Cow genome map

Conread name: rova038_i13.y1

Conread position: 2-444
Cow position:
Alignm length: 449
Alignm identity: 296
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 126, 11

Conread position: 5-260
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 127, 0

Conread position: 5-283
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 123

Conread position: 5-287
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 55

Conread position: 5-371
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 123, 64

Conread position: 5-426
Cow position:
Alignm length: 436
Alignm identity: 288
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 108, 155

Conread position: 5-445
Cow position:
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 226

Conread position: 5-448
Cow position:
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 69

Conread position: 5-450
Cow position:
Alignm length: 457
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 64

Conread position: 5-453
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 200

Conread position: 5-457
Cow position:
Alignm length: 470
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 119

Conread position: 5-459
Cow position:
Alignm length: 477
Alignm identity: 313
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 120

Conread position: 5-460
Cow position:
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 219

Conread position: 5-466
Cow position:
Alignm length: 481
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 104

Conread position: 5-469
Cow position:
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 209

Conread position: 6-290
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 29

Conread position: 6-290
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 49

Conread position: 6-467
Cow position:
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 107

Conread position: 6-481
Cow position:
Alignm length: 491
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 143

Conread position: 7-438
Cow position:
Alignm length: 446
Alignm identity: 296
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 121, 53

Conread position: 9-290
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 9-357
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 78

Conread position: 9-367
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 78

Conread position: 9-458
Cow position:
Alignm length: 455
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 79

Conread position: 13-290
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 115, 29

Conread position: 13-342
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 54, 222

Conread position: 14-436
Cow position:
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 21

Conread position: 14-460
Cow position:
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 267

Conread position: 17-445
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 314

Conread position: 24-466
Cow position:
Alignm length: 482
Alignm identity: 328
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 21

Conread position: 33-457
Cow position:
Alignm length: 439
Alignm identity: 290
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 281, 151

Conread position: 36-460
Cow position:
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 285

Conread position: 37-398
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 91, 150

Conread position: 37-465
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 25

Conread position: 38-446
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 30

Conread position: 39-442
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 154

Conread position: 49-352
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 134

Conread position: 57-290
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 64, 199

Conread position: 57-445
Cow position:
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 57

Conread position: 62-450
Cow position:
Alignm length: 403
Alignm identity: 272
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 53

Conread position: 64-460
Cow position:
Alignm length: 415
Alignm identity: 272
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 92

Conread position: 67-306
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 50

Conread position: 74-466
Cow position:
Alignm length: 409
Alignm identity: 278
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 152

Conread position: 77-358
Cow position:
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 11

Conread position: 77-431
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 154

Conread position: 77-446
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 296, 36

Conread position: 77-453
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 178

Conread position: 77-458
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 71

Conread position: 77-460
Cow position:
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 139

Conread position: 77-486
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 78-457
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 93

Conread position: 78-460
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 113

Conread position: 78-460
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 10

Conread position: 78-465
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 50, 136

Conread position: 78-466
Cow position:
Alignm length: 416
Alignm identity: 278
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 104

Conread position: 80-386
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 34

Conread position: 80-459
Cow position:
Alignm length: 397
Alignm identity: 260
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 183

Conread position: 81-401
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 15

Conread position: 81-460
Cow position:
Alignm length: 409
Alignm identity: 274
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 47, 32

Conread position: 82-365
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 210, 11

Conread position: 87-287
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 87-354
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 70

Conread position: 88-314
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 33

Conread position: 88-356
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 126

Conread position: 88-407
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 113

Conread position: 89-369
Cow position:
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 174

Conread position: 89-465
Cow position:
Alignm length: 391
Alignm identity: 262
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 28

Conread position: 91-466
Cow position:
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 94-466
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 95-460
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 18

Conread position: 99-445
Cow position:
Alignm length: 368
Alignm identity: 234
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 103-460
Cow position:
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 10

Conread position: 104-460
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 213

Conread position: 105-463
Cow position:
Alignm length: 378
Alignm identity: 251
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 125

Conread position: 107-291
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 78

Conread position: 107-446
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 52

Conread position: 116-465
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 12, 91

Conread position: 126-445
Cow position:
Alignm length: 332
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 111

Conread position: 129-460
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 163, 42

Conread position: 132-368
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 54

Conread position: 132-465
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 28

Conread position: 134-453
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 195

Conread position: 137-356
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 141-373
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 59

Conread position: 141-457
Cow position:
Alignm length: 337
Alignm identity: 221
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 285

Conread position: 143-437
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 59

Conread position: 144-449
Cow position:
Alignm length: 316
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 151, 77

Conread position: 147-458
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 44, 23

Conread position: 147-460
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 82

Conread position: 148-489
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 144, 171

Conread position: 151-416
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 165-485
Cow position:
Alignm length: 334
Alignm identity: 214
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 87

Conread position: 166-458
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 5

Conread position: 181-464
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 103

Conread position: 186-463
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 58

Conread position: 186-474
Cow position:
Alignm length: 302
Alignm identity: 208
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 129

Conread position: 192-489
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 5

Conread position: 194-482
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 44

Conread position: 198-453
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 28

Conread position: 198-466
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 212-451
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 30

Conread position: 212-453
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 22

Conread position: 212-456
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 100

Conread position: 218-460
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 15

Conread position: 222-453
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 55

Conread position: 225-469
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 87

Conread position: 226-460
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 15

Conread position: 241-457
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 219

Conread position: 247-449
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 61

Conread position: 254-472
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 40

Conread position: 255-445
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 38

Conread position: 258-479
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 10

Conread position: 261-475
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 126

Conread position: 278-460
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 39

Conread position: 317-460
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 329-466
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.