Cow genome map

Conread name: rova038_i13.y1

Conread position: 2-459
Cow position: chr27:19388313-19387847 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 8

Conread position: 2-460
Cow position: chr27:29831392-29831875 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 7

Conread position: 2-466
Cow position: chr27:22418471-22418947 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 7

Conread position: 2-484
Cow position: chr27:10992663-10992160 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 338
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 7

Conread position: 5-228
Cow position: chr27:2900947-2901175 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 128, 0

Conread position: 5-230
Cow position: chr27:16099723-16099957 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 5-290
Cow position: chr27:16620282-16619997 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 63

Conread position: 5-306
Cow position: chr27:23454856-23455165 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 77

Conread position: 5-355
Cow position: chr27:11413009-11412669 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 16

Conread position: 5-368
Cow position: chr27:19931447-19931082 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 230
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 169, 245

Conread position: 5-400
Cow position: chr27:9090507-9090902 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 223

Conread position: 5-425
Cow position: chr27:30868446-30868877 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 5-439
Cow position: chr27:4805615-4806050 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 44

Conread position: 5-440
Cow position: chr27:11435037-11435472 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 40

Conread position: 5-442
Cow position: chr27:23632890-23632446 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 16

Conread position: 5-446
Cow position: chr27:21977843-21978296 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 123, 177

Conread position: 5-449
Cow position: chr27:27049626-27050068 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 290
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 40

Conread position: 5-451
Cow position: chr27:21393213-21393671 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 38

Conread position: 5-452
Cow position: chr27:8629580-8630035 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 132

Conread position: 5-453
Cow position: chr27:19718210-19717750 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 53

Conread position: 5-453
Cow position: chr27:25411221-25411675 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 184

Conread position: 5-456
Cow position: chr27:1636653-1637103 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 305
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 30

Conread position: 5-456
Cow position: chr27:27064150-27064609 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 55

Conread position: 5-457
Cow position: chr27:4673309-4672843 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 62

Conread position: 5-457
Cow position: chr27:30583031-30582565 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 310
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 123, 83

Conread position: 5-458
Cow position: chr27:8961975-8962420 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 156

Conread position: 5-458
Cow position: chr27:22171592-22171130 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 25

Conread position: 5-459
Cow position: chr27:15866515-15866047 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 88

Conread position: 5-460
Cow position: chr27:17397161-17397626 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 76

Conread position: 5-464
Cow position: chr27:15315783-15315341 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 96

Conread position: 5-466
Cow position: chr27:1768344-1768805 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 56

Conread position: 5-466
Cow position: chr27:20283917-20283461 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 123, 32

Conread position: 5-491
Cow position: chr27:27038546-27039039 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 6-356
Cow position: chr27:21350722-21351082 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 6-368
Cow position: chr27:27040890-27040530 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 40

Conread position: 6-370
Cow position: chr27:26223976-26224346 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 191

Conread position: 6-373
Cow position: chr27:30374261-30374645 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 71, 291

Conread position: 6-440
Cow position: chr27:1123310-1122880 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 16

Conread position: 6-446
Cow position: chr27:22330367-22330824 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 300
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 117

Conread position: 6-449
Cow position: chr27:30177275-30177712 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 288
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 81, 198

Conread position: 6-450
Cow position: chr27:26412965-26413416 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 62

Conread position: 6-453
Cow position: chr27:1353888-1353418 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 120

Conread position: 6-457
Cow position: chr27:26959331-26959784 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 296
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 21

Conread position: 6-460
Cow position: chr27:24227500-24227971 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 199

Conread position: 6-460
Cow position: chr27:26807273-26807736 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 312
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 14

Conread position: 6-466
Cow position: chr27:17473115-17472633 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 27

Conread position: 6-469
Cow position: chr27:27019810-27020278 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 62

Conread position: 6-484
Cow position: chr27:8353757-8353282 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 307
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 185, 69

Conread position: 7-466
Cow position: chr27:299091-299559 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 223

Conread position: 9-339
Cow position: chr27:815655-815321 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 165

Conread position: 9-407
Cow position: chr27:22426539-22426951 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 119

Conread position: 9-445
Cow position: chr27:13876018-13875579 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 90

Conread position: 9-446
Cow position: chr27:15925625-15925188 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 78

Conread position: 9-451
Cow position: chr27:12246936-12246490 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 59

Conread position: 10-399
Cow position: chr27:24999447-24999851 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 76

Conread position: 10-478
Cow position: chr27:20641054-20641522 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 312
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 155

Conread position: 12-283
Cow position: chr27:13409881-13410158 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 116, 187

Conread position: 13-370
Cow position: chr27:732849-732499 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 197, 55

