Cow genome map
| Conread name: | rova030_m24.y1 |
| Conread position: | 135-613 |
| Cow position: | chr23:24626216-24626690 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 304 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 176-591 |
| Cow position: | chr23:24626338-24626750 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 177-576 |
| Cow position: | chr23:24560523-24560125 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 7 |
| Conread position: | 177-611 |
| Cow position: | chr23:24547216-24546782 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 275 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 203-516 |
| Cow position: | chr23:25626755-25627070 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 69 |
| Conread position: | 203-522 |
| Cow position: | chr23:24547022-24546703 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-523 |
| Cow position: | chr23:24522507-24522192 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 163, 155 |
| Conread position: | 208-576 |
| Cow position: | chr23:25626676-25627044 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 208-578 |
| Cow position: | chr23:25626007-25626377 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 208-605 |
| Cow position: | chr23:25626091-25626488 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 161, 147 |
| Conread position: | 208-607 |
| Cow position: | chr23:25660296-25660695 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 162, 147 |
| Conread position: | 208-613 |
| Cow position: | chr23:25698511-25698106 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 208-624 |
| Cow position: | chr23:24639361-24639777 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 209-490 |
| Cow position: | chr23:25660465-25660746 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 134, 160 |
| Conread position: | 209-581 |
| Cow position: | chr23:25626593-25626967 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 151 |
| Conread position: | 209-605 |
| Cow position: | chr23:25660213-25660609 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 178, 173 |
| Conread position: | 210-626 |
| Cow position: | chr23:24560575-24560159 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 161 |
| Conread position: | 210-626 |
| Cow position: | chr23:24560659-24560243 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 150 |
| Conread position: | 211-476 |
| Cow position: | chr23:25723979-25723714 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-491 |
| Cow position: | chr23:24639784-24640064 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 157, 145 |
| Conread position: | 211-575 |
| Cow position: | chr23:24639700-24640064 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 158, 149 |
| Conread position: | 211-606 |
| Cow position: | chr23:24547098-24546703 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 161, 148 |
| Conread position: | 211-606 |
| Cow position: | chr23:24547266-24546871 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 211-606 |
| Cow position: | chr23:24639532-24639927 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 211-607 |
| Cow position: | chr23:25698676-25698280 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 211-612 |
| Cow position: | chr23:24535813-24535411 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 211-615 |
| Cow position: | chr23:24522753-24522353 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 211-623 |
| Cow position: | chr23:24535897-24535485 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 211-626 |
| Cow position: | chr23:24560742-24560327 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 211-626 |
| Cow position: | chr23:24639616-24640031 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 160, 149 |
| Conread position: | 211-628 |
| Cow position: | chr23:25626262-25626676 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 157, 150 |
| Conread position: | 212-601 |
| Cow position: | chr23:24639197-24639586 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 213-624 |
| Cow position: | chr23:25625929-25626339 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 216-490 |
| Cow position: | chr23:24654102-24654376 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 155, 140 |
| Conread position: | 216-600 |
| Cow position: | chr23:24535976-24535592 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 214, 230 |
| Conread position: | 223-607 |
| Cow position: | chr23:24522576-24522192 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 148, 137 |
| Conread position: | 228-626 |
| Cow position: | chr23:24536048-24535650 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 231-605 |
| Cow position: | chr23:24639468-24639841 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 231-606 |
| Cow position: | chr23:24639300-24639675 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 231-607 |
| Cow position: | chr23:24547330-24546954 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 231-613 |
| Cow position: | chr23:25626198-25626580 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 135 |
| Conread position: | 231-626 |
| Cow position: | chr23:24560890-24560495 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 232-574 |
| Cow position: | chr23:25660404-25660746 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 137, 128 |
| Conread position: | 232-607 |
| Cow position: | chr23:24560805-24560430 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 140, 134 |
| Conread position: | 233-626 |
| Cow position: | chr23:24522647-24522257 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 235-606 |
| Cow position: | chr23:25626454-25626822 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 252-614 |
| Cow position: | chr23:25724106-25723744 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 253-623 |
| Cow position: | chr23:25660173-25660543 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 257-623 |
| Cow position: | chr23:24522791-24522428 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 112, 103 |
| Conread position: | 310-605 |
| Cow position: | chr23:24536050-24535755 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 310-605 |
| Cow position: | chr23:25660146-25660441 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 311-613 |
| Cow position: | chr23:25724131-25723829 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 314-612 |
| Cow position: | chr23:25698657-25698359 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 326-596 |
| Cow position: | chr23:24654044-24654314 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 331-626 |
| Cow position: | chr23:24547314-24547019 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 374-599 |
| Cow position: | chr23:25698681-25698456 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 394-614 |
| Cow position: | chr23:24626303-24626523 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 42 |
Show alignments to all cow chromosomes.