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Cow genome map

           
Conread name:
           
rova038_i13.y1
        

               
Conread position:
               
2-480
               

               
Cow position:
               
chr15:5536178-5535696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 7
               

               
Conread position:
               
4-445
               

               
Cow position:
               
chr15:6530410-6530872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr15:40999624-41000098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 239
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr15:6970405-6969935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr15:18284669-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr15:20117534-20117253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr15:1128409-1128136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
179, 41
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr15:15707692-15708037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr15:23567699-23568125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
5-441
               

               
Cow position:
               
chr15:47842839-47843271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr15:608583-608123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr15:6226770-6227206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr15:16112829-16112376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr15:23798095-23798554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr15:10336178-10335732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 110
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr15:17233611-17233168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
5-448
               

               
Cow position:
               
chr15:20352266-20351807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 231
               

               
Conread position:
               
5-448
               

               
Cow position:
               
chr15:30047109-30047574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 228
               

               
Conread position:
               
5-449
               

               
Cow position:
               
chr15:15041008-15041449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr15:22168490-22168041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 293
               

               
Conread position:
               
5-453
               

               
Cow position:
               
chr15:44641324-44640864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 153
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr15:26911654-26912108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
5-458
               

               
Cow position:
               
chr15:1082960-1083409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
179, 41
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr15:4138557-4138095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr15:19119190-19119630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr15:25208340-25208797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr15:43827349-43827810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr15:3699857-3700331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr15:26078943-26079395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
109, 161
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr15:37382049-37381580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr15:20534023-20534498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
5-470
               

               
Cow position:
               
chr15:4918633-4919115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
5-471
               

               
Cow position:
               
chr15:1329679-1330154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr15:13554766-13554293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
5-488
               

               
Cow position:
               
chr15:30982341-30981871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr15:9062150-9062454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 242
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr15:33376382-33376673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr15:37822884-37823184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
128, 240
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr15:5498603-5498969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr15:22751874-22751514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 58
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr15:9870989-9871361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr15:42415692-42415310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
6-430
               

               
Cow position:
               
chr15:20390864-20391284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
185, 97
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr15:15881347-15880910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr15:14871167-14870724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr15:17196571-17196125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 299
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr15:34206773-34207211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr15:28924343-28924788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 118
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr15:16616619-16616152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr15:19403401-19402964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr15:36392089-36391633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 87
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr15:794592-795067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr15:5234579-5235042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr15:45245125-45245591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
274, 7
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr15:20458874-20459361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 199
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr15:21832001-21832286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
9-406
               

               
Cow position:
               
chr15:4676583-4676983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 148
               

               
Conread position:
               
9-435
               

               
Cow position:
               
chr15:43030599-43031037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 132
               

               
Conread position:
               
9-446
               

               
Cow position:
               
chr15:24616986-24616546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr15:20422341-20422820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 106
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr15:43626881-43626431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr15:49738625-49739029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 203
               

               
Conread position:
               
10-453
               

               
Cow position:
               
chr15:7430404-7429937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr15:52380710-52380344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 101
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr15:9267644-9267911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
13-445
               

               
Cow position:
               
chr15:33976274-33976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 169
               

               
Conread position:
               
13-448
               

               
Cow position:
               
chr15:21388752-21389192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr15:16604238-16603779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chr15:22532657-22532200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
14-457
               

               
Cow position:
               
chr15:26752598-26753017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
14-460
               

               
Cow position:
               
chr15:4485562-4485116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 301
               

               
Conread position:
               
14-460
               

               
Cow position:
               
chr15:24797383-24797845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
15-397
               

               
Cow position:
               
chr15:27281279-27280895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
17-487
               

               
Cow position:
               
chr15:29272610-29272131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 227
               

               
Conread position:
               
20-437
               

               
Cow position:
               
chr15:52482417-52482843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
20-437
               

               
Cow position:
               
chr15:53164431-53164006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 93
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr15:13515780-13515373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 103
               

               
Conread position:
               
24-353
               

               
Cow position:
               
chr15:53680363-53680684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
24-446
               

               
Cow position:
               
chr15:27247916-27247482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
24-473
               

               
Cow position:
               
chr15:20486805-20487255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 162
               

               
Conread position:
               
25-456
               

               
Cow position:
               
chr15:17084616-17084174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
26-373
               

               
Cow position:
               
chr15:30820417-30820781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 311
               

               
Conread position:
               
26-445
               

               
Cow position:
               
chr15:41418405-41418853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
27-290
               

               
Cow position:
               
chr15:48403742-48404004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
27-459
               

               
Cow position:
               
chr15:19186213-19186651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
27-470
               

               
Cow position:
               
chr15:22938931-22939374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
32-290
               

               
Cow position:
               
chr15:5571236-5571497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
32-368
               

               
Cow position:
               
chr15:52739725-52740065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
194, 5
               

               
Conread position:
               
32-390
               

               
Cow position:
               
chr15:8962397-8962041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
37-407
               

               
Cow position:
               
chr15:25584694-25585076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 201
               

               
Conread position:
               
39-460
               

               
Cow position:
               
chr15:42788770-42789189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
171, 75
               

