Cow genome map
| Conread name: | rova040_k2.y1 |
| Conread position: | 1-131 |
| Cow position: | chr17:17452736-17452604 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 1-131 |
| Cow position: | chr17:21419299-21419437 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-137 |
| Cow position: | chr17:14060909-14060767 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-140 |
| Cow position: | chr17:16895430-16895295 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-140 |
| Cow position: | chr17:19756033-19755891 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 1-141 |
| Cow position: | chr17:10790179-10790326 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 1-141 |
| Cow position: | chr17:35990964-35991108 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-142 |
| Cow position: | chr17:3270182-3270323 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-142 |
| Cow position: | chr17:5041809-5041670 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-144 |
| Cow position: | chr17:34628614-34628466 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-147 |
| Cow position: | chr17:908613-908759 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 1-154 |
| Cow position: | chr17:2079627-2079784 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 1-165 |
| Cow position: | chr17:7595024-7595199 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 1-172 |
| Cow position: | chr17:8861318-8861142 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-175 |
| Cow position: | chr17:27780721-27780897 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 1-177 |
| Cow position: | chr17:15363695-15363519 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 147 |
| Conread position: | 1-177 |
| Cow position: | chr17:37775988-37776163 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 1-184 |
| Cow position: | chr17:21312938-21312759 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 1-184 |
| Cow position: | chr17:33926258-33926073 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 1-185 |
| Cow position: | chr17:10634190-10634007 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 1-188 |
| Cow position: | chr17:8279842-8279653 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 153 |
| Conread position: | 1-188 |
| Cow position: | chr17:13143823-13143634 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 142 |
| Conread position: | 1-188 |
| Cow position: | chr17:13236858-13236668 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 1-191 |
| Cow position: | chr17:4141011-4140826 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 1-191 |
| Cow position: | chr17:13672203-13672015 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 81 |
| Conread position: | 1-191 |
| Cow position: | chr17:20990327-20990136 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 96 |
| Conread position: | 1-192 |
| Cow position: | chr17:11921415-11921216 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-196 |
| Cow position: | chr17:1526491-1526289 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 1-196 |
| Cow position: | chr17:25707822-25708022 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 1-196 |
| Cow position: | chr17:42347354-42347160 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 1-197 |
| Cow position: | chr17:923745-923942 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-198 |
| Cow position: | chr17:144308-144111 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 1-198 |
| Cow position: | chr17:3781912-3782111 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 80, 102 |
| Conread position: | 1-198 |
| Cow position: | chr17:8690575-8690377 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 147 |
| Conread position: | 1-198 |
| Cow position: | chr17:12536601-12536401 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 1-198 |
| Cow position: | chr17:23147295-23147483 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 1-198 |
| Cow position: | chr17:26084901-26085094 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 63, 139 |
| Conread position: | 1-198 |
| Cow position: | chr17:32457712-32457501 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-198 |
| Cow position: | chr17:33999177-33998987 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-198 |
| Cow position: | chr17:34864439-34864639 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 1-198 |
| Cow position: | chr17:35212233-35212434 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-208 |
| Cow position: | chr17:25590369-25590162 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 150 |
| Conread position: | 1-210 |
| Cow position: | chr17:2006570-2006772 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 1-210 |
| Cow position: | chr17:11304904-11305109 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 1-211 |
| Cow position: | chr17:19891482-19891699 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 118 |
| Conread position: | 1-217 |
| Cow position: | chr17:5246762-5246979 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 1-217 |
| Cow position: | chr17:18860852-18860637 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 1-224 |
| Cow position: | chr17:20216038-20216257 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 111, 9 |
| Conread position: | 1-227 |
| Cow position: | chr17:27048026-27048247 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 1-229 |
| Cow position: | chr17:23879959-23879730 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 1-232 |
| Cow position: | chr17:1035734-1035501 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 148 |
| Conread position: | 1-232 |
| Cow position: | chr17:7142731-7142957 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 1-232 |
| Cow position: | chr17:10459069-10458836 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 1-232 |
| Cow position: | chr17:37778750-37778523 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 1-253 |
| Cow position: | chr17:24077268-24077516 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 170 |
| Conread position: | 2-147 |
| Cow position: | chr17:18494648-18494499 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 2-193 |
| Cow position: | chr17:25541945-25541758 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 148, 68 |
| Conread position: | 2-195 |
| Cow position: | chr17:18824658-18824852 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-211 |
| Cow position: | chr17:11374823-11374622 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 2-215 |
| Cow position: | chr17:20208953-20208748 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 3-188 |
| Cow position: | chr17:12059222-12059038 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 3-191 |
| Cow position: | chr17:24880613-24880801 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 3-196 |
| Cow position: | chr17:42435763-42435580 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-216 |
| Cow position: | chr17:30204525-30204741 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 198 |
| Conread position: | 4-198 |
| Cow position: | chr17:28539898-28540094 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 4-216 |
