Cow genome map
| Conread name: | rova012_h11.y1 |
| Conread position: | 1-342 |
| Cow position: | chr3:62743118-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 103 |
| Conread position: | 1-398 |
| Cow position: | chr3:68045963-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 0 |
| Conread position: | 1-399 |
| Cow position: | chr3:62743039-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-484 |
| Cow position: | chr3:62722047-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-511 |
| Cow position: | chr3:77351130-77350631 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 1-519 |
| Cow position: | chr3:62742888-62743384 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-520 |
| Cow position: | chr3:62722215-62721696 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-520 |
| Cow position: | chr3:62722299-62721780 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-522 |
| Cow position: | chr3:62742721-62743219 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 1-529 |
| Cow position: | chr3:62722131-62721603 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-529 |
| Cow position: | chr3:68027202-68027730 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 1-530 |
| Cow position: | chr3:68045711-68046240 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-530 |
| Cow position: | chr3:68045795-68046324 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 2-530 |
| Cow position: | chr3:62742389-62742913 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 85 |
| Conread position: | 3-521 |
| Cow position: | chr3:62722381-62721863 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 4-480 |
| Cow position: | chr3:68045882-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 25-519 |
| Cow position: | chr3:68027058-68027552 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-519 |
| Cow position: | chr3:68045651-68046145 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 327 |
| Conread position: | 27-516 |
| Cow position: | chr3:62742498-62742983 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 143 |
| Conread position: | 30-219 |
| Cow position: | chr3:68027568-68027756 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 30-526 |
| Cow position: | chr3:62742249-62742742 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 37-402 |
| Cow position: | chr3:68027406-68027769 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 38-398 |
| Cow position: | chr3:77350933-77350576 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 40-530 |
| Cow position: | chr3:68026990-68027479 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 57-525 |
| Cow position: | chr3:68045599-68046067 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 310 |
| Conread position: | 79-519 |
| Cow position: | chr3:62743033-62743468 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 83 |
| Conread position: | 130-529 |
| Cow position: | chr3:62722339-62721939 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 288-530 |
| Cow position: | chr3:62742256-62742497 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 309-530 |
| Cow position: | chr3:68045599-68045820 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 57 |
Show alignments to all cow chromosomes.