               
Conread position:
               
46-477
               

               
Cow position:
               
chr15:286866-286422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr15:24129031-24128717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
50-427
               

               
Cow position:
               
chr15:18018294-18017923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr15:33625332-33624932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
51-449
               

               
Cow position:
               
chr15:26404650-26404257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
54-452
               

               
Cow position:
               
chr15:16307794-16307390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 185
               

               
Conread position:
               
63-336
               

               
Cow position:
               
chr15:11362809-11363083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr15:20725248-20725543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
66-465
               

               
Cow position:
               
chr15:36259225-36259647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
69-460
               

               
Cow position:
               
chr15:43913721-43914136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
77-345
               

               
Cow position:
               
chr15:33679049-33678783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
77-429
               

               
Cow position:
               
chr15:4535262-4534903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
77-444
               

               
Cow position:
               
chr15:24994173-24994536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
77-452
               

               
Cow position:
               
chr15:14020826-14020453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
77-456
               

               
Cow position:
               
chr15:16823291-16822904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
77-456
               

               
Cow position:
               
chr15:17100361-17100747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
77-456
               

               
Cow position:
               
chr15:39599795-39599411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
77-459
               

               
Cow position:
               
chr15:38883512-38883111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
78-279
               

               
Cow position:
               
chr15:241202-240994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
78-343
               

               
Cow position:
               
chr15:40343604-40343330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
78-368
               

               
Cow position:
               
chr15:18206157-18206451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 286
               

               
Conread position:
               
78-373
               

               
Cow position:
               
chr15:36781982-36782269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
78-403
               

               
Cow position:
               
chr15:41619832-41620172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr15:45217176-45216823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
78-445
               

               
Cow position:
               
chr15:12785790-12785406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
50, 240
               

               
Conread position:
               
78-456
               

               
Cow position:
               
chr15:16927730-16928131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
78-466
               

               
Cow position:
               
chr15:1298090-1297694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
79-459
               

               
Cow position:
               
chr15:21941496-21941881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
80-460
               

               
Cow position:
               
chr15:50302538-50302145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
80-466
               

               
Cow position:
               
chr15:21894134-21893730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 155
               

               
Conread position:
               
81-460
               

               
Cow position:
               
chr15:50341459-50341082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
208, 33
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr15:34140331-34139936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
82-359
               

               
Cow position:
               
chr15:40009300-40009584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
82-456
               

               
Cow position:
               
chr15:11011259-11011640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
82-457
               

               
Cow position:
               
chr15:19771477-19771098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
83-289
               

               
Cow position:
               
chr15:11658216-11658426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
83-398
               

               
Cow position:
               
chr15:11692687-11693015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 315
               

               
Conread position:
               
83-457
               

               
Cow position:
               
chr15:35642369-35641979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 238
               

               
Conread position:
               
83-460
               

               
Cow position:
               
chr15:29604366-29604739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
84-460
               

               
Cow position:
               
chr15:5683482-5683111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
85-444
               

               
Cow position:
               
chr15:22137030-22136667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 191
               

               
Conread position:
               
85-452
               

               
Cow position:
               
chr15:27972868-27973250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 241
               

               
Conread position:
               
85-463
               

               
Cow position:
               
chr15:12723425-12723045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
86-459
               

               
Cow position:
               
chr15:21803311-21803695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr15:6586369-6586574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
88-476
               

               
Cow position:
               
chr15:2144788-2145196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
89-427
               

               
Cow position:
               
chr15:35417279-35417631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
89-466
               

               
Cow position:
               
chr15:22532004-22531623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 150
               

               
Conread position:
               
92-437
               

               
Cow position:
               
chr15:29810449-29810108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
93-446
               

               
Cow position:
               
chr15:10245670-10246019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
94-460
               

               
Cow position:
               
chr15:22938439-22938801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
96-339
               

               
Cow position:
               
chr15:21523126-21522876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
96-439
               

               
Cow position:
               
chr15:47822135-47821798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
196, 19
               

               
Conread position:
               
97-445
               

               
Cow position:
               
chr15:31857927-31857567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
98-459
               

               
Cow position:
               
chr15:26158284-26158634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
99-416
               

               
Cow position:
               
chr15:21421274-21420943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
100-368
               

               
Cow position:
               
chr15:5633004-5632747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
105-285
               

               
Cow position:
               
chr15:12304968-12304788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
105-434
               

               
Cow position:
               
chr15:38394747-38394416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 220
               

               
Conread position:
               
105-466
               

               
Cow position:
               
chr15:49922466-49922090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
107-453
               

               
Cow position:
               
chr15:50322920-50322563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
108-459
               

               
Cow position:
               
chr15:17763224-17762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
110-465
               

               
Cow position:
               
chr15:39598560-39598196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
112-361
               

               
Cow position:
               
chr15:10846042-10845787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
118-458
               

               
Cow position:
               
chr15:10088628-10088282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
118-459
               

               
Cow position:
               
chr15:11995711-11996063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 324
               

               
Conread position:
               
126-466
               

               
Cow position:
               
chr15:47843802-47844140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
128-468
               

