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Cow genome map

           
Conread name:
           
rova038_i13.y1
        

               
Conread position:
               
2-416
               

               
Cow position:
               
chr20:34001689-34001263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr20:6240826-6240351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr20:13790014-13790240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
186, 116
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr20:9411290-9411567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr20:41119628-41119897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr20:13493442-13493722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr20:23679442-23679157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 197
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr20:12334088-12334385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr20:18399466-18399772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr20:24391705-24392021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
186, 52
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr20:27339768-27340109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr20:15068853-15069194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr20:3034802-3035162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr20:5104729-5104392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr20:17734064-17733720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr20:24002034-24002377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr20:17903864-17904229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr20:19313360-19312988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 83
               

               
Conread position:
               
5-408
               

               
Cow position:
               
chr20:8429453-8429866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr20:35797312-35797743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
5-440
               

               
Cow position:
               
chr20:10235557-10235982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 225
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr20:33363221-33363672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 178
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr20:9412201-9412644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 110
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr20:9473908-9473475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr20:9536842-9537288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr20:12996304-12995850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 201
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr20:22959638-22959192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr20:18321089-18320637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr20:40423385-40422946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 276
               

               
Conread position:
               
5-449
               

               
Cow position:
               
chr20:19459937-19459505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr20:33144848-33144392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr20:6096780-6096332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 141
               

               
Conread position:
               
5-453
               

               
Cow position:
               
chr20:33532015-33532467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 158
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr20:7549963-7550394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 62
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr20:3599687-3599228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 222
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr20:17251416-17251890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 119
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr20:4621635-4621182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr20:13269334-13269786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr20:17845659-17846131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr20:21345107-21345604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr20:23065132-23064662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 241
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr20:36780025-36779559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr20:6054800-6054333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr20:19236796-19237252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 41
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr20:28604919-28605387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
122, 75
               

               
Conread position:
               
5-466
               

               
Cow position:
               
chr20:14806590-14807065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
5-467
               

               
Cow position:
               
chr20:11550071-11550549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 188
               

               
Conread position:
               
5-467
               

               
Cow position:
               
chr20:19751017-19751487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr20:13877004-13876531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 210
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr20:19410659-19410374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr20:33170165-33169882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr20:3781725-3781381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 225
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr20:19146576-19146947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr20:23792310-23792752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr20:39398186-39398637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr20:40176959-40177401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
6-453
               

               
Cow position:
               
chr20:23871109-23870655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr20:18392533-18392103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr20:40781683-40782130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr20:581222-580749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr20:39415461-39415921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
188, 32
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr20:28982408-28982879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr20:35145713-35146195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 460
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr20:20967063-20967500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr20:19328108-19328575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr20:15761240-15760889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
7-452
               

               
Cow position:
               
chr20:38817723-38818161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr20:26469369-26469024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
9-450
               

               
Cow position:
               
chr20:6423674-6424128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
9-466
               

               
Cow position:
               
chr20:9433311-9433764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 106
               

               
Conread position:
               
10-453
               

               
Cow position:
               
chr20:42469478-42469923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 8
               

               
Conread position:
               
10-460
               

               
Cow position:
               
chr20:39728161-39728624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr20:10468787-10469056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
13-453
               

               
Cow position:
               
chr20:13751959-13752390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
13-460
               

               
Cow position:
               
chr20:10818515-10818070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
14-456
               

               
Cow position:
               
chr20:33435448-33434993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
14-458
               

               
Cow position:
               
chr20:26076802-26077252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
268, 54
               

               
Conread position:
               
14-466
               

               
Cow position:
               
chr20:7426475-7426016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr20:35999405-35999680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
17-443
               

               
Cow position:
               
chr20:746677-747096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
17-470
               

               
Cow position:
               
chr20:34202364-34202818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 298
               

               
Conread position:
               
21-466
               

               
Cow position:
               
chr20:12582227-12581774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 152
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr20:13652640-13652196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
25-305
               

               
Cow position:
               
chr20:32636839-32636561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr20:21714477-21714939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
26-460
               

