Cow genome map


           Conread name:
           rova030_m24.y1
        

               Conread position:
               135-613
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               304
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               176-591
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               177-576
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 7
               

               Conread position:
               177-611
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               275
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               203-516
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 69
               

               Conread position:
               203-522
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               208-523
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               163, 155
               

               Conread position:
               208-576
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               208-578
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               208-605
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               161, 147
               

               Conread position:
               208-607
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               162, 147
               

               Conread position:
               208-613
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               208-624
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               59, 70
               

               Conread position:
               209-490
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               134, 160
               

               Conread position:
               209-581
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 151
               

               Conread position:
               209-605
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               178, 173
               

               Conread position:
               210-626
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 161
               

               Conread position:
               210-626
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 150
               

               Conread position:
               211-476
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-491
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               157, 145
               

               Conread position:
               211-575
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               158, 149
               

               Conread position:
               211-606
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               161, 148
               

               Conread position:
               211-606
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               211-606
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               57, 64
               

               Conread position:
               211-607
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               211-612
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               211-615
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               211-623
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               211-626
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               211-626
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               160, 149
               

               Conread position:
               211-628
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               157, 150
               

               Conread position:
               212-601
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               213-624
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               216-490
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               155, 140
               

               Conread position:
               216-600
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               214, 230
               

               Conread position:
               223-607
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               148, 137
               

               Conread position:
               228-626
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               231-605
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               231-606
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               81, 92
               

               Conread position:
               231-607
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               231-613
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 135
               

               Conread position:
               231-626
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               232-574
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               232-607
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               140, 134
               

               Conread position:
               233-626
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               235-606
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               252-614
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               253-623
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               257-623
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               112, 103
               

               Conread position:
               310-605
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               310-605
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               311-613
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               314-612
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               326-596
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               331-626
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               374-599
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               394-614
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 42
               
Show alignments to all cow chromosomes.