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Cow genome map

           
Conread name:
           
rova038_i13.y1
        

               
Conread position:
               
2-356
               

               
Cow position:
               
chr28:8682185-8681818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr28:12049047-12048688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr28:11426870-11426404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr28:30967135-30967358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 129
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr28:16215223-16214934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
287, 121
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr28:11451807-11451493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr28:13356914-13356604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr28:7549394-7549054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr28:7590515-7590174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr28:4022050-4022411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 92
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr28:10879442-10879792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr28:17287896-17288254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr28:18790680-18791070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 57
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr28:25806265-25806653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
287, 56
               

               
Conread position:
               
5-409
               

               
Cow position:
               
chr28:21380549-21380963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 88
               

               
Conread position:
               
5-414
               

               
Cow position:
               
chr28:13267449-13267876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr28:5792370-5792800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
5-430
               

               
Cow position:
               
chr28:2814830-2814406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr28:11787038-11786613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr28:21598585-21598133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr28:11585539-11585084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr28:33163789-33163346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr28:8347390-8347850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 187
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr28:26922702-26922245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr28:3914378-3914841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 116
               

               
Conread position:
               
5-453
               

               
Cow position:
               
chr28:30327416-30326964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
5-458
               

               
Cow position:
               
chr28:23530532-23531004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 144
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr28:5203873-5204327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 41
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr28:9285695-9285245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:8022443-8021971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 151
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:12430275-12430737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:16109621-16110072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:19080203-19079712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 192
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:19222477-19222017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 110
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:20124457-20124918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr28:25399558-25400002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr28:16919493-16919031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
5-466
               

               
Cow position:
               
chr28:3144219-3143741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
5-466
               

               
Cow position:
               
chr28:21844624-21845098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
5-466
               

               
Cow position:
               
chr28:21868119-21868601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr28:21363426-21363882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 123
               

               
Conread position:
               
5-479
               

               
Cow position:
               
chr28:12964246-12964721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr28:14933630-14934114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 108
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr28:14150907-14151186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr28:17738409-17738121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr28:22171060-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr28:17316533-17316886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr28:18717456-18717109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr28:15272590-15272160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr28:22132595-22133026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 179
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr28:7865000-7865448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr28:23675817-23676257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 59
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr28:5817521-5817963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 35
               

               
Conread position:
               
6-453
               

               
Cow position:
               
chr28:9426673-9426224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 154
               

               
Conread position:
               
6-453
               

               
Cow position:
               
chr28:11752476-11752013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 233
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr28:6971670-6971214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr28:20312943-20313410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr28:28766240-28765770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr28:31648746-31649208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr28:8787219-8787683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 118
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr28:10606943-10606493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 87
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr28:7268264-7267804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
6-490
               

               
Cow position:
               
chr28:26614564-26615041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
228, 111
               

               
Conread position:
               
7-278
               

               
Cow position:
               
chr28:16441060-16441324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr28:13473977-13474442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr28:21104172-21103697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
10-467
               

               
Cow position:
               
chr28:4282819-4282350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 240
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr28:10744880-10745294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr28:19222918-19222566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
13-446
               

               
Cow position:
               
chr28:16085001-16085444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
14-435
               

               
Cow position:
               
chr28:7512913-7512476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
15-455
               

               
Cow position:
               
chr28:34561036-34561471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 161
               

               
Conread position:
               
17-460
               

               
Cow position:
               
chr28:4308218-4307761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 146
               

               
Conread position:
               
20-488
               

               
Cow position:
               
chr28:26684798-26685272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr28:7698290-7697845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
24-466
               

               
Cow position:
               
chr28:5931034-5931490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
29-460
               

               
Cow position:
               
chr28:6059775-6059337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
32-290
               

               
Cow position:
               
chr28:24368245-24367979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
36-409
               

               
Cow position:
               
chr28:31987303-31987696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
38-450
               

               
Cow position:
               
chr28:23008027-23007606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
41-437
               

               
Cow position:
               
chr28:15044152-15043752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
57-343
               

               
Cow position:
               
chr28:26784748-26784455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 275
               

               
Conread position:
               
61-453
               

               
Cow position:
               
chr28:18354595-18354201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
62-405
               

               
Cow position:
               
chr28:15263999-15263640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
63-460
               

               
Cow position:
               
chr28:26743348-26743759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
75-465
               

               
Cow position:
               
chr28:3493046-3492644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr28:10172675-10172283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr28:27428492-27428748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
77-437
               

               
Cow position:
               
chr28:13176939-13176579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 170
               

               
Conread position:
               
77-460
               

               
Cow position:
               
chr28:4841657-4841257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
77-463
               

               
Cow position:
               
chr28:26719100-26719479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 84
               

               
Conread position:
               
78-373
               

               
Cow position:
               
chr28:16253114-16252818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 46
               

               
Conread position:
               
78-375
               

               
Cow position:
               
chr28:25424562-25424254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
78-458
               

               
Cow position:
               
chr28:25249096-25249487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
78-458
               

               
Cow position:
               
chr28:29434684-29434295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
78-460
               

               
Cow position:
               
chr28:19026262-19025870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
78-466
               

               
Cow position:
               
chr28:24996848-24996475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
79-341
               

               
Cow position:
               
chr28:6861695-6861961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
79-373
               

               
Cow position:
               
chr28:21502137-21502430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
80-354
               

