Cow genome map
| Conread name: | rova040_k2.y1 |
| Conread position: | 1-121 |
| Cow position: | chr13:23444650-23444779 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-142 |
| Cow position: | chr13:32717716-32717859 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-144 |
| Cow position: | chr13:47502563-47502711 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 1-144 |
| Cow position: | chr13:54864875-54865018 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 1-147 |
| Cow position: | chr13:1766927-1766780 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 1-150 |
| Cow position: | chr13:1839541-1839389 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-157 |
| Cow position: | chr13:2302678-2302841 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 1-163 |
| Cow position: | chr13:37516977-37517139 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 144 |
| Conread position: | 1-165 |
| Cow position: | chr13:24822608-24822772 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 153, 21 |
| Conread position: | 1-170 |
| Cow position: | chr13:14227086-14226917 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 1-170 |
| Cow position: | chr13:46985171-46985004 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 1-175 |
| Cow position: | chr13:17800231-17800056 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 1-184 |
| Cow position: | chr13:34118142-34118330 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 65, 92 |
| Conread position: | 1-186 |
| Cow position: | chr13:23586282-23586090 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 1-187 |
| Cow position: | chr13:8838835-8839017 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 1-188 |
| Cow position: | chr13:19178435-19178244 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 142 |
| Conread position: | 1-188 |
| Cow position: | chr13:47964040-47964219 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 1-189 |
| Cow position: | chr13:7790173-7789978 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 1-192 |
| Cow position: | chr13:20041802-20042002 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 1-195 |
| Cow position: | chr13:6759630-6759831 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 1-195 |
| Cow position: | chr13:54094965-54094775 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 1-197 |
| Cow position: | chr13:1779992-1779792 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 139 |
| Conread position: | 1-198 |
| Cow position: | chr13:1155549-1155742 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 162, 87 |
| Conread position: | 1-198 |
| Cow position: | chr13:13954229-13954431 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 144 |
| Conread position: | 1-198 |
| Cow position: | chr13:17346966-17346768 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 1-198 |
| Cow position: | chr13:21276014-21275821 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 136 |
| Conread position: | 1-198 |
| Cow position: | chr13:22886833-22887032 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 153 |
| Conread position: | 1-198 |
| Cow position: | chr13:35653933-35654134 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 1-198 |
| Cow position: | chr13:55843642-55843441 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 146 |
| Conread position: | 1-203 |
| Cow position: | chr13:4420506-4420299 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 1-207 |
| Cow position: | chr13:29631017-29630807 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-208 |
| Cow position: | chr13:38898094-38898293 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 1-210 |
| Cow position: | chr13:21039439-21039651 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 1-210 |
| Cow position: | chr13:33631279-33631077 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-210 |
| Cow position: | chr13:41253776-41253569 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 1-212 |
| Cow position: | chr13:29814704-29814488 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 1-212 |
| Cow position: | chr13:47188601-47188386 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 1-214 |
| Cow position: | chr13:10932711-10932498 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 1-214 |
| Cow position: | chr13:12233298-12233502 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 1-225 |
| Cow position: | chr13:24230371-24230151 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 136 |
| Conread position: | 1-231 |
| Cow position: | chr13:46181948-46181723 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 1-232 |
| Cow position: | chr13:8201327-8201553 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 1-233 |
| Cow position: | chr13:60329909-60329683 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 1-247 |
| Cow position: | chr13:5758186-5758426 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 1-247 |
| Cow position: | chr13:23166937-23167185 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 144 |
| Conread position: | 1-258 |
| Cow position: | chr13:25531629-25531885 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 80, 179 |
| Conread position: | 1-261 |
| Cow position: | chr13:51940890-51940637 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 2-111 |
| Cow position: | chr13:11290663-11290774 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 106 |
| Conread position: | 2-123 |
| Cow position: | chr13:22025551-22025675 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-141 |
| Cow position: | chr13:46501462-46501316 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-186 |
| Cow position: | chr13:46458780-46458592 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 2-188 |
| Cow position: | chr13:46636973-46637153 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 149, 61 |
| Conread position: | 2-188 |
| Cow position: | chr13:56842735-56842918 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 169, 15 |
