Cow genome map


           Conread name:
           rova030_m24.y1
        

               Conread position:
               161-606
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 199
               

               Conread position:
               176-607
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 33
               

               Conread position:
               177-602
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 187
               

               Conread position:
               177-607
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               177-607
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               101, 7
               

               Conread position:
               177-613
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               282
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               177-613
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               177-618
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               279
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               177-626
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               178-521
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 113
               

               Conread position:
               178-607
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               118, 113
               

               Conread position:
               178-608
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               178-614
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               178-625
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               191, 182
               

               Conread position:
               178-626
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               183-601
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               267
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               17, 8
               

               Conread position:
               184-613
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 181
               

               Conread position:
               185-482
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               219, 24
               

               Conread position:
               193-607
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 83
               

               Conread position:
               202-607
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               168, 153
               

               Conread position:
               202-607
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 169
               

               Conread position:
               202-626
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 159
               

               Conread position:
               203-606
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               153, 167
               

               Conread position:
               203-612
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               88, 93
               

               Conread position:
               203-614
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 152
               

               Conread position:
               203-619
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 156
               

               Conread position:
               203-624
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               163, 157
               

               Conread position:
               205-632
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 155
               

               Conread position:
               209-529
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               161, 151
               

               Conread position:
               209-573
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               161, 147
               

               Conread position:
               209-605
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               158, 146
               

               Conread position:
               209-623
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               162, 150
               

               Conread position:
               209-626
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               160, 151
               

               Conread position:
               210-490
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 81
               

               Conread position:
               210-587
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               210-605
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               159, 150
               

               Conread position:
               210-607
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 141
               

               Conread position:
               211-437
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-523
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               160, 58
               

               Conread position:
               211-564
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               161, 145
               

               Conread position:
               211-572
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               96, 88
               

               Conread position:
               211-575
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               326, 314
               

               Conread position:
               211-593
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               211-605
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 149
               

               Conread position:
               211-605
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               159, 150
               

               Conread position:
               211-605
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 150
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               161, 80
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 133
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               161, 153
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-608
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               211-608
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               157, 149
               

               Conread position:
               211-612
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               228, 92
               

               Conread position:
               211-613
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               211-623
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 226
               

               Conread position:
               211-626
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               263
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               160, 149
               

               Conread position:
               211-626
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 159
               

               Conread position:
               214-611
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               214-618
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               215-550
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-607
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               150, 161
               

               Conread position:
               217-601
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               219-609
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               231-499
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 133
               

               Conread position:
               231-508
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 124
               

               Conread position:
               231-607
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               231-607
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               152, 123
               

               Conread position:
               231-626
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               135, 129
               

               Conread position:
               232-593
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 138
               

               Conread position:
               234-626
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               136, 121
               

               Conread position:
               242-607
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               253-623
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               119, 110
               

               Conread position:
               304-607
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               306-623
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               239, 219
               

               Conread position:
               311-613
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 17
               

               Conread position:
               313-626
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               315-612
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               340-609
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               370-608
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.