Cow genome map
| Conread name: | rova030_m24.y1 |
| Conread position: | 173-606 |
| Cow position: | chr2:86465124-86465557 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 175-600 |
| Cow position: | chr2:78754624-78755033 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 177-616 |
| Cow position: | chr2:78755365-78755802 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 195, 154 |
| Conread position: | 177-624 |
| Cow position: | chr2:78755114-78755559 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 194 |
| Conread position: | 177-626 |
| Cow position: | chr2:78755031-78755478 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 178-432 |
| Cow position: | chr2:82800145-82800399 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 178-523 |
| Cow position: | chr2:86465801-86466146 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 178-605 |
| Cow position: | chr2:82799809-82800236 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 178-626 |
| Cow position: | chr2:78755199-78755645 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 138 |
| Conread position: | 183-614 |
| Cow position: | chr2:82799562-82799993 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 183-615 |
| Cow position: | chr2:5875146-5874714 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 192, 177 |
| Conread position: | 183-626 |
| Cow position: | chr2:78754214-78754655 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 196, 167 |
| Conread position: | 183-626 |
| Cow position: | chr2:78754952-78755394 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 109 |
| Conread position: | 184-605 |
| Cow position: | chr2:86465051-86465471 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 184-607 |
| Cow position: | chr2:86465723-86466146 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 201, 171 |
| Conread position: | 193-596 |
| Cow position: | chr2:82799655-82800059 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 257 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 7, 179 |
| Conread position: | 203-613 |
| Cow position: | chr2:82799750-82800160 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 165, 153 |
| Conread position: | 203-626 |
| Cow position: | chr2:5874874-5874451 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 177, 171 |
| Conread position: | 203-626 |
| Cow position: | chr2:5875042-5874619 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 411, 418 |
| Conread position: | 209-529 |
| Cow position: | chr2:82800092-82800412 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 159, 146 |
| Conread position: | 210-607 |
| Cow position: | chr2:82799505-82799902 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 211-531 |
| Cow position: | chr2:5874446-5874126 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 134, 151 |
| Conread position: | 211-607 |
| Cow position: | chr2:78754812-78755208 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 153 |
| Conread position: | 211-614 |
| Cow position: | chr2:78754896-78755299 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-614 |
| Cow position: | chr2:78755816-78756220 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 257 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 211-618 |
| Cow position: | chr2:78754410-78754811 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 211-626 |
| Cow position: | chr2:5874614-5874199 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 211-626 |
| Cow position: | chr2:78755566-78755979 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 158, 99 |
| Conread position: | 212-574 |
| Cow position: | chr2:78756070-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 216-605 |
| Cow position: | chr2:78755905-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 209 |
| Conread position: | 216-607 |
| Cow position: | chr2:86465671-86466062 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 170, 194 |
| Conread position: | 219-600 |
| Cow position: | chr2:86465254-86465635 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 73 |
| Conread position: | 232-600 |
| Cow position: | chr2:78754180-78754545 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 232-614 |
| Cow position: | chr2:5874929-5874547 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 232-616 |
| Cow position: | chr2:5874677-5874293 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 233-523 |
| Cow position: | chr2:86465940-86466228 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 233-624 |
| Cow position: | chr2:5875180-5874789 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-613 |
| Cow position: | chr2:82799451-82799824 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 208, 193 |
| Conread position: | 247-613 |
| Cow position: | chr2:82800046-82800412 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 119, 123 |
| Conread position: | 253-597 |
| Cow position: | chr2:5874740-5874396 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 297-613 |
| Cow position: | chr2:48689392-48689076 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 227, 241 |
| Conread position: | 379-626 |
| Cow position: | chr2:82799506-82799753 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 67 |
Show alignments to all cow chromosomes.