Cow genome map
| Conread name: | rova040_k2.y1 |
| Conread position: | 1-116 |
| Cow position: | chr26:21339668-21339787 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-140 |
| Cow position: | chr26:19769242-19769099 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-165 |
| Cow position: | chr26:23272626-23272794 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 1-178 |
| Cow position: | chr26:10292440-10292611 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 1-186 |
| Cow position: | chr26:2769997-2769810 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 58, 98 |
| Conread position: | 1-188 |
| Cow position: | chr26:9666564-9666376 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 1-198 |
| Cow position: | chr26:3756076-3756267 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 1-198 |
| Cow position: | chr26:5246645-5246438 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 1-198 |
| Cow position: | chr26:14924327-14924526 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 1-203 |
| Cow position: | chr26:19648771-19648964 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 173, 64 |
| Conread position: | 1-203 |
| Cow position: | chr26:32866045-32865847 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 1-210 |
| Cow position: | chr26:12669041-12669250 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 1-214 |
| Cow position: | chr26:16604131-16604341 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-214 |
| Cow position: | chr26:19110745-19110968 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 173 |
| Conread position: | 1-215 |
| Cow position: | chr26:30605520-30605302 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 1-232 |
| Cow position: | chr26:19774461-19774227 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 1-232 |
| Cow position: | chr26:21859667-21859896 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 2-197 |
| Cow position: | chr26:17289050-17289246 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 3-214 |
| Cow position: | chr26:17204295-17204090 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 4-159 |
| Cow position: | chr26:7103186-7103026 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-187 |
| Cow position: | chr26:2389202-2389024 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 4-228 |
| Cow position: | chr26:9632522-9632295 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 4-232 |
| Cow position: | chr26:14175126-14175354 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 7-198 |
| Cow position: | chr26:27585623-27585816 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 8-203 |
| Cow position: | chr26:18692279-18692466 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 8-212 |
| Cow position: | chr26:6475582-6475375 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 8-214 |
| Cow position: | chr26:14080565-14080761 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 10-153 |
| Cow position: | chr26:33227661-33227809 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-148 |
| Cow position: | chr26:8504116-8504258 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 12-214 |
| Cow position: | chr26:2609946-2609751 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-218 |
| Cow position: | chr26:783077-782871 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 13-137 |
| Cow position: | chr26:4664574-4664450 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-140 |
| Cow position: | chr26:6828025-6828155 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 13-158 |
| Cow position: | chr26:17675878-17675729 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 105 |
| Conread position: | 13-180 |
| Cow position: | chr26:31794628-31794797 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 13-183 |
| Cow position: | chr26:2246809-2246983 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 13-188 |
| Cow position: | chr26:20129816-20129640 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 13-196 |
| Cow position: | chr26:3019569-3019376 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 158 |
| Conread position: | 13-198 |
| Cow position: | chr26:22249623-22249437 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 122 |
| Conread position: | 13-198 |
| Cow position: | chr26:25393886-25394073 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 133 |
| Conread position: | 13-198 |
| Cow position: | chr26:27491646-27491458 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 13-198 |
| Cow position: | chr26:33745772-33745962 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 178 |
| Conread position: | 13-212 |
| Cow position: | chr26:9064206-9064393 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 13-214 |
| Cow position: | chr26:29353652-29353453 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 13-218 |
| Cow position: | chr26:16510641-16510848 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 149 |
| Conread position: | 13-223 |
| Cow position: | chr26:23315625-23315836 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 13-229 |
| Cow position: | chr26:12519873-12520097 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 149 |
| Conread position: | 14-204 |
| Cow position: | chr26:17148560-17148750 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 32-198 |
| Cow position: | chr26:33194521-33194685 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 41-192 |
| Cow position: | chr26:8908656-8908503 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 59-186 |
| Cow position: | chr26:21578174-21578058 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 59-198 |
| Cow position: | chr26:17155419-17155281 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 62-194 |
| Cow position: | chr26:6299043-6299176 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 62-198 |
| Cow position: | chr26:18719162-18719298 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-410 |
| Cow position: | chr26:24183041-24182913 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.