Cow genome map
| Conread name: | rova038_i13.y1 |
| Conread position: | 1-288 |
| Cow position: | chr25:40657955-40658245 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 2-343 |
| Cow position: | chr25:31733074-31732733 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 7 |
| Conread position: | 5-283 |
| Cow position: | chr25:18885820-18885544 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 137, 187 |
| Conread position: | 5-288 |
| Cow position: | chr25:26757091-26757380 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 168 |
| Conread position: | 5-356 |
| Cow position: | chr25:1735650-1735306 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 73 |
| Conread position: | 5-356 |
| Cow position: | chr25:5792142-5791786 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 5-356 |
| Cow position: | chr25:17354039-17354381 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 185 |
| Conread position: | 5-370 |
| Cow position: | chr25:9396115-9396474 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 221, 102 |
| Conread position: | 5-373 |
| Cow position: | chr25:25754335-25753965 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 77 |
| Conread position: | 5-373 |
| Cow position: | chr25:36779156-36779532 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 122, 110 |
| Conread position: | 5-374 |
| Cow position: | chr25:25827121-25827503 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 5-387 |
| Cow position: | chr25:6891867-6891489 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 180 |
| Conread position: | 5-430 |
| Cow position: | chr25:5756351-5756780 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 80, 262 |
| Conread position: | 5-436 |
| Cow position: | chr25:9349597-9349181 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 163 |
| Conread position: | 5-440 |
| Cow position: | chr25:11437142-11436701 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 198 |
| Conread position: | 5-445 |
| Cow position: | chr25:41363479-41363041 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 163, 41 |
| Conread position: | 5-453 |
| Cow position: | chr25:10643648-10643190 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 5-457 |
| Cow position: | chr25:21193283-21192817 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 108 |
| Conread position: | 5-457 |
| Cow position: | chr25:26654568-26655030 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 5-459 |
| Cow position: | chr25:2414497-2414923 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 291, 63 |
| Conread position: | 5-460 |
| Cow position: | chr25:7216482-7216950 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 230 |
| Conread position: | 5-460 |
| Cow position: | chr25:11585173-11585646 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 5-460 |
| Cow position: | chr25:20007781-20008259 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 340 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 59, 193 |
| Conread position: | 5-460 |
| Cow position: | chr25:22530947-22531407 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 165 |
| Conread position: | 5-461 |
| Cow position: | chr25:8120437-8120909 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 108 |
| Conread position: | 5-466 |
| Cow position: | chr25:24572732-24573199 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 178 |
| Conread position: | 5-466 |
| Cow position: | chr25:26087176-26087655 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 5-472 |
| Cow position: | chr25:17658275-17658749 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 108 |
| Conread position: | 5-479 |
| Cow position: | chr25:13569507-13569032 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 190 |
| Conread position: | 6-290 |
| Cow position: | chr25:27621743-27622034 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 111 |
| Conread position: | 6-292 |
| Cow position: | chr25:26618114-26618405 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 6-311 |
| Cow position: | chr25:26111943-26112237 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 6-358 |
| Cow position: | chr25:5514670-5515030 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 6-385 |
| Cow position: | chr25:20394868-20395235 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 283, 93 |
| Conread position: | 6-435 |
| Cow position: | chr25:6464367-6463930 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 43 |
| Conread position: | 6-440 |
| Cow position: | chr25:4680901-4681332 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 185, 31 |
| Conread position: | 6-446 |
| Cow position: | chr25:11662154-11661705 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 67 |
| Conread position: | 6-446 |
| Cow position: | chr25:30319788-30319341 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 332 |
| Conread position: | 6-452 |
| Cow position: | chr25:1837904-1838360 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 61 |
| Conread position: | 6-460 |
| Cow position: | chr25:21245945-21245478 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 107 |
| Conread position: | 7-445 |
| Cow position: | chr25:38981769-38982204 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 116 |
| Conread position: | 7-466 |
| Cow position: | chr25:14834006-14833531 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 8-434 |
| Cow position: | chr25:41351539-41351119 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 9-443 |
| Cow position: | chr25:21191154-21191598 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 59 |
| Conread position: | 9-460 |
| Cow position: | chr25:14791420-14791881 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 59 |
| Conread position: | 10-436 |
| Cow position: | chr25:36037125-36036677 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 226 |
| Conread position: | 13-370 |
| Cow position: | chr25:2046883-2046530 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 14-373 |
| Cow position: | chr25:9957365-9957007 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 169 |
| Conread position: | 14-465 |
