Cow genome map
Conread name: | rova040_k2.y1 |
Conread position: | 1-138 |
Cow position: | chr27:16580753-16580611 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1-147 |
Cow position: | chr27:21138953-21138803 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 18, 42 |
Conread position: | 1-147 |
Cow position: | chr27:30677040-30676890 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-149 |
Cow position: | chr27:30561043-30560892 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 63, 90 |
Conread position: | 1-153 |
Cow position: | chr27:4673151-4672994 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 26, 151 |
Conread position: | 1-153 |
Cow position: | chr27:20592114-20591957 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 58, 143 |
Conread position: | 1-157 |
Cow position: | chr27:12231778-12231940 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 23, 84 |
Conread position: | 1-159 |
Cow position: | chr27:6037253-6037092 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 64, 37 |
Conread position: | 1-167 |
Cow position: | chr27:491018-490858 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1-178 |
Cow position: | chr27:19647811-19647990 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 141 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 80, 9 |
Conread position: | 1-179 |
Cow position: | chr27:23600395-23600218 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 141 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 66, 34 |
Conread position: | 1-182 |
Cow position: | chr27:12424796-12424972 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 63, 36 |
Conread position: | 1-184 |
Cow position: | chr27:12244005-12244179 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 171, 40 |
Conread position: | 1-186 |
Cow position: | chr27:13005965-13005788 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 70, 9 |
Conread position: | 1-186 |
Cow position: | chr27:19577805-19577615 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 47, 65 |
Conread position: | 1-187 |
Cow position: | chr27:21181966-21181784 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 134, 37 |
Conread position: | 1-187 |
Cow position: | chr27:26935789-26935967 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 160, 64 |
Conread position: | 1-190 |
Cow position: | chr27:19601507-19601319 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 154 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 59, 86 |
Conread position: | 1-195 |
Cow position: | chr27:16493702-16493516 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 150 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 41, 90 |
Conread position: | 1-198 |
Cow position: | chr27:17472943-17472741 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 60, 153 |
Conread position: | 1-198 |
Cow position: | chr27:23891068-23890871 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 144 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 65, 19 |
Conread position: | 1-198 |
Cow position: | chr27:29038814-29039008 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1-201 |
Cow position: | chr27:15319581-15319386 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 16, 99 |
Conread position: | 1-203 |
Cow position: | chr27:9169514-9169718 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 143 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 67, 145 |
Conread position: | 1-212 |
Cow position: | chr27:24224777-24224978 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 160 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 162, 34 |
Conread position: | 1-215 |
Cow position: | chr27:27234156-27233936 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 21, 168 |
Conread position: | 1-218 |
Cow position: | chr27:6160114-6159895 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 12, 43 |
Conread position: | 2-157 |
Cow position: | chr27:19637772-19637613 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 20, 93 |
Conread position: | 2-184 |
Cow position: | chr27:13875864-13875675 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 21, 144 |
Conread position: | 2-253 |
Cow position: | chr27:2592676-2592424 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 178 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 71, 31 |
Conread position: | 3-188 |
Cow position: | chr27:4664598-4664421 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 142 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 4-178 |
Cow position: | chr27:794911-794739 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 123 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 151, 72 |
Conread position: | 4-179 |
Cow position: | chr27:6620269-6620092 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 4-179 |
Cow position: | chr27:22330541-22330721 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 60, 145 |
Conread position: | 4-193 |
Cow position: | chr27:4011806-4011616 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 54, 137 |
Conread position: | 4-232 |
Cow position: | chr27:28921773-28921991 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 160 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 73, 25 |
Conread position: | 6-185 |
Cow position: | chr27:3934563-3934739 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 83, 63 |
Conread position: | 6-196 |
Cow position: | chr27:27049786-27049976 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-198 |
Cow position: | chr27:11416573-11416381 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 161 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 143 |
Conread position: | 8-161 |
Cow position: | chr27:23659213-23659369 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 55, 124 |
Conread position: | 8-214 |
Cow position: | chr27:14937301-14937511 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 169 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 55, 200 |
Conread position: | 12-149 |
Cow position: | chr27:14874758-14874618 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 117 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 50, 129 |
Conread position: | 12-188 |
Cow position: | chr27:26440941-26441113 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 139 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 58, 128 |
Conread position: | 12-196 |
Cow position: | chr27:29679207-29679392 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 57, 86 |
Conread position: | 13-133 |
Cow position: | chr27:6038715-6038591 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 13-133 |
Cow position: | chr27:29019634-29019757 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 104 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 13-141 |
Cow position: | chr27:18948476-18948610 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 112 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 13-147 |
Cow position: | chr27:465076-464938 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 13-185 |
Cow position: | chr27:22418650-22418824 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 36 |
Conread position: | 13-192 |
Cow position: | chr27:22268619-22268440 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 130 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 136 |
Conread position: | 13-198 |
Cow position: | chr27:26492586-26492769 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 49, 40 |
Conread position: | 13-210 |
Cow position: | chr27:8430326-8430519 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 152 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 189, 25 |
Conread position: | 13-212 |
Cow position: | chr27:27053411-27053215 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 141 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 13-213 |
Cow position: | chr27:6454329-6454128 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 156 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 50, 140 |
Conread position: | 13-213 |
Cow position: | chr27:25998819-25998622 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 152 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 58, 119 |
Conread position: | 13-214 |
Cow position: | chr27:25471254-25471058 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 13-233 |
Cow position: | chr27:23472370-23472159 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 13-259 |
Cow position: | chr27:17397332-17397579 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 172 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 55, 127 |
Conread position: | 14-140 |
Cow position: | chr27:10086567-10086695 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 49, 81 |
Conread position: | 14-198 |
Cow position: | chr27:8048623-8048807 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 50, 81 |
Conread position: | 17-198 |
Cow position: | chr27:20765847-20766027 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 60, 84 |
Conread position: | 23-193 |
Cow position: | chr27:9691944-9692112 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 131 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 39, 88 |
Conread position: | 39-211 |
Cow position: | chr27:21681244-21681406 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 159, 26 |
Conread position: | 39-215 |
Cow position: | chr27:24509909-24509737 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 24, 100 |
Conread position: | 43-213 |
Cow position: | chr27:30365400-30365238 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 21, 63 |
Conread position: | 47-198 |
Cow position: | chr27:11356458-11356609 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 51-198 |
Cow position: | chr27:783775-783632 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 57-198 |
Cow position: | chr27:18060351-18060218 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 58-163 |
Cow position: | chr27:1084929-1085037 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 60-198 |
Cow position: | chr27:19083645-19083783 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 9, 87 |
Conread position: | 88-207 |
Cow position: | chr27:19869869-19869752 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 309-410 |
Cow position: | chr27:14937491-14937592 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 69, 93 |
Conread position: | 319-410 |
Cow position: | chr27:18219326-18219234 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 79 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.