| Conread position: | 2-188 |
| Cow position: | chr13:57745941-57746133 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 140 |
| Conread position: | 2-198 |
| Cow position: | chr13:43184715-43184913 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 2-198 |
| Cow position: | chr13:57494025-57494228 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 126 |
| Conread position: | 2-208 |
| Cow position: | chr13:46430143-46430355 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 56, 208 |
| Conread position: | 2-212 |
| Cow position: | chr13:12207201-12206998 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 2-231 |
| Cow position: | chr13:58484913-58484702 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-232 |
| Cow position: | chr13:32657636-32657870 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 171 |
| Conread position: | 3-160 |
| Cow position: | chr13:7262546-7262389 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 3-214 |
| Cow position: | chr13:9665222-9665007 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 64, 156 |
| Conread position: | 3-218 |
| Cow position: | chr13:11767885-11768100 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 146 |
| Conread position: | 3-218 |
| Cow position: | chr13:25537789-25537567 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 211 |
| Conread position: | 4-186 |
| Cow position: | chr13:8245180-8245359 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 4-188 |
| Cow position: | chr13:13265963-13265778 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 4-188 |
| Cow position: | chr13:43762326-43762140 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 4-198 |
| Cow position: | chr13:46284462-46284656 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 4-214 |
| Cow position: | chr13:12521622-12521831 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 4-238 |
| Cow position: | chr13:60974239-60973998 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 5-253 |
| Cow position: | chr13:17568944-17569190 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 8-165 |
| Cow position: | chr13:60429922-60430080 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 8-188 |
| Cow position: | chr13:25434973-25435151 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 8-188 |
| Cow position: | chr13:34931142-34931318 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 8-188 |
| Cow position: | chr13:37558431-37558249 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 8-198 |
| Cow position: | chr13:9803223-9803025 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-198 |
| Cow position: | chr13:30026268-30026071 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-211 |
| Cow position: | chr13:34333786-34333990 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 9-188 |
| Cow position: | chr13:41154881-41155062 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 9-198 |
| Cow position: | chr13:20466132-20466323 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 10-232 |
| Cow position: | chr13:20649829-20650056 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 12-181 |
| Cow position: | chr13:14085329-14085169 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 12-188 |
| Cow position: | chr13:4423335-4423517 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 12-188 |
| Cow position: | chr13:17886645-17886477 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 12-212 |
| Cow position: | chr13:20180565-20180363 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 12-232 |
| Cow position: | chr13:13176798-13176580 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 13-129 |
| Cow position: | chr13:24767532-24767413 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 13-139 |
| Cow position: | chr13:50823410-50823533 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-142 |
| Cow position: | chr13:6945515-6945381 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-147 |
| Cow position: | chr13:24285706-24285569 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 13-153 |
| Cow position: | chr13:21235540-21235682 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 13-154 |
| Cow position: | chr13:24539639-24539493 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 51, 86 |
| Conread position: | 13-160 |
| Cow position: | chr13:38691397-38691549 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 55 |
| Conread position: | 13-181 |
| Cow position: | chr13:39699951-39699783 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 157, 130 |
| Conread position: | 13-187 |
| Cow position: | chr13:9125817-9125638 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 166 |
| Conread position: | 13-188 |
| Cow position: | chr13:4604438-4604263 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 124 |
| Conread position: | 13-188 |
| Cow position: | chr13:33282157-33281976 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 139 |
| Conread position: | 13-193 |
| Cow position: | chr13:62474656-62474832 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 13-195 |
| Cow position: | chr13:50739313-50739129 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 50, 131 |
| Conread position: | 13-198 |
| Cow position: | chr13:661490-661683 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 13-198 |
| Cow position: | chr13:4208671-4208856 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 13-198 |
| Cow position: | chr13:11954963-11955153 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 13-198 |
| Cow position: | chr13:14717190-14717378 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 13-198 |
| Cow position: | chr13:18350984-18350793 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 13-198 |
| Cow position: | chr13:45023065-45023250 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 110 |
| Conread position: | 13-203 |
| Cow position: | chr13:1042814-1043012 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 145 |
