Cow genome map
Conread name: | rova012_h11.y1 |
Conread position: | 1-419 |
Cow position: | chrX:29045066-29044648 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-430 |
Cow position: | chrX:29045801-29045372 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 30 |
Conread position: | 1-485 |
Cow position: | chrX:25324721-25324237 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 102 |
Conread position: | 1-497 |
Cow position: | chrX:29045150-29044654 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 38 |
Conread position: | 1-515 |
Cow position: | chrX:25325141-25324626 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 512, 0 |
Conread position: | 1-517 |
Cow position: | chrX:13826922-13826406 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 314 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 105, 113 |
Conread position: | 1-518 |
Cow position: | chrX:25324973-25324456 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-518 |
Cow position: | chrX:25325393-25324876 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 97 |
Conread position: | 1-518 |
Cow position: | chrX:25325645-25325128 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-519 |
Cow position: | chrX:25309748-25310266 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 9 |
Conread position: | 1-520 |
Cow position: | chrX:29045234-29044715 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-520 |
Cow position: | chrX:29045318-29044799 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 33 |
Conread position: | 1-523 |
Cow position: | chrX:25325477-25324955 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 183 |
Conread position: | 1-529 |
Cow position: | chrX:25325561-25325033 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-303 |
Cow position: | chrX:14181195-14180894 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 190 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 232, 226 |
Conread position: | 2-516 |
Cow position: | chrX:25325308-25324794 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-517 |
Cow position: | chrX:13826753-13826238 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 313 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 11, 101 |
Conread position: | 3-518 |
Cow position: | chrX:25324888-25324372 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 3-518 |
Cow position: | chrX:25325224-25324708 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 358 |
Conread position: | 3-525 |
Cow position: | chrX:25325056-25324533 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 365 |
Conread position: | 5-520 |
Cow position: | chrX:25309836-25310351 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 94 |
Conread position: | 18-517 |
Cow position: | chrX:25309933-25310432 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 85 |
Conread position: | 18-518 |
Cow position: | chrX:25325711-25325212 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 5 |
Conread position: | 26-517 |
Cow position: | chrX:14181507-14181016 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 296 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 14, 6 |
Conread position: | 30-511 |
Cow position: | chrX:25309693-25310174 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 68 |
Conread position: | 32-520 |
Cow position: | chrX:29045368-29044883 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 37-414 |
Cow position: | chrX:25310204-25310581 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 77 |
Conread position: | 37-495 |
Cow position: | chrX:25310120-25310578 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 77 |
Conread position: | 37-518 |
Cow position: | chrX:25324769-25324288 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 323 |
Conread position: | 38-422 |
Cow position: | chrX:14181327-14180943 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 231 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 68, 54 |
Conread position: | 38-518 |
Cow position: | chrX:25325776-25325296 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 39-516 |
Cow position: | chrX:12627586-12628062 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 63 |
Conread position: | 49-506 |
Cow position: | chrX:29045837-29045380 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 52 |
Conread position: | 67-518 |
Cow position: | chrX:12627279-12627728 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 275 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 28, 43 |
Conread position: | 74-518 |
Cow position: | chrX:13826933-13826489 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 273 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 41, 36 |
Conread position: | 88-516 |
Cow position: | chrX:25309667-25310095 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 21 |
Conread position: | 135-516 |
Cow position: | chrX:25325847-25325466 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 240 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 16, 9 |
Conread position: | 138-516 |
Cow position: | chrX:29045832-29045454 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 185-516 |
Cow position: | chrX:25325881-25325550 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 198 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.