Cow genome map

Conread name: rova012_h11.y1

Conread position: 1-297
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 18

Conread position: 1-310
Cow position:
Alignm length: 314
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 286, 278

Conread position: 1-389
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-451
Cow position:
Alignm length: 451
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-473
Cow position:
Alignm length: 474
Alignm identity: 274
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 25

Conread position: 1-484
Cow position:
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 122

Conread position: 1-516
Cow position:
Alignm length: 520
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 448

Conread position: 1-516
Cow position:
Alignm length: 519
Alignm identity: 306
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 31

Conread position: 1-516
Cow position:
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-517
Cow position:
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 1-517
Cow position:
Alignm length: 519
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 268

Conread position: 1-517
Cow position:
Alignm length: 517
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-518
Cow position:
Alignm length: 521
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 93

Conread position: 1-518
Cow position:
Alignm length: 519
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 97

Conread position: 1-519
Cow position:
Alignm length: 519
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-519
Cow position:
Alignm length: 519
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-521
Cow position:
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 429

Conread position: 1-521
Cow position:
Alignm length: 525
Alignm identity: 322
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 122

Conread position: 1-521
Cow position:
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 1-522
Cow position:
Alignm length: 523
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 270

Conread position: 1-523
Cow position:
Alignm length: 526
Alignm identity: 331
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 123, 106

Conread position: 1-523
Cow position:
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-525
Cow position:
Alignm length: 529
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 107

Conread position: 1-526
Cow position:
Alignm length: 530
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 96

Conread position: 1-530
Cow position:
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 97

Conread position: 1-530
Cow position:
Alignm length: 531
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 383

Conread position: 2-517
Cow position:
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-517
Cow position:
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 96

Conread position: 2-522
Cow position:
Alignm length: 523
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 434

Conread position: 5-519
Cow position:
Alignm length: 516
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 445

Conread position: 5-519
Cow position:
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 93

Conread position: 5-526
Cow position:
Alignm length: 523
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 261

Conread position: 20-529
Cow position:
Alignm length: 510
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-180
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 25-530
Cow position:
Alignm length: 507
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 90

Conread position: 27-524
Cow position:
Alignm length: 499
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 212

Conread position: 28-435
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 106, 71

Conread position: 28-525
Cow position:
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-518
Cow position:
Alignm length: 491
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 34-530
Cow position:
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 60

Conread position: 36-516
Cow position:
Alignm length: 488
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 141

Conread position: 36-516
Cow position:
Alignm length: 482
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 74

Conread position: 37-438
Cow position:
Alignm length: 403
Alignm identity: 245
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 148

Conread position: 37-438
Cow position:
Alignm length: 402
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 37-519
Cow position:
Alignm length: 484
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 132

Conread position: 37-520
Cow position:
Alignm length: 487
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 170

Conread position: 37-521
Cow position:
Alignm length: 488
Alignm identity: 302
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 87, 70

Conread position: 37-521
Cow position:
Alignm length: 490
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 37-521
Cow position:
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 69

Conread position: 37-521
Cow position:
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 78

Conread position: 37-521
Cow position:
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 62

Conread position: 37-523
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 37-523
Cow position:
Alignm length: 492
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 67

Conread position: 37-530
Cow position:
Alignm length: 497
Alignm identity: 318
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 206, 61

Conread position: 38-517
Cow position:
Alignm length: 482
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 320

Conread position: 38-519
Cow position:
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 76

Conread position: 39-491
Cow position:
Alignm length: 456
Alignm identity: 286
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 59

Conread position: 42-471
Cow position:
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 56

Conread position: 54-523
Cow position:
Alignm length: 474
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 151

Conread position: 54-523
Cow position:
Alignm length: 474
Alignm identity: 301
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 66

Conread position: 55-521
Cow position:
Alignm length: 472
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 59-520
Cow position:
Alignm length: 462
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 60-526
Cow position:
Alignm length: 472
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 109

Conread position: 61-530
Cow position:
Alignm length: 472
Alignm identity: 278
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 37

Conread position: 64-521
Cow position:
Alignm length: 460
Alignm identity: 287
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 43

Conread position: 74-521
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 139-511
Cow position:
Alignm length: 379
Alignm identity: 236
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 44

Conread position: 240-530
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 197, 209

Conread position: 283-530
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 14

Conread position: 285-523
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 317-523
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 143, 126

Show alignments to all cow chromosomes.