Cow genome map
| Conread name: | rova012_h11.y1 |
| Conread position: | 1-212 |
| Cow position: | chr8:46817163-46817374 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 1-350 |
| Cow position: | chr8:48406596-48406238 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 272, 279 |
| Conread position: | 1-426 |
| Cow position: | chr8:45201548-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-434 |
| Cow position: | chr8:46816911-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 350 |
| Conread position: | 1-493 |
| Cow position: | chr8:55581268-55581760 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 1-516 |
| Cow position: | chr8:45200960-45201475 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 1-516 |
| Cow position: | chr8:46816071-46816586 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 237 |
| Conread position: | 1-516 |
| Cow position: | chr8:46816491-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-516 |
| Cow position: | chr8:46816659-46817174 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-516 |
| Cow position: | chr8:48407268-48406752 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 101 |
| Conread position: | 1-516 |
| Cow position: | chr8:55581100-55581616 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 353 |
| Conread position: | 1-517 |
| Cow position: | chr8:46816155-46816671 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 359 |
| Conread position: | 1-517 |
| Cow position: | chr8:55580932-55581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 450 |
| Conread position: | 1-518 |
| Cow position: | chr8:46816239-46816756 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 91 |
| Conread position: | 1-518 |
| Cow position: | chr8:46816323-46816840 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-518 |
| Cow position: | chr8:46816407-46816924 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 97 |
| Conread position: | 1-518 |
| Cow position: | chr8:46816575-46817092 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 238 |
| Conread position: | 1-518 |
| Cow position: | chr8:55581184-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 444 |
| Conread position: | 1-519 |
| Cow position: | chr8:45201044-45201562 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 107 |
| Conread position: | 1-520 |
| Cow position: | chr8:48406848-48406329 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 94 |
| Conread position: | 1-520 |
| Cow position: | chr8:48407520-48407001 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 181 |
| Conread position: | 1-530 |
| Cow position: | chr8:55581016-55581545 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-520 |
| Cow position: | chr8:48407435-48406917 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 3-516 |
| Cow position: | chr8:46816828-46817343 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 430 |
| Conread position: | 28-520 |
| Cow position: | chr8:48407325-48406833 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 29-506 |
| Cow position: | chr8:48406736-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 30-530 |
| Cow position: | chr8:48407576-48407075 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 237 |
| Conread position: | 37-313 |
| Cow position: | chr8:46817115-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 225, 234 |
| Conread position: | 37-519 |
| Cow position: | chr8:45201164-45201646 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-519 |
| Cow position: | chr8:45201500-45201982 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-520 |
| Cow position: | chr8:45201248-45201731 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-520 |
| Cow position: | chr8:45201416-45201899 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-527 |
| Cow position: | chr8:45201668-45202148 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 320 |
| Conread position: | 38-519 |
| Cow position: | chr8:45201333-45201814 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-524 |
| Cow position: | chr8:45200829-45201315 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 38-530 |
| Cow position: | chr8:55580885-55581377 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-525 |
| Cow position: | chr8:46815940-46816427 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 42-516 |
| Cow position: | chr8:48407647-48407172 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 42-519 |
| Cow position: | chr8:55580805-55581282 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 72 |
| Conread position: | 49-518 |
| Cow position: | chr8:46816035-46816504 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 58-530 |
| Cow position: | chr8:55580736-55581209 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 61-518 |
| Cow position: | chr8:45200936-45201393 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 80-505 |
| Cow position: | chr8:6958059-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 270, 288 |
| Conread position: | 116-521 |
| Cow position: | chr8:48407657-48407252 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-518 |
| Cow position: | chr8:45200826-45201225 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 188 |
| Conread position: | 167-512 |
| Cow position: | chr8:6958056-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 341, 269 |
| Conread position: | 171-520 |
| Cow position: | chr8:45200793-45201143 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 185-499 |
| Cow position: | chr8:48407673-48407358 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 251-516 |
| Cow position: | chr8:6958056-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.