Cow genome map

Conread name: rova040_k2.y1

Conread position: 1-132
Cow position: chr29:36404646-36404781 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-140
Cow position: chr29:40337702-40337562 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 56

Conread position: 1-141
Cow position: chr29:34736641-34736500 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 16

Conread position: 1-153
Cow position: chr29:10153965-10153808 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1-175
Cow position: chr29:39023513-39023349 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 24

Conread position: 1-178
Cow position: chr29:23743215-23743053 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 1-179
Cow position: chr29:18021855-18021675 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 94

Conread position: 1-187
Cow position: chr29:2984709-2984901 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 149

Conread position: 1-188
Cow position: chr29:15940812-15940619 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 61

Conread position: 1-188
Cow position: chr29:17543275-17543455 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 97

Conread position: 1-188
Cow position: chr29:30812575-30812763 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 79

Conread position: 1-193
Cow position: chr29:26734858-26735045 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 11

Conread position: 1-197
Cow position: chr29:34699991-34699812 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 1-198
Cow position: chr29:356151-356342 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 1-198
Cow position: chr29:3704379-3704177 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 111

Conread position: 1-198
Cow position: chr29:4367545-4367747 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 1-198
Cow position: chr29:4520160-4520361 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 1-198
Cow position: chr29:10187882-10188080 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 18, 58

Conread position: 1-198
Cow position: chr29:11366070-11366260 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 34

Conread position: 1-198
Cow position: chr29:29057005-29057200 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 90

Conread position: 1-203
Cow position: chr29:463829-463628 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 89

Conread position: 1-203
Cow position: chr29:13553957-13554167 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 1-208
Cow position: chr29:17339472-17339272 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 1-210
Cow position: chr29:31926466-31926258 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 150

Conread position: 1-212
Cow position: chr29:1956264-1956058 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 103

Conread position: 1-214
Cow position: chr29:32644748-32644947 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 43

Conread position: 1-218
Cow position: chr29:18695082-18695292 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 108

Conread position: 1-231
Cow position: chr29:22162426-22162197 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 16

Conread position: 2-132
Cow position: chr29:21925035-21925169 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 2-218
Cow position: chr29:19907181-19907396 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 90

Conread position: 2-219
Cow position: chr29:7663438-7663228 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 18

Conread position: 2-228
Cow position: chr29:35442636-35442413 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 129

Conread position: 2-232
Cow position: chr29:41530675-41530903 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 55

Conread position: 3-212
Cow position: chr29:37961151-37960941 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 61, 102

Conread position: 4-140
Cow position: chr29:11071872-11071731 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 4-142
Cow position: chr29:7408057-7407919 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 89

Conread position: 4-151
Cow position: chr29:5964593-5964442 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 99

Conread position: 4-184
Cow position: chr29:603488-603311 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 105

Conread position: 4-188
Cow position: chr29:18338714-18338529 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 136

Conread position: 4-198
Cow position: chr29:11634653-11634843 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 63

Conread position: 4-198
Cow position: chr29:11787624-11787821 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 60, 92

Conread position: 4-198
Cow position: chr29:22895554-22895748 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 115, 66

Conread position: 4-214
Cow position: chr29:650106-650314 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 66, 128

Conread position: 4-225
Cow position: chr29:6293648-6293432 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 132

Conread position: 6-198
Cow position: chr29:12025640-12025446 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 14

Conread position: 7-203
Cow position: chr29:35291921-35292118 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 8-143
Cow position: chr29:38992985-38992847 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 21

Conread position: 8-187
Cow position: chr29:19508787-19508964 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 138, 0

Conread position: 8-205
Cow position: chr29:19897440-19897639 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 33

Conread position: 13-135
Cow position: chr29:27285632-27285751 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 13-151
Cow position: chr29:25091949-25092088 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 108

Conread position: 13-154
Cow position: chr29:709284-709139 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 13-171
Cow position: chr29:7392936-7393097 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 137

Conread position: 13-188
Cow position: chr29:477943-478119 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 101

Conread position: 13-195
Cow position: chr29:9912009-9912194 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 140

Conread position: 13-196
Cow position: chr29:23984122-23983936 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 135

Conread position: 13-198
Cow position: chr29:12451211-12451401 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 139

Conread position: 13-198
Cow position: chr29:18072770-18072965 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 113

Conread position: 13-203
Cow position: chr29:12901272-12901078 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 139

Conread position: 13-203
Cow position: chr29:29302815-29302632 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 101

Conread position: 13-212
Cow position: chr29:38580816-38581013 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 37

Conread position: 13-232
Cow position: chr29:5186658-5186440 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 56

Conread position: 13-235
Cow position: chr29:22778341-22778121 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 138

Conread position: 13-244
Cow position: chr29:21534839-21534607 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 39

Conread position: 13-247
Cow position: chr29:87181-86944 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 132

Conread position: 13-251
Cow position: chr29:32655584-32655358 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 14-214
Cow position: chr29:13634459-13634262 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 17-140
Cow position: chr29:44135619-44135493 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 17-187
Cow position: chr29:26986773-26986940 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 104

Conread position: 17-188
Cow position: chr29:45383966-45384