               
Cow position:
               
chr15:26918970-26919320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
129-457
               

               
Cow position:
               
chr15:50351119-50350812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
130-445
               

               
Cow position:
               
chr15:44658661-44658339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr15:1722550-1722885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
130-460
               

               
Cow position:
               
chr15:17353349-17353686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
130-460
               

               
Cow position:
               
chr15:26573688-26573339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
74, 314
               

               
Conread position:
               
130-466
               

               
Cow position:
               
chr15:225502-225853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
132-460
               

               
Cow position:
               
chr15:5071801-5072123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
237, 121
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr15:8007280-8007036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
134-445
               

               
Cow position:
               
chr15:1804031-1804362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 208
               

               
Conread position:
               
141-445
               

               
Cow position:
               
chr15:21821630-21821948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
142-358
               

               
Cow position:
               
chr15:34144866-34145083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
143-460
               

               
Cow position:
               
chr15:16667211-16667536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
143-466
               

               
Cow position:
               
chr15:36773406-36773738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
48, 178
               

               
Conread position:
               
146-445
               

               
Cow position:
               
chr15:45585010-45584709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
153-445
               

               
Cow position:
               
chr15:32323927-32324229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
155-460
               

               
Cow position:
               
chr15:2141025-2141342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr15:12441553-12441763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
133, 105
               

               
Conread position:
               
164-370
               

               
Cow position:
               
chr15:16657759-16657549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
164-402
               

               
Cow position:
               
chr15:17858971-17859207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
165-460
               

               
Cow position:
               
chr15:22871876-22871575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 152
               

               
Conread position:
               
166-460
               

               
Cow position:
               
chr15:23275799-23275503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
169-469
               

               
Cow position:
               
chr15:23572417-23572734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
170-446
               

               
Cow position:
               
chr15:38838011-38837724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
177-458
               

               
Cow position:
               
chr15:12655658-12655954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
181-460
               

               
Cow position:
               
chr15:18671204-18671493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
181-460
               

               
Cow position:
               
chr15:39316585-39316881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
183-460
               

               
Cow position:
               
chr15:10737497-10737781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
184-460
               

               
Cow position:
               
chr15:10608057-10608344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
186-459
               

               
Cow position:
               
chr15:8354288-8354002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
186-460
               

               
Cow position:
               
chr15:5726569-5726286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
107, 126
               

               
Conread position:
               
186-465
               

               
Cow position:
               
chr15:43788488-43788216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
187-459
               

               
Cow position:
               
chr15:4296008-4295726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
188-444
               

               
Cow position:
               
chr15:37205287-37205025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
188-459
               

               
Cow position:
               
chr15:25386685-25386401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
191-466
               

               
Cow position:
               
chr15:4178697-4178989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
194-453
               

               
Cow position:
               
chr15:12870627-12870896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 114
               

               
Conread position:
               
197-442
               

               
Cow position:
               
chr15:43599418-43599168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr15:915612-915882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
202-466
               

               
Cow position:
               
chr15:10231513-10231793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 254
               

               
Conread position:
               
208-460
               

               
Cow position:
               
chr15:662246-662505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
212-460
               

               
Cow position:
               
chr15:4418182-4418440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
212-461
               

               
Cow position:
               
chr15:30470751-30471012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
212-466
               

               
Cow position:
               
chr15:9107255-9106991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 216
               

               
Conread position:
               
213-467
               

               
Cow position:
               
chr15:9781684-9781422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
216-466
               

               
Cow position:
               
chr15:49274166-49273912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
216-470
               

               
Cow position:
               
chr15:29331218-29330957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
218-443
               

               
Cow position:
               
chr15:39326299-39326539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
219-440
               

               
Cow position:
               
chr15:35425600-35425828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
220-466
               

               
Cow position:
               
chr15:5717921-5717669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
225-453
               

               
Cow position:
               
chr15:5158581-5158342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
225-460
               

               
Cow position:
               
chr15:31560196-31560428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
229-460
               

               
Cow position:
               
chr15:23779869-23780106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chr15:34284218-34284449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
241-457
               

               
Cow position:
               
chr15:35440885-35441114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
241-460
               

               
Cow position:
               
chr15:31928708-31928935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
244-442
               

               
Cow position:
               
chr15:10660364-10660576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
251-453
               

               
Cow position:
               
chr15:39286232-39286440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
251-460
               

               
Cow position:
               
chr15:44280278-44280061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
258-460
               

               
Cow position:
               
chr15:5044309-5044516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
261-466
               

               
Cow position:
               
chr15:41527806-41528021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
266-459
               

               
Cow position:
               
chr15:14176334-14176537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
269-453
               

               
Cow position:
               
chr15:9497337-9497534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
272-460
               

               
Cow position:
               
chr15:32977685-32977886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
296-470
               

               
Cow position:
               
chr15:41583013-41582835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 145
               

               
Conread position:
               
314-457
               

               
Cow position:
               
chr15:14261144-14261293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
320-458
               

               
Cow position:
               
chr15:48590136-48590279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               
Show alignments to all cow chromosomes.