Cow genome map
| Conread name: | rova030_m24.y1 |
| Conread position: | 18-626 |
| Cow position: | chr17:22553316-22552708 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 428 |
| Conread position: | 176-613 |
| Cow position: | chr17:22473449-22473885 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 176-618 |
| Cow position: | chr17:22590156-22589714 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-626 |
| Cow position: | chr17:22551982-22551532 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 183 |
| Conread position: | 177-517 |
| Cow position: | chr17:22452014-22451674 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 177-614 |
| Cow position: | chr17:22452181-22451745 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 177-625 |
| Cow position: | chr17:22552653-22552205 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 182 |
| Conread position: | 177-625 |
| Cow position: | chr17:22589734-22589287 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 7 |
| Conread position: | 177-632 |
| Cow position: | chr17:22590238-22589784 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 178-426 |
| Cow position: | chr17:22551728-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 178-605 |
| Cow position: | chr17:22589902-22589475 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-606 |
| Cow position: | chr17:22589650-22589222 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-607 |
| Cow position: | chr17:22473366-22473795 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 178-618 |
| Cow position: | chr17:22553072-22552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 281 |
| Conread position: | 178-624 |
| Cow position: | chr17:22589986-22589540 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 188 |
| Conread position: | 178-632 |
| Cow position: | chr17:22552820-22552366 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-632 |
| Cow position: | chr17:22590070-22589616 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-606 |
| Cow position: | chr17:22552310-22551888 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 187 |
| Conread position: | 203-605 |
| Cow position: | chr17:22552711-22552310 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 156 |
| Conread position: | 203-607 |
| Cow position: | chr17:22499170-22498766 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 209-618 |
| Cow position: | chr17:22590291-22589882 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 230 |
| Conread position: | 210-626 |
| Cow position: | chr17:22452233-22451817 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 144, 161 |
| Conread position: | 211-415 |
| Cow position: | chr17:22498742-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-489 |
| Cow position: | chr17:22589449-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 211-510 |
| Cow position: | chr17:22551779-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 117 |
| Conread position: | 211-578 |
| Cow position: | chr17:22551863-22551496 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 234 |
| Conread position: | 211-599 |
| Cow position: | chr17:22499330-22498942 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 149 |
| Conread position: | 211-607 |
| Cow position: | chr17:22452400-22452004 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 157, 135 |
| Conread position: | 211-614 |
| Cow position: | chr17:22552955-22552552 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 160 |
| Conread position: | 211-618 |
| Cow position: | chr17:22552031-22551624 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 148 |
| Conread position: | 211-623 |
| Cow position: | chr17:22552451-22552039 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-626 |
| Cow position: | chr17:22452316-22451901 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 149 |
| Conread position: | 211-626 |
| Cow position: | chr17:22552871-22552456 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-632 |
| Cow position: | chr17:22552115-22551694 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 211-632 |
| Cow position: | chr17:22552199-22551778 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 211-632 |
| Cow position: | chr17:22552367-22551946 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 248 |
| Conread position: | 211-632 |
| Cow position: | chr17:22552535-22552114 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 231-604 |
| Cow position: | chr17:22589765-22589392 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-605 |
| Cow position: | chr17:22499393-22499020 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 233-606 |
| Cow position: | chr17:41440616-41440243 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 137, 127 |
| Conread position: | 241-607 |
| Cow position: | chr17:22473261-22473627 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 138, 115 |
| Conread position: | 252-632 |
| Cow position: | chr17:22553166-22552786 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 286-613 |
| Cow position: | chr17:22452409-22452082 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 85 |
Show alignments to all cow chromosomes.