               
Cow position:
               
chr20:21019291-21019733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 144
               

               
Conread position:
               
30-373
               

               
Cow position:
               
chr20:35958379-35958724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 75
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr20:31464647-31464318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr20:13967526-13967180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
34-461
               

               
Cow position:
               
chr20:7659475-7659057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
38-356
               

               
Cow position:
               
chr20:24521489-24521808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 236
               

               
Conread position:
               
39-465
               

               
Cow position:
               
chr20:22064812-22065242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
40-457
               

               
Cow position:
               
chr20:5950889-5950475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
59-445
               

               
Cow position:
               
chr20:40127577-40127187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
62-448
               

               
Cow position:
               
chr20:6903091-6903473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
230, 64
               

               
Conread position:
               
64-354
               

               
Cow position:
               
chr20:20312973-20312690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
67-343
               

               
Cow position:
               
chr20:3331527-3331239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
68-446
               

               
Cow position:
               
chr20:41703922-41704312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 268
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr20:26679900-26680176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
76-366
               

               
Cow position:
               
chr20:11923465-11923177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
77-305
               

               
Cow position:
               
chr20:37200137-37200367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
77-368
               

               
Cow position:
               
chr20:14735454-14735740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
77-409
               

               
Cow position:
               
chr20:4205740-4206092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
77-437
               

               
Cow position:
               
chr20:14759887-14759517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 135
               

               
Conread position:
               
77-452
               

               
Cow position:
               
chr20:14572581-14572201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
77-466
               

               
Cow position:
               
chr20:7442347-7441957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
77-467
               

               
Cow position:
               
chr20:12420844-12420442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 152
               

               
Conread position:
               
77-469
               

               
Cow position:
               
chr20:13829044-13829440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
78-368
               

               
Cow position:
               
chr20:22704066-22704366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
78-373
               

               
Cow position:
               
chr20:35009962-35009661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
78-469
               

               
Cow position:
               
chr20:34597330-34596919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
78-485
               

               
Cow position:
               
chr20:29805879-29805464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr20:11741524-11741156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
79-448
               

               
Cow position:
               
chr20:25686572-25686189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
110, 150
               

               
Conread position:
               
79-450
               

               
Cow position:
               
chr20:11482360-11481974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 353
               

               
Conread position:
               
80-445
               

               
Cow position:
               
chr20:40511977-40511600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
80-460
               

               
Cow position:
               
chr20:38578976-38578593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
82-373
               

               
Cow position:
               
chr20:40256752-40257046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
82-453
               

               
Cow position:
               
chr20:38768671-38768299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
82-459
               

               
Cow position:
               
chr20:34776968-34777350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
84-437
               

               
Cow position:
               
chr20:15235548-15235900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
86-358
               

               
Cow position:
               
chr20:9379195-9379467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 235
               

               
Conread position:
               
86-454
               

               
Cow position:
               
chr20:28296076-28296460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 244
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr20:14879572-14879968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
88-318
               

               
Cow position:
               
chr20:6848410-6848647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
129, 171
               

               
Conread position:
               
89-358
               

               
Cow position:
               
chr20:32069069-32068790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 237
               

               
Conread position:
               
89-452
               

               
Cow position:
               
chr20:35907257-35906887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
90-443
               

               
Cow position:
               
chr20:20983797-20984146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
90-445
               

               
Cow position:
               
chr20:34251888-34251516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
90-460
               

               
Cow position:
               
chr20:9923387-9923738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
91-303
               

               
Cow position:
               
chr20:33176973-33177196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
91-370
               

               
Cow position:
               
chr20:34918070-34918344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
91-447
               

               
Cow position:
               
chr20:15593087-15593444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
93-469
               

               
Cow position:
               
chr20:38551167-38551546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
97-460
               

               
Cow position:
               
chr20:15566034-15565656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
36, 222
               

               
Conread position:
               
102-297
               

               
Cow position:
               
chr20:11043695-11043505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
104-469
               

               
Cow position:
               
chr20:34098154-34097771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
105-453
               