Conread position: 13-451
Cow position: chr27:26581160-26581599 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 301
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 95, 153

Conread position: 13-459
Cow position: chr27:23882079-23882540 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 140

Conread position: 13-460
Cow position: chr27:28931503-28931973 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 13-469
Cow position: chr27:23128740-23128287 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 78

Conread position: 14-414
Cow position: chr27:29400102-29399700 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 58

Conread position: 14-431
Cow position: chr27:26427843-26428275 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 14-457
Cow position: chr27:8942407-8942858 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 32

Conread position: 17-460
Cow position: chr27:22723431-22723866 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 26

Conread position: 26-458
Cow position: chr27:19589748-19589303 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 304
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 102, 70

Conread position: 26-465
Cow position: chr27:31219513-31219084 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 294
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 88, 52

Conread position: 27-403
Cow position: chr27:12429684-12429292 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 90

Conread position: 30-459
Cow position: chr27:30406762-30407209 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 270

Conread position: 31-453
Cow position: chr27:20067719-20068142 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 97, 49

Conread position: 32-356
Cow position: chr27:14902383-14902713 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 33-473
Cow position: chr27:6550717-6550277 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 165

Conread position: 37-466
Cow position: chr27:7412645-7412211 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 191

Conread position: 38-460
Cow position: chr27:23483486-23483054 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 139

Conread position: 39-466
Cow position: chr27:2957664-2957234 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 36

Conread position: 48-280
Cow position: chr27:26436623-26436862 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 65

Conread position: 48-444
Cow position: chr27:26508910-26509309 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 69

Conread position: 49-461
Cow position: chr27:1290618-1291023 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 79

Conread position: 50-351
Cow position: chr27:26398010-26398313 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 54-445
Cow position: chr27:28518530-28518139 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 59

Conread position: 57-452
Cow position: chr27:16284715-16284310 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 57

Conread position: 57-457
Cow position: chr27:10980106-10979694 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 197

Conread position: 59-445
Cow position: chr27:29493677-29494057 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 244
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 54

Conread position: 59-460
Cow position: chr27:24738556-24738971 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 288
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 111

Conread position: 60-459
Cow position: chr27:11815520-11815920 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 68, 166

Conread position: 62-431
Cow position: chr27:6500302-6499918 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 67-460
Cow position: chr27:7934931-7935329 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 124

Conread position: 72-453
Cow position: chr27:23554096-23554493 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 27

Conread position: 72-460
Cow position: chr27:20796011-20795619 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 276
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 94

Conread position: 77-280
Cow position: chr27:22179575-22179775 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 135

Conread position: 77-289
Cow position: chr27:19577896-19577684 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 36

Conread position: 77-367
Cow position: chr27:6523268-6522973 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 225

Conread position: 77-446
Cow position: chr27:10307073-10307455 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 125

Conread position: 77-457
Cow position: chr27:30765254-30764867 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 105

Conread position: 77-460
Cow position: chr27:19661165-19660759 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 86

Conread position: 77-466
Cow position: chr27:12596979-12596599 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 78-358
Cow position: chr27:28038116-28038401 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 257

Conread position: 78-449
Cow position: chr27:4812656-4813041 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 35

Conread position: 78-453
Cow position: chr27:4835385-4835772 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 153

Conread position: 78-459
Cow position: chr27:2592762-2592371 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 80-354
Cow position: chr27:27259827-27259556 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 48, 41

Conread position: 80-457
Cow position: chr27:30354126-30354511 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 34

Conread position: 82-290
Cow position: chr27:22498770-22498566 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 55

Conread position: 82-487
Cow position: chr27:707164-706749 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 276
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 31

Conread position: 83-373
Cow position: chr27:2682927-2683222 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 190
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 99

Conread position: 84-290
Cow position: chr27:22771973-22771760 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 84-459
Cow position: chr27:27640777-27641181 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 29

Conread position: 84-471
Cow position: chr27:18558579-18558178 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 85-469
Cow position: chr27:15668553-15668952 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 28

Conread position: 86-290
Cow position: chr27:16871706-16871904 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 156, 29

Conread position: 86-459
Cow position: chr27:22454565-22454947 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 99

Conread position: 88-460
Cow position: chr27:30359606-30359235 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 52

Conread position: 90-456
Cow position: chr27:16478139-16478504 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 206, 45

Conread position: 90-458
Cow position: chr27:22547197-22547565 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 248
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 91-354
Cow position: chr27:29283203-29283466 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 5

Conread position: 92-460
Cow position: chr27:25277342-25276972 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 93-469
Cow position: chr27:30915207-30914829 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 8