| Cow position: | chr17:37342612-37342407 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 4-231 |
| Cow position: | chr17:13922349-13922578 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 144 |
| Conread position: | 4-262 |
| Cow position: | chr17:12591037-12591298 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 130 |
| Conread position: | 8-198 |
| Cow position: | chr17:38276561-38276746 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 128 |
| Conread position: | 9-198 |
| Cow position: | chr17:27697826-27697633 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 11-214 |
| Cow position: | chr17:18569041-18568855 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 12-181 |
| Cow position: | chr17:37415018-37414846 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 13-137 |
| Cow position: | chr17:12216194-12216066 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 13-141 |
| Cow position: | chr17:1094637-1094505 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 13-185 |
| Cow position: | chr17:8926337-8926162 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 13-186 |
| Cow position: | chr17:27819182-27819361 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 13-188 |
| Cow position: | chr17:20993161-20992983 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 13-188 |
| Cow position: | chr17:41811700-41811867 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 13-189 |
| Cow position: | chr17:24580417-24580239 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 128 |
| Conread position: | 13-193 |
| Cow position: | chr17:36533257-36533430 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 13-195 |
| Cow position: | chr17:25755667-25755858 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 13-196 |
| Cow position: | chr17:37138640-37138825 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 13-197 |
| Cow position: | chr17:39012601-39012786 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 78 |
| Conread position: | 13-198 |
| Cow position: | chr17:7132572-7132376 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 13-198 |
| Cow position: | chr17:15664547-15664741 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 13-198 |
| Cow position: | chr17:22564060-22564252 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-198 |
| Cow position: | chr17:25181266-25181079 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 13-198 |
| Cow position: | chr17:26162547-26162359 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 13-198 |
| Cow position: | chr17:44232836-44232648 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 13-203 |
| Cow position: | chr17:10271374-10271565 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 13-211 |
| Cow position: | chr17:28847785-28847586 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 13-213 |
| Cow position: | chr17:36217302-36217105 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 13-214 |
| Cow position: | chr17:13989292-13989094 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 27, 89 |
| Conread position: | 13-217 |
| Cow position: | chr17:7614499-7614298 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 13-217 |
| Cow position: | chr17:15450235-15450444 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 13-218 |
| Cow position: | chr17:28359724-28359924 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 13-232 |
| Cow position: | chr17:6328991-6329211 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 13-235 |
| Cow position: | chr17:1653813-1653593 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 14-197 |
| Cow position: | chr17:11171679-11171856 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 15-198 |
| Cow position: | chr17:23803339-23803524 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 17-149 |
| Cow position: | chr17:25740835-25740972 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 17-175 |
| Cow position: | chr17:27429465-27429620 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 17-187 |
| Cow position: | chr17:21373563-21373731 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 17-187 |
| Cow position: | chr17:41892181-41892008 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 17-198 |
| Cow position: | chr17:3466715-3466892 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 17-198 |
| Cow position: | chr17:18245960-18246145 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 19-134 |
| Cow position: | chr17:16307263-16307382 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-195 |
| Cow position: | chr17:3042358-3042538 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 21-198 |
| Cow position: | chr17:10308142-10307964 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 21-198 |
| Cow position: | chr17:10423970-10424146 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 21-223 |
| Cow position: | chr17:10561517-10561724 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 125 |
| Conread position: | 23-147 |
| Cow position: | chr17:25340265-25340134 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 29-144 |
| Cow position: | chr17:14683678-14683798 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 31-197 |
| Cow position: | chr17:6570241-6570073 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 32-198 |
| Cow position: | chr17:25145423-25145260 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 39-191 |
| Cow position: | chr17:18815124-18815276 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 39-198 |
| Cow position: | chr17:5787929-5787769 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 39-218 |
| Cow position: | chr17:11344122-11344300 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 156 |
| Conread position: | 43-178 |
| Cow position: | chr17:20608452-20608592 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 49-198 |
| Cow position: | chr17:27257317-27257163 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 56-218 |
| Cow position: | chr17:1469299-1469461 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 148 |
| Conread position: | 57-191 |
| Cow position: | chr17:5986147-5986011 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 65-198 |
| Cow position: | chr17:4085690-4085822 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 70-198 |
| Cow position: | chr17:33903982-33903854 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-214 |
| Cow position: | chr17:2270936-2271078 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 48 |
| Conread position: | 77-228 |
| Cow position: | chr17:13716092-13715942 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 126 |
| Conread position: | 82-191 |
| Cow position: | chr17:5296906-5296796 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-210 |
| Cow position: | chr17:8293816-8293707 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 283-410 |
| Cow position: | chr17:7595183-7595310 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 284-410 |
| Cow position: | chr17:32457535-32457409 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 316-409 |
| Cow position: | chr17:30236261-30236352 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 316-413 |
| Cow position: | chr17:38139574-38139672 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.