Cow genome map

Conread name: rova030_m24.y1

Conread position: 177-529
Cow position: chr14:447873-448224 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 212
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 6

Conread position: 177-606
Cow position: chr14:3101136-3100713 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 269
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 203, 6

Conread position: 177-607
Cow position: chr14:25877358-25877788 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 259
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 14

Conread position: 178-437
Cow position: chr14:3079974-3079715 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 13

Conread position: 178-605
Cow position: chr14:3127906-3127480 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 0

Conread position: 178-610
Cow position: chr14:680843-681275 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 273
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 175, 192

Conread position: 178-625
Cow position: chr14:447621-448068 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 275
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 13

Conread position: 178-626
Cow position: chr14:680255-680703 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 266
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 13

Conread position: 178-626
Cow position: chr14:3101220-3100777 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 274
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 362, 159

Conread position: 181-626
Cow position: chr14:3080895-3080450 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 183-606
Cow position: chr14:25859977-25860400 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 256
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 26

Conread position: 183-607
Cow position: chr14:3080725-3080301 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 271
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 8

Conread position: 183-613
Cow position: chr14:25836252-25836682 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 267
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 183-618
Cow position: chr14:680764-681199 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 183-624
Cow position: chr14:25836672-25837113 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 264
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 8

Conread position: 183-626
Cow position: chr14:3080809-3080366 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 280
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 8

Conread position: 184-626
Cow position: chr14:3127984-3127542 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 175

Conread position: 194-606
Cow position: chr14:3127723-3127310 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 197-623
Cow position: chr14:25836350-25836776 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 263
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 172, 164

Conread position: 199-605
Cow position: chr14:25783481-25783887 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 82

Conread position: 199-605
Cow position: chr14:25794709-25794302 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 258
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 325, 345

Conread position: 199-607
Cow position: chr14:25859825-25860233 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 255
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 133, 129

Conread position: 202-607
Cow position: chr14:25836776-25837180 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 245
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 175, 6

Conread position: 202-612
Cow position: chr14:25859913-25860322 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 262
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 6

Conread position: 208-605
Cow position: chr14:25794868-25794471 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 158, 166

Conread position: 208-607
Cow position: chr14:25836445-25836844 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 244
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 70

Conread position: 208-607
Cow position: chr14:25859582-25859981 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 235
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 208-613
Cow position: chr14:680369-680774 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 248
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 27

Conread position: 209-563
Cow position: chr14:3156129-3156483 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 160, 147

Conread position: 209-565
Cow position: chr14:3100690-3100336 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 171, 150

Conread position: 209-572
Cow position: chr14:3155472-3155835 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 339, 321

Conread position: 209-605
Cow position: chr14:25783827-25784223 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 231, 238

Conread position: 209-613
Cow position: chr14:3101440-3101038 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 259
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 74

Conread position: 209-614
Cow position: chr14:3155961-3156366 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 260
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 160, 146

Conread position: 209-616
Cow position: chr14:3061678-3061271 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 246
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 146

Conread position: 209-626
Cow position: chr14:447568-447985 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 267
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 242, 249

Conread position: 209-626
Cow position: chr14:3080279-3079862 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 210-578
Cow position: chr14:25794530-25794160 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 229
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 161, 146

Conread position: 211-438
Cow position: chr14:25784417-25784644 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 155, 159

Conread position: 211-599
Cow position: chr14:25783997-25784385 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 247
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 70

Conread position: 211-599
Cow position: chr14:25784249-25784637 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 68

Conread position: 211-599
Cow position: chr14:25795033-25794645 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 70

Conread position: 211-605
Cow position: chr14:25783325-25783719 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 155, 159

Conread position: 211-605
Cow position: chr14:25783661-25784055 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 247
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 159

Conread position: 211-605
Cow position: chr14:25783745-25784138 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 68

Conread position: 211-605
Cow position: chr14:25784081-25784475 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 247
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 159

Conread position: 211-605
Cow position: chr14:25795201-25794807 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 241
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 148, 163

Conread position: 211-605
Cow position: chr14:25795285-25794891 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 247
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 155, 160

Conread position: 211-605
Cow position: chr14:25859417-25859811 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 244
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 158, 149