               
Cow position:
               
chr28:6307635-6307911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
80-446
               

               
Cow position:
               
chr28:30608438-30608068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
80-452
               

               
Cow position:
               
chr28:24343109-24343491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
80-457
               

               
Cow position:
               
chr28:16370332-16369953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
80-458
               

               
Cow position:
               
chr28:23410581-23410192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
82-436
               

               
Cow position:
               
chr28:2862606-2862977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
82-446
               

               
Cow position:
               
chr28:13865590-13865958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
82-460
               

               
Cow position:
               
chr28:33051765-33052169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
83-459
               

               
Cow position:
               
chr28:9740217-9740602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
84-437
               

               
Cow position:
               
chr28:1837743-1838095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
84-466
               

               
Cow position:
               
chr28:25596379-25596767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
85-290
               

               
Cow position:
               
chr28:13242076-13241875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
85-370
               

               
Cow position:
               
chr28:13607633-13607925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
85-453
               

               
Cow position:
               
chr28:3078930-3078556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
85-459
               

               
Cow position:
               
chr28:16386758-16386386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
85-460
               

               
Cow position:
               
chr28:5236852-5236471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
87-459
               

               
Cow position:
               
chr28:22321172-22321552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
87-460
               

               
Cow position:
               
chr28:8408486-8408869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
88-457
               

               
Cow position:
               
chr28:2898746-2899119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 209
               

               
Conread position:
               
94-465
               

               
Cow position:
               
chr28:11423047-11422672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
198, 82
               

               
Conread position:
               
97-367
               

               
Cow position:
               
chr28:4914342-4914059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
98-461
               

               
Cow position:
               
chr28:9636696-9636323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 132
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr28:5658317-5658545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
101-364
               

               
Cow position:
               
chr28:28076644-28076390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
101-440
               

               
Cow position:
               
chr28:16204570-16204222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
101-444
               

               
Cow position:
               
chr28:34430663-34430308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 211
               

               
Conread position:
               
103-290
               

               
Cow position:
               
chr28:3077759-3077942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
103-466
               

               
Cow position:
               
chr28:11884757-11884382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
106-460
               

               
Cow position:
               
chr28:5144754-5144388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
107-457
               

               
Cow position:
               
chr28:9099704-9100056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
107-466
               

               
Cow position:
               
chr28:12951202-12951560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
108-460
               

               
Cow position:
               
chr28:750997-751360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
110-460
               

               
Cow position:
               
chr28:10053566-10053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
115-352
               

               
Cow position:
               
chr28:10478565-10478326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
117-445
               

               
Cow position:
               
chr28:11818180-11817846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
74, 87
               

               
Conread position:
               
118-420
               

               
Cow position:
               
chr28:18625003-18625327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
121-445
               

               
Cow position:
               
chr28:5224495-5224817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr28:3714591-3714832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
173, 111
               

               
Conread position:
               
132-469
               

               
Cow position:
               
chr28:5437296-5436947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
136-365
               

               
Cow position:
               
chr28:25459325-25459564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
138-457
               

               
Cow position:
               
chr28:4158753-4159085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
142-466
               

               
Cow position:
               
chr28:4881440-4881099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 174
               

               
Conread position:
               
145-469
               

               
Cow position:
               
chr28:26982938-26982596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
46, 185
               

               
Conread position:
               
147-458
               

               
Cow position:
               
chr28:23724645-23724331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 92
               

               
Conread position:
               
149-358
               

               
Cow position:
               
chr28:118243-118027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
150-469
               

               
Cow position:
               
chr28:11829129-11828820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
151-358
               

               
Cow position:
               
chr28:19023947-19024168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
151-453
               

               
Cow position:
               
chr28:18760228-18759929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
151-466
               

               
Cow position:
               
chr28:11866855-11866524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
153-460
               

               
Cow position:
               
chr28:2752684-2752361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
159-460
               

               
Cow position:
               
chr28:2132100-2131789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr28:4016368-4016669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
171-459
               

               
Cow position:
               
chr28:4643928-4643634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
181-456
               

               
Cow position:
               
chr28:1632810-1632528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
186-458
               

               
Cow position:
               
chr28:30746878-30746599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
186-459
               

               
Cow position:
               
chr28:25728049-25728323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
194-459
               

               
Cow position:
               
chr28:27161472-27161195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
198-437
               

               
Cow position:
               
chr28:32365708-32365953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr28:7009112-7008845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
212-446
               

               
Cow position:
               
chr28:11346609-11346368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
216-485
               

               
Cow position:
               
chr28:32174511-32174789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
225-445
               

               
Cow position:
               
chr28:5166654-5166885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
227-453
               

               
Cow position:
               
chr28:34248133-34247905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
227-458
               

               
Cow position:
               
chr28:19564338-19564097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
241-445
               

               
Cow position:
               
chr28:7372218-7372004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
248-460
               

               
Cow position:
               
chr28:7388857-7388639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
253-459
               

               
Cow position:
               
chr28:25677432-25677209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
254-481
               

               
Cow position:
               
chr28:13090609-13090370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
259-460
               

               
Cow position:
               
chr28:3161032-3160820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
280-466
               

               
Cow position:
               
chr28:2279645-2279458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
310-466
               

               
Cow position:
               
chr28:21008690-21008526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 161
               

               
Conread position:
               
316-469
               

               
Cow position:
               
chr28:18770065-18770222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               
Show alignments to all cow chromosomes.