Cow genome map

Conread name: rova030_m24.y1

Conread position: 175-626
Cow position: chr22:12476108-12475658 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 176-625
Cow position: chr22:12499152-12499600 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 280
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 8

Conread position: 177-406
Cow position: chr22:12475519-12475290 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 18

Conread position: 177-542
Cow position: chr22:12418829-12418464 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 203, 186

Conread position: 177-601
Cow position: chr22:12458409-12457986 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 194, 7

Conread position: 177-609
Cow position: chr22:14468006-14468437 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 275
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 7

Conread position: 177-614
Cow position: chr22:11640889-11641325 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 275
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 6

Conread position: 177-616
Cow position: chr22:12458494-12458055 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 274
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 18

Conread position: 177-619
Cow position: chr22:12399393-12398952 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 178-605
Cow position: chr22:11640721-11641147 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 273
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 33

Conread position: 178-632
Cow position: chr22:12431541-12431087 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 186

Conread position: 183-601
Cow position: chr22:12399640-12399222 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 188, 172

Conread position: 183-605
Cow position: chr22:12399221-12398798 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 182

Conread position: 183-626
Cow position: chr22:12399556-12399113 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 184-623
Cow position: chr22:12431283-12430844 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 283
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 188, 176

Conread position: 184-623
Cow position: chr22:12431787-12431348 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 277
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 172, 184

Conread position: 194-625
Cow position: chr22:12418981-12418549 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 274
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 168

Conread position: 197-613
Cow position: chr22:12499088-12499504 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 174, 164

Conread position: 197-614
Cow position: chr22:12476171-12475754 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 238

Conread position: 202-487
Cow position: chr22:11666670-11666955 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 178
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 262, 235

Conread position: 202-523
Cow position: chr22:11701324-11701645 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 73

Conread position: 202-596
Cow position: chr22:12399867-12399479 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 29

Conread position: 202-605
Cow position: chr22:12431433-12431030 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 202-607
Cow position: chr22:14467947-14468351 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 253
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 9

Conread position: 203-606
Cow position: chr22:12476333-12475930 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 143

Conread position: 203-613
Cow position: chr22:12432104-12431694 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 157, 167

Conread position: 203-623
Cow position: chr22:12385444-12385022 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 76

Conread position: 205-489
Cow position: chr22:12458046-12457762 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 151, 167

Conread position: 206-607
Cow position: chr22:11640665-11641066 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 248
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 208-520
Cow position: chr22:12458127-12457815 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 208-605
Cow position: chr22:12431931-12431534 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 260
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 68

Conread position: 208-607
Cow position: chr22:12475908-12475509 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 158, 163

Conread position: 208-612
Cow position: chr22:12475740-12475336 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 156

Conread position: 208-612
Cow position: chr22:12499519-12499923 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 236

Conread position: 208-613
Cow position: chr22:12431007-12430602 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 243
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 79

Conread position: 208-626
Cow position: chr22:12431679-12431261 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 263
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 208-626
Cow position: chr22:12476412-12475994 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 162

Conread position: 208-626
Cow position: chr22:12499351-12499769 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 162

Conread position: 209-438
Cow position: chr22:12399026-12398797 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 69

Conread position: 209-523
Cow position: chr22:11641088-11641402 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 84

Conread position: 209-626
Cow position: chr22:12385606-12385187 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 146

Conread position: 209-626
Cow position: chr22:12399698-12399281 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 162

Conread position: 211-523
Cow position: chr22:12385266-12384954 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 71

Conread position: 211-572
Cow position: chr22:12475653-12475292 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 57, 67

Conread position: 211-572
Cow position: chr22:12499606-12499967 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 67

Conread position: 211-600
Cow position: chr22:12431172-12430783 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 225, 244

Conread position: 211-604
Cow position: chr22:12458208-12457815 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 244, 230

Conread position: 211-606
Cow position: chr22:12498934-12499329 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 133

Conread position: 211-607
Cow position: chr22:11701249-11701645 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 245
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 32

Conread position: 211-607
Cow position: chr22:46654329-46654725 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 71, 62

Conread position: 211-608
Cow position: chr22:12431844-12431447 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 161, 149

Conread position: 211-609
Cow position: chr22:14429878-14430276 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 253
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 72, 85

Conread position: 211-613
Cow position: chr22:12458292-12457890 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 159

Conread position: 211-614
Cow position: chr22:46654077-46654480 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 256
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 73

Conread position: 211-619
Cow position: chr22:12431340-12430930 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 257
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 392, 0

Conread position: 211-623
Cow position: chr22:12385688-12385274 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 211-623
Cow position: chr22:12399276-12398864 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 149

Conread position: 211-624
Cow position: chr22:12399780-12399367 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 271
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 63

Conread position: 211-624
Cow position: chr22:12432264-12431851 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 260
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 80

Conread position: 211-625
Cow position: chr22:12399444-12399030 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 149

Conread position: 211-626
Cow position: chr22:11641006-11641421 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 256
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 158, 150

Conread position: 211-626
Cow position: chr22:12498850-12499265 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 149

Conread position: 211-632
Cow position: chr22:46654161-46654580 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 62

Conread position: 212-610
Cow position: chr22:12458627-12458229 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 256
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 70, 65

Conread position: 219-607
Cow position: chr22:14430474-14430862 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 242
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 159, 149

Conread position: 228-605
Cow position: chr22:14429725-14430104 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 239
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 52

Conread position: 230-605
Cow position: chr22:46654010-46654387 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 45

Conread position: 231-600
Cow position: chr22:12458524-12458155 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 231-607
Cow position: chr22:12385330-12384954 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 48

Conread position: 231-607
Cow position: chr22:46654433-46654809 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 237
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 47

Conread position: 231-626
Cow position: chr22:12431572-12431177 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 246
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 47

Conread position: 232-601
Cow position: chr22:12475800-12475431 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 128

Conread position: 232-607
Cow position: chr22:14430067-14430442 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 233
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 52

Conread position: 232-623
Cow position: chr22:12432327-12431936 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 147, 134

Conread position: 232-626
Cow position: chr22:12431991-12431597 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 248
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 217, 204

Conread position: 232-626
Cow position: chr22:12432159-12431765 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 243
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 308, 296

Conread position: 232-626
Cow position: chr22:12432411-12432017 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 232-626
Cow position: chr22:12476220-12475826 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 46

Conread position: 233-626
Cow position: chr22:12475967-12475574 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 138, 130

Conread position: 233-626
Cow position: chr22:12499292-12499685 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 138, 128

Conread position: 242-607
Cow position: chr22:12419016-12418651 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 246-626
Cow position: chr22:12399907-12399533 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 76

Conread position: 247-605
Cow position: chr22:11640622-11640980 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 47

Conread position: 258-616
Cow position: chr22:46653956-46654313 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 222
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 22

Conread position: 280-613
Cow position: chr22:12476424-12476091 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 92, 83

Conread position: 312-627
Cow position: chr22:12432499-12432184 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 201
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 340-626
Cow position: chr22:12419002-12418716 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 362-613
Cow position: chr22:12419334-12419082 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 364-626
Cow position: chr22:12385704-12385441 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 29

Conread position: 370-599
Cow position: chr22:12498841-12499070 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 379-616
Cow position: chr22:11701333-11701570 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 56

Conread position: 409-607
Cow position: chr22:12419017-12418819 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.