Cow genome map
| Conread name: | rova030_m24.y1 |
| Conread position: | 159-623 |
| Cow position: | chr8:55580833-55581297 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-516 |
| Cow position: | chr8:45201635-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 176-623 |
| Cow position: | chr8:45201299-45201745 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 8 |
| Conread position: | 177-605 |
| Cow position: | chr8:48407264-48406837 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 89, 7 |
| Conread position: | 177-618 |
| Cow position: | chr8:46816747-46817187 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 7 |
| Conread position: | 178-618 |
| Cow position: | chr8:46816159-46816599 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 160 |
| Conread position: | 184-485 |
| Cow position: | chr8:46817089-46817390 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 193-605 |
| Cow position: | chr8:48407585-48407173 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 179, 162 |
| Conread position: | 193-618 |
| Cow position: | chr8:46816258-46816683 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 162 |
| Conread position: | 196-618 |
| Cow position: | chr8:46815837-46816263 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 199-628 |
| Cow position: | chr8:45201489-45201918 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-632 |
| Cow position: | chr8:45200906-45201334 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 152 |
| Conread position: | 208-591 |
| Cow position: | chr8:48407150-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 208-605 |
| Cow position: | chr8:48407486-48407089 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 164, 152 |
| Conread position: | 209-623 |
| Cow position: | chr8:45200995-45201409 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 156 |
| Conread position: | 209-625 |
| Cow position: | chr8:55581135-55581551 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 162, 151 |
| Conread position: | 209-626 |
| Cow position: | chr8:48406813-48406396 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 88 |
| Conread position: | 210-550 |
| Cow position: | chr8:46817031-46817371 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-605 |
| Cow position: | chr8:46816611-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 225 |
| Conread position: | 210-625 |
| Cow position: | chr8:46816107-46816522 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 234 |
| Conread position: | 211-464 |
| Cow position: | chr8:45201753-45202006 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-595 |
| Cow position: | chr8:48406643-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-600 |
| Cow position: | chr8:45201585-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-605 |
| Cow position: | chr8:46816444-46816837 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 80 |
| Conread position: | 211-607 |
| Cow position: | chr8:48407063-48406667 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 296, 319 |
| Conread position: | 211-607 |
| Cow position: | chr8:55581305-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 158, 145 |
| Conread position: | 211-614 |
| Cow position: | chr8:45201249-45201652 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 154 |
| Conread position: | 211-614 |
| Cow position: | chr8:46816948-46817351 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 211-616 |
| Cow position: | chr8:46816864-46817268 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 211-618 |
| Cow position: | chr8:46816696-46817103 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 117 |
| Conread position: | 211-624 |
| Cow position: | chr8:46816528-46816941 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 160 |
| Conread position: | 211-626 |
| Cow position: | chr8:46816360-46816776 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 211-626 |
| Cow position: | chr8:48407399-48406984 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 211-628 |
| Cow position: | chr8:45201081-45201498 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-628 |
| Cow position: | chr8:45201165-45201582 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 149 |
| Conread position: | 211-628 |
| Cow position: | chr8:45201417-45201834 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-628 |
| Cow position: | chr8:55581221-55581638 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 138 |
| Conread position: | 219-596 |
| Cow position: | chr8:55580977-55581354 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 231-626 |
| Cow position: | chr8:48407631-48407236 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 141, 132 |
| Conread position: | 232-615 |
| Cow position: | chr8:48406706-48406323 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 199, 214 |
| Conread position: | 235-626 |
| Cow position: | chr8:46815964-46816355 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-626 |
| Cow position: | chr8:46816056-46816439 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 253-438 |
| Cow position: | chr8:6958059-6957874 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 340-605 |
| Cow position: | chr8:6958056-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-605 |
| Cow position: | chr8:48407647-48407425 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 154, 145 |
| Conread position: | 421-601 |
| Cow position: | chr8:6958059-6957879 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 25 |
Show alignments to all cow chromosomes.