| Cow position: | chr25:35347572-35348042 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 16-445 |
| Cow position: | chr25:18564166-18564597 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 164 |
| Conread position: | 17-458 |
| Cow position: | chr25:2498935-2499394 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 19-453 |
| Cow position: | chr25:12097515-12097953 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 20-373 |
| Cow position: | chr25:6886293-6885940 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 108, 52 |
| Conread position: | 24-374 |
| Cow position: | chr25:12239458-12239115 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 235, 62 |
| Conread position: | 27-289 |
| Cow position: | chr25:41364297-41364041 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 101, 158 |
| Conread position: | 32-451 |
| Cow position: | chr25:22241693-22242080 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 201, 12 |
| Conread position: | 33-449 |
| Cow position: | chr25:24136748-24136326 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 37-285 |
| Cow position: | chr25:8347201-8347449 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 91, 154 |
| Conread position: | 45-474 |
| Cow position: | chr25:36761805-36762244 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 234 |
| Conread position: | 46-367 |
| Cow position: | chr25:15319620-15319945 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 46-465 |
| Cow position: | chr25:6474399-6473954 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 48-465 |
| Cow position: | chr25:16319423-16319009 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 58-460 |
| Cow position: | chr25:21895174-21894758 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 62-407 |
| Cow position: | chr25:20348575-20348942 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 62-458 |
| Cow position: | chr25:20023682-20023262 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 172 |
| Conread position: | 67-306 |
| Cow position: | chr25:10366030-10365788 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 70-454 |
| Cow position: | chr25:36081600-36081995 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 72-373 |
| Cow position: | chr25:36535705-36535402 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 72-456 |
| Cow position: | chr25:14512843-14513237 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 76-460 |
| Cow position: | chr25:24452437-24452029 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 77-358 |
| Cow position: | chr25:12824283-12824001 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 77-458 |
| Cow position: | chr25:22203958-22203574 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 218 |
| Conread position: | 78-353 |
| Cow position: | chr25:13642583-13642301 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 241 |
| Conread position: | 78-355 |
| Cow position: | chr25:35332906-35333172 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 78-445 |
| Cow position: | chr25:21266739-21267098 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 78-460 |
| Cow position: | chr25:22297284-22296908 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 78-460 |
| Cow position: | chr25:23917575-23917968 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 78-460 |
| Cow position: | chr25:28188215-28187819 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 79-475 |
| Cow position: | chr25:9990355-9989970 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 80-457 |
| Cow position: | chr25:18988112-18988506 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 82-459 |
| Cow position: | chr25:20785844-20785460 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 212, 42 |
| Conread position: | 82-466 |
| Cow position: | chr25:7306035-7306427 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 51, 156 |
| Conread position: | 84-227 |
| Cow position: | chr25:13566584-13566730 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 84-358 |
| Cow position: | chr25:9961439-9961157 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 84-434 |
| Cow position: | chr25:17566326-17566688 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 107 |
| Conread position: | 84-466 |
| Cow position: | chr25:26700779-26701157 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 84-466 |
| Cow position: | chr25:38957717-38958089 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 107, 30 |
| Conread position: | 85-459 |
| Cow position: | chr25:31230483-31230119 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 284, 43 |
| Conread position: | 86-285 |
| Cow position: | chr25:17712275-17712477 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 106 |
| Conread position: | 87-353 |
| Cow position: | chr25:16001779-16001514 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 87-460 |
| Cow position: | chr25:7581685-7581300 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 87-466 |
| Cow position: | chr25:9269115-9269477 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 88-460 |
| Cow position: | chr25:15254588-15254222 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 40, 138 |
| Conread position: | 91-306 |
| Cow position: | chr25:36026753-36026973 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 92-358 |
| Cow position: | chr25:4002543-4002818 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 221 |
| Conread position: | 93-466 |
| Cow position: | chr25:24669682-24669315 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 98-448 |
| Cow position: | chr25:18265917-18266278 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 103-303 |
| Cow position: | chr25:12899508-12899717 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 107-457 |
| Cow position: | chr25:61422-61773 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 109-445 |
| Cow position: | chr25:12840954-12840607 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 117-460 |
| Cow position: | chr25:10218279-10217923 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 176 |