               
Cow position:
               
chr20:21928710-21929069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
105-459
               

               
Cow position:
               
chr20:23846867-23846494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
107-440
               

               
Cow position:
               
chr20:11542476-11542136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
107-466
               

               
Cow position:
               
chr20:6602848-6603215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
108-465
               

               
Cow position:
               
chr20:12239872-12239505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
109-460
               

               
Cow position:
               
chr20:13994618-13994987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 270
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr20:28831780-28832045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
118-367
               

               
Cow position:
               
chr20:11864318-11864063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 205
               

               
Conread position:
               
127-457
               

               
Cow position:
               
chr20:3321310-3320976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
130-447
               

               
Cow position:
               
chr20:31080875-31081196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
130-448
               

               
Cow position:
               
chr20:34107947-34108265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
130-466
               

               
Cow position:
               
chr20:14980684-14980325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
132-453
               

               
Cow position:
               
chr20:5814401-5814730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
132-459
               

               
Cow position:
               
chr20:14100605-14100263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr20:37272549-37272776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
135-445
               

               
Cow position:
               
chr20:31323634-31323943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
142-460
               

               
Cow position:
               
chr20:40446178-40446501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
143-460
               

               
Cow position:
               
chr20:15569106-15568778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 168
               

               
Conread position:
               
144-455
               

               
Cow position:
               
chr20:5636325-5636649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
145-460
               

               
Cow position:
               
chr20:21761622-21761944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 111
               

               
Conread position:
               
146-452
               

               
Cow position:
               
chr20:13025761-13025443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
151-393
               

               
Cow position:
               
chr20:18500071-18500307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr20:4334667-4334362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
155-458
               

               
Cow position:
               
chr20:34221336-34221646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
159-467
               

               
Cow position:
               
chr20:14433568-14433243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 283
               

               
Conread position:
               
164-460
               

               
Cow position:
               
chr20:9267236-9266936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
164-460
               

               
Cow position:
               
chr20:22484725-22485030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
171-460
               

               
Cow position:
               
chr20:41089918-41089624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr20:36633692-36633983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
67, 149
               

               
Conread position:
               
186-458
               

               
Cow position:
               
chr20:11188918-11188638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
190-419
               

               
Cow position:
               
chr20:24000908-24000666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
191-437
               

               
Cow position:
               
chr20:36040363-36040623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
197-459
               

               
Cow position:
               
chr20:24833992-24834260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr20:20099700-20099428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
199-446
               

               
Cow position:
               
chr20:28594183-28594444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
212-469
               

               
Cow position:
               
chr20:24711748-24712021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
213-460
               

               
Cow position:
               
chr20:13983277-13983528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
213-460
               

               
Cow position:
               
chr20:41883650-41883901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr20:36741393-36741634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chr20:5576135-5576376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
220-490
               

               
Cow position:
               
chr20:33439058-33438779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
224-456
               

               
Cow position:
               
chr20:5078548-5078794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
225-444
               

               
Cow position:
               
chr20:16491997-16492228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
227-460
               

               
Cow position:
               
chr20:16548350-16548106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
238-457
               

               
Cow position:
               
chr20:11008109-11008338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chr20:354958-354727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
238-460
               

               
Cow position:
               
chr20:12085486-12085266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr20:23506525-23506327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
244-452
               

               
Cow position:
               
chr20:30119629-30119414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 177
               

               
Conread position:
               
246-445
               

               
Cow position:
               
chr20:10772150-10772363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
246-460
               

               
Cow position:
               
chr20:20056538-20056315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
246-466
               

               
Cow position:
               
chr20:9376415-9376645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 206
               

               
Conread position:
               
260-460
               

               
Cow position:
               
chr20:21428120-21428330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 170
               

               
Conread position:
               
260-466
               

               
Cow position:
               
chr20:11359669-11359452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
261-460
               

               
Cow position:
               
chr20:40157862-40158071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
280-467
               

               
Cow position:
               
chr20:5364911-5365106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
317-460
               

               
Cow position:
               
chr20:13943785-13943931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.