

Conread position: 37-530
Cow position:
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 38-319
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 65

Conread position: 38-516
Cow position:
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-519
Cow position:
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 171

Conread position: 38-524
Cow position:
Alignm length: 487
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-524
Cow position:
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 39-518
Cow position:
Alignm length: 487
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 152

Conread position: 39-529
Cow position:
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-518
Cow position:
Alignm length: 480
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 55

Conread position: 43-518
Cow position:
Alignm length: 480
Alignm identity: 293
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 62, 71

Conread position: 43-519
Cow position:
Alignm length: 480
Alignm identity: 297
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 74, 55

Conread position: 43-521
Cow position:
Alignm length: 485
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 70

Conread position: 44-523
Cow position:
Alignm length: 482
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 235

Conread position: 47-518
Cow position:
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 151

Conread position: 56-518
Cow position:
Alignm length: 464
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 229

Conread position: 61-516
Cow position:
Alignm length: 461
Alignm identity: 289
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 53

Conread position: 68-517
Cow position:
Alignm length: 451
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 368

Conread position: 68-519
Cow position:
Alignm length: 455
Alignm identity: 270
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 55

Conread position: 68-521
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 71

Conread position: 72-519
Cow position:
Alignm length: 453
Alignm identity: 289
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 123, 129

Conread position: 122-521
Cow position:
Alignm length: 402
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 244

Conread position: 130-521
Cow position:
Alignm length: 396
Alignm identity: 249
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 68

Conread position: 134-520
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 50

Conread position: 137-387
Cow position:
Alignm length: 253
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 142, 126

Conread position: 146-529
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 55

Conread position: 191-518
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 236-522
Cow position:
Alignm length: 288
Alignm identity: 185
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 71

Show alignments to all cow chromosomes.