| Conread position: | 13-207 |
| Cow position: | chr13:7010612-7010422 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 159, 112 |
| Conread position: | 13-209 |
| Cow position: | chr13:8607376-8607570 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 13-209 |
| Cow position: | chr13:22277023-22277225 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 13-212 |
| Cow position: | chr13:13577885-13578083 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 13-212 |
| Cow position: | chr13:17622428-17622238 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 13-212 |
| Cow position: | chr13:34995183-34995379 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 13-214 |
| Cow position: | chr13:6621453-6621644 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 52 |
| Conread position: | 13-214 |
| Cow position: | chr13:49848068-49847870 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 13-225 |
| Cow position: | chr13:1959154-1958944 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 13-235 |
| Cow position: | chr13:24369727-24369509 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 148 |
| Conread position: | 13-242 |
| Cow position: | chr13:16024740-16024510 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 13-253 |
| Cow position: | chr13:6060863-6061097 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 14-158 |
| Cow position: | chr13:24280388-24280246 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 14-184 |
| Cow position: | chr13:16343830-16343658 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 14-203 |
| Cow position: | chr13:52879554-52879369 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 17-195 |
| Cow position: | chr13:34761817-34761641 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 17-196 |
| Cow position: | chr13:57325958-57326140 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 17-198 |
| Cow position: | chr13:9593651-9593467 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 124 |
| Conread position: | 17-198 |
| Cow position: | chr13:14771600-14771414 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 17-213 |
| Cow position: | chr13:56673824-56674023 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 17-218 |
| Cow position: | chr13:30510198-30510000 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 17-218 |
| Cow position: | chr13:60487317-60487516 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 17-232 |
| Cow position: | chr13:8524478-8524688 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 17-253 |
| Cow position: | chr13:19188444-19188212 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 126 |
| Conread position: | 18-189 |
| Cow position: | chr13:33975559-33975382 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 18-214 |
| Cow position: | chr13:20057314-20057497 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 19-188 |
| Cow position: | chr13:42071154-42070988 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 19-214 |
| Cow position: | chr13:11834333-11834531 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 50, 164 |
| Conread position: | 19-225 |
| Cow position: | chr13:20839704-20839500 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 120 |
| Conread position: | 23-179 |
| Cow position: | chr13:548639-548484 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 24-198 |
| Cow position: | chr13:32773501-32773319 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 103 |
| Conread position: | 26-214 |
| Cow position: | chr13:12745805-12745620 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 27-208 |
| Cow position: | chr13:35719008-35719188 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 29-197 |
| Cow position: | chr13:34191311-34191479 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 30-218 |
| Cow position: | chr13:33160862-33161052 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 39-198 |
| Cow position: | chr13:21563863-21563702 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 42-198 |
| Cow position: | chr13:15945595-15945443 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 45-191 |
| Cow position: | chr13:1846013-1845867 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 45-197 |
| Cow position: | chr13:16327773-16327623 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 46-197 |
| Cow position: | chr13:22075787-22075632 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 49-176 |
| Cow position: | chr13:47322293-47322426 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 49-212 |
| Cow position: | chr13:13446053-13446205 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 56-198 |
| Cow position: | chr13:54969705-54969843 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 58-236 |
| Cow position: | chr13:54080717-54080890 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 176, 45 |
| Conread position: | 59-187 |
| Cow position: | chr13:12324280-12324154 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 62-198 |
| Cow position: | chr13:32167222-32167354 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 65-203 |
| Cow position: | chr13:54695824-54695961 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 70-191 |
| Cow position: | chr13:54471098-54470978 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 75-210 |
| Cow position: | chr13:49200718-49200584 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 77-197 |
| Cow position: | chr13:33954950-33955067 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 86-201 |
| Cow position: | chr13:6894107-6893992 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 94-218 |
| Cow position: | chr13:29773496-29773617 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 297-483 |
| Cow position: | chr13:46394545-46394363 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 317-410 |
| Cow position: | chr13:22075630-22075536 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.