Conread position: 211-606
Cow position: chr14:25859249-25859644 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 233
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 149

Conread position: 211-607
Cow position: chr14:25783409-25783805 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 253
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 161, 152

Conread position: 211-608
Cow position: chr14:25876384-25876781 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 246
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 66

Conread position: 211-608
Cow position: chr14:25910896-25911293 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 121, 117

Conread position: 211-612
Cow position: chr14:25836196-25836597 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 246
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 156, 145

Conread position: 211-612
Cow position: chr14:25876972-25877373 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 256
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 77, 82

Conread position: 211-612
Cow position: chr14:25894846-25895244 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 243
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 66

Conread position: 211-613
Cow position: chr14:25876720-25877122 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 160, 150

Conread position: 211-623
Cow position: chr14:25876804-25877216 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 66

Conread position: 211-632
Cow position: chr14:25836616-25837037 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 261
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 160, 149

Conread position: 215-606
Cow position: chr14:3100852-3100461 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 239
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 324, 310

Conread position: 222-612
Cow position: chr14:25876227-25876617 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 240
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 147, 134

Conread position: 231-605
Cow position: chr14:25876572-25876946 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 230
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 91

Conread position: 231-606
Cow position: chr14:25836552-25836927 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 138, 130

Conread position: 231-607
Cow position: chr14:25859353-25859729 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 238
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 101, 93

Conread position: 231-607
Cow position: chr14:25877328-25877704 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 227
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 130

Conread position: 231-613
Cow position: chr14:3128105-3127723 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 149, 144

Conread position: 231-613
Cow position: chr14:3155410-3155792 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 137, 124

Conread position: 231-623
Cow position: chr14:25859773-25860165 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 245
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 62

Conread position: 231-624
Cow position: chr14:3127769-3127376 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 232-599
Cow position: chr14:3080508-3080141 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 140, 128

Conread position: 232-606
Cow position: chr14:25794760-25794386 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 40

Conread position: 232-606
Cow position: chr14:25836049-25836423 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 139, 132

Conread position: 232-607
Cow position: chr14:25895956-25896331 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 221
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 232-612
Cow position: chr14:3080088-3079708 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 232-612
Cow position: chr14:25860194-25860574 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 234
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 50

Conread position: 232-612
Cow position: chr14:25877245-25877625 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 231
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 50

Conread position: 232-612
Cow position: chr14:25895200-25895580 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 226
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 64

Conread position: 232-613
Cow position: chr14:25895872-25896253 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 228
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 64

Conread position: 232-615
Cow position: chr14:3061235-3060852 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 149, 142

Conread position: 232-623
Cow position: chr14:25910833-25911224 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 237
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 144

Conread position: 232-624
Cow position: chr14:25895032-25895424 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 235
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 63

Conread position: 232-625
Cow position: chr14:3155900-3156293 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 131

Conread position: 234-605
Cow position: chr14:25795346-25794975 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 228
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 38

Conread position: 247-607
Cow position: chr14:3128173-3127813 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 253-612
Cow position: chr14:25895473-25895832 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 218
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 128, 121

Conread position: 253-613
Cow position: chr14:680498-680858 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 122, 153

Conread position: 253-613
Cow position: chr14:680750-681110 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 253-626
Cow position: chr14:680582-680955 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 233
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 119, 107

Conread position: 255-612
Cow position: chr14:25895559-25895916 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 219
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 35

Conread position: 256-632
Cow position: chr14:25895392-25895768 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 228
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 34

Conread position: 295-605
Cow position: chr14:25795453-25795143 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 60

Conread position: 295-606
Cow position: chr14:433959-434270 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 65

Conread position: 295-606
Cow position: chr14:25795033-25794722 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 190
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 69

Conread position: 304-611
Cow position: chr14:25859258-25859565 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 56

Conread position: 307-607
Cow position: chr14:25895863-25896163 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 53

Conread position: 307-612
Cow position: chr14:3080097-3079792 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 53

Conread position: 313-615
Cow position: chr14:3155408-3155710 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 50

Conread position: 316-626
Cow position: chr14:3155900-3156210 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 370-607
Cow position: chr14:25836103-25836340 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 94

Conread position: 378-626
Cow position: chr14:3155389-3155637 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.