| Conread position: | 118-460 |
| Cow position: | chr25:34169727-34170072 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 129-445 |
| Cow position: | chr25:34768935-34768623 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 179, 75 |
| Conread position: | 130-401 |
| Cow position: | chr25:38425151-38425428 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 162, 112 |
| Conread position: | 130-452 |
| Cow position: | chr25:26090026-26089695 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 162, 9 |
| Conread position: | 131-450 |
| Cow position: | chr25:20133530-20133199 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 131-465 |
| Cow position: | chr25:2624591-2624930 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 132-457 |
| Cow position: | chr25:12319550-12319230 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 164, 47 |
| Conread position: | 138-431 |
| Cow position: | chr25:16714480-16714173 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 138-460 |
| Cow position: | chr25:13272363-13272698 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 141-444 |
| Cow position: | chr25:13294703-13294986 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 141-466 |
| Cow position: | chr25:17704546-17704876 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 148-446 |
| Cow position: | chr25:25861556-25861239 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 149-370 |
| Cow position: | chr25:12755686-12755459 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 151-450 |
| Cow position: | chr25:13672195-13672519 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 152-414 |
| Cow position: | chr25:17342257-17342538 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 155-453 |
| Cow position: | chr25:18905692-18906006 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 155-460 |
| Cow position: | chr25:11315722-11316027 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 157-358 |
| Cow position: | chr25:23323015-23323216 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 153 |
| Conread position: | 166-458 |
| Cow position: | chr25:24651630-24651332 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 166-458 |
| Cow position: | chr25:32277777-32277483 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 103, 192 |
| Conread position: | 166-460 |
| Cow position: | chr25:36017361-36017659 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 169-385 |
| Cow position: | chr25:11318835-11319046 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 126 |
| Conread position: | 171-445 |
| Cow position: | chr25:18894892-18894615 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 53 |
| Conread position: | 177-453 |
| Cow position: | chr25:30462466-30462190 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 178-445 |
| Cow position: | chr25:26679062-26679337 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 118, 47 |
| Conread position: | 178-460 |
| Cow position: | chr25:9002509-9002797 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 192, 116 |
| Conread position: | 181-418 |
| Cow position: | chr25:19317095-19317349 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 181-466 |
| Cow position: | chr25:21893175-21893471 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 185-435 |
| Cow position: | chr25:5920778-5921045 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 186-459 |
| Cow position: | chr25:7380998-7380711 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 187-465 |
| Cow position: | chr25:5474383-5474099 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 191-444 |
| Cow position: | chr25:8961621-8961880 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 191-457 |
| Cow position: | chr25:23779478-23779207 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 194-447 |
| Cow position: | chr25:6687800-6688058 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 194-460 |
| Cow position: | chr25:30618916-30619191 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 197-448 |
| Cow position: | chr25:22751156-22750892 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 212-461 |
| Cow position: | chr25:14157490-14157753 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 212-469 |
| Cow position: | chr25:18202058-18201794 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 114 |
| Conread position: | 212-469 |
| Cow position: | chr25:24203124-24202877 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 236-471 |
| Cow position: | chr25:36555798-36555549 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 238-444 |
| Cow position: | chr25:30816779-30816999 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 238-445 |
| Cow position: | chr25:17119638-17119853 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 238-456 |
| Cow position: | chr25:12252919-12252687 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 238-460 |
| Cow position: | chr25:1824202-1823970 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 244-460 |
| Cow position: | chr25:13443514-13443284 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 245-445 |
| Cow position: | chr25:30449942-30450143 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 141 |
| Conread position: | 249-460 |
| Cow position: | chr25:25716557-25716770 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 251-453 |
| Cow position: | chr25:36120408-36120617 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 257-452 |
| Cow position: | chr25:23817936-23817721 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 258-445 |
| Cow position: | chr25:26051814-26052013 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 191 |
| Conread position: | 259-459 |
| Cow position: | chr25:12806958-12807163 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 296-466 |
| Cow position: | chr25:17403438-17403613 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 324-464 |
| Cow position: | chr25:15218118-15218262 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 338-466 |
| Cow position: | chr25:5922707-5922574 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.