Cow genome map
| Conread name: | rova030_m24.y1 |
| Conread position: | 32-517 |
| Cow position: | chrX:29045954-29045458 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 169-625 |
| Cow position: | chrX:25325818-25325362 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 175-616 |
| Cow position: | chrX:25309834-25310274 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 8 |
| Conread position: | 176-607 |
| Cow position: | chrX:25309919-25310349 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 177-508 |
| Cow position: | chrX:29044978-29044648 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 177-605 |
| Cow position: | chrX:25309752-25310179 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 7 |
| Conread position: | 177-626 |
| Cow position: | chrX:29045231-29044782 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 178 |
| Conread position: | 178-581 |
| Cow position: | chrX:25324633-25324230 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 193, 187 |
| Conread position: | 178-632 |
| Cow position: | chrX:25325138-25324683 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 182-614 |
| Cow position: | chrX:25325637-25325205 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 178 |
| Conread position: | 183-607 |
| Cow position: | chrX:25324712-25324288 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 176 |
| Conread position: | 183-625 |
| Cow position: | chrX:25325216-25324774 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-625 |
| Cow position: | chrX:13826827-13826387 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 184-632 |
| Cow position: | chrX:25324963-25324515 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 181 |
| Conread position: | 205-577 |
| Cow position: | chrX:25310199-25310571 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 159 |
| Conread position: | 208-614 |
| Cow position: | chrX:25325695-25325290 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 401, 0 |
| Conread position: | 210-625 |
| Cow position: | chrX:25325273-25324858 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 160 |
| Conread position: | 211-476 |
| Cow position: | chrX:29045680-29045415 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-503 |
| Cow position: | chrX:25310289-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 146, 158 |
| Conread position: | 211-578 |
| Cow position: | chrX:29045029-29044662 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-614 |
| Cow position: | chrX:25324768-25324365 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 225 |
| Conread position: | 211-614 |
| Cow position: | chrX:25325524-25325121 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 228 |
| Conread position: | 211-618 |
| Cow position: | chrX:25325020-25324613 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 155 |
| Conread position: | 211-623 |
| Cow position: | chrX:25310121-25310533 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 211-624 |
| Cow position: | chrX:25324852-25324439 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 155 |
| Conread position: | 211-625 |
| Cow position: | chrX:25325440-25325026 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 211-626 |
| Cow position: | chrX:25310037-25310452 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 211-626 |
| Cow position: | chrX:25325356-25324941 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 211-626 |
| Cow position: | chrX:29045113-29044698 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-626 |
| Cow position: | chrX:29045281-29044866 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 160 |
| Conread position: | 212-618 |
| Cow position: | chrX:29045361-29044958 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 215-600 |
| Cow position: | chrX:25309707-25310090 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 27 |
| Conread position: | 247-607 |
| Cow position: | chrX:13826849-13826489 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 254-626 |
| Cow position: | chrX:25309660-25310032 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 256-615 |
| Cow position: | chrX:13826924-13826566 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 106, 94 |
| Conread position: | 277-626 |
| Cow position: | chrX:29045377-29045034 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 304-601 |
| Cow position: | chrX:29045755-29045458 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 306-618 |
| Cow position: | chrX:29045837-29045525 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-626 |
| Cow position: | chrX:25325847-25325529 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 374-632 |
| Cow position: | chrX:29045853-29045595 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 70 |
Show alignments to all cow chromosomes.