Conread position: 94-443
Cow position: chr27:19685509-19685868 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 91

Conread position: 95-453
Cow position: chr27:19546300-19546677 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 31

Conread position: 96-290
Cow position: chr27:27055781-27055583 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 134

Conread position: 96-460
Cow position: chr27:20354783-20354429 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 76

Conread position: 97-445
Cow position: chr27:27003079-27003415 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 31, 77

Conread position: 100-280
Cow position: chr27:18030860-18031044 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 26

Conread position: 100-367
Cow position: chr27:21569644-21569911 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 110

Conread position: 101-456
Cow position: chr27:28001620-28001980 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 41

Conread position: 107-414
Cow position: chr27:18739580-18739251 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 107-460
Cow position: chr27:16705439-16705079 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 146

Conread position: 108-445
Cow position: chr27:27554495-27554834 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 38

Conread position: 109-290
Cow position: chr27:20592174-20591990 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 113-445
Cow position: chr27:29431642-29431312 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 15

Conread position: 117-460
Cow position: chr27:30988980-30988626 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 118-328
Cow position: chr27:27550566-27550773 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 92

Conread position: 118-450
Cow position: chr27:13252191-13251853 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 106

Conread position: 129-358
Cow position: chr27:22268674-22268439 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 100

Conread position: 129-477
Cow position: chr27:29184673-29185023 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 35

Conread position: 130-451
Cow position: chr27:15408875-15409199 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 166, 95

Conread position: 130-461
Cow position: chr27:9169476-9169811 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 162, 269

Conread position: 131-460
Cow position: chr27:15643343-15643001 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 181

Conread position: 132-307
Cow position: chr27:18434304-18434481 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 126

Conread position: 138-460
Cow position: chr27:27270377-27270715 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 60

Conread position: 141-452
Cow position: chr27:14343310-14343613 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 241, 28

Conread position: 143-437
Cow position: chr27:23891093-23890789 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 91, 43

Conread position: 146-445
Cow position: chr27:28270994-28271307 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 147-459
Cow position: chr27:427124-426798 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 44, 90

Conread position: 149-466
Cow position: chr27:26489752-26490088 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 64

Conread position: 151-453
Cow position: chr27:3306921-3306608 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 76

Conread position: 153-478
Cow position: chr27:20247658-20247993 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 30

Conread position: 159-453
Cow position: chr27:17331642-17331338 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 70

Conread position: 166-460
Cow position: chr27:16103936-16103640 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 44

Conread position: 171-431
Cow position: chr27:715630-715358 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 121, 175

Conread position: 171-469
Cow position: chr27:8168302-8168611 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 181-353
Cow position: chr27:4011796-4011622 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 128

Conread position: 183-443
Cow position: chr27:28245916-28245648 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 130

Conread position: 183-459
Cow position: chr27:26226175-26226460 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 26

Conread position: 183-459
Cow position: chr27:27694657-27694939 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 29

Conread position: 184-467
Cow position: chr27:29380971-29380674 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 5

Conread position: 185-461
Cow position: chr27:24371348-24371070 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 107, 40

Conread position: 187-458
Cow position: chr27:31148871-31148592 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 14

Conread position: 190-412
Cow position: chr27:26135245-26135023 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 20

Conread position: 191-445
Cow position: chr27:7614981-7615237 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 58

Conread position: 196-476
Cow position: chr27:12191387-12191672 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 185, 132

Conread position: 213-452
Cow position: chr27:22559736-22559987 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 216-460
Cow position: chr27:15378396-15378645 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 9

Conread position: 224-452
Cow position: chr27:6925164-6924919 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 225-458
Cow position: chr27:16088883-16088635 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 212

Conread position: 227-453
Cow position: chr27:16965645-16965412 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 238-453
Cow position: chr27:31017773-31017990 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 73

Conread position: 238-457
Cow position: chr27:20812966-20812736 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 238-460
Cow position: chr27:20514882-20514651 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 66

Conread position: 238-466
Cow position: chr27:22225534-22225773 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 238-469
Cow position: chr27:26111848-26112096 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 244-419
Cow position: chr27:21976104-21975922 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 62

Conread position: 254-460
Cow position: chr27:22423554-22423343 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 10

Conread position: 258-458
Cow position: chr27:17918274-17918483 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 61

Conread position: 258-472
Cow position: chr27:29593587-29593814 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 260-459
Cow position: chr27:17646128-17646337 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 188

Conread position: 264-469
Cow position: chr27:14303769-14303554 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 48

Conread position: 325-466
Cow position: chr27:18435162-18435313 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 347-459
Cow position: chr27:22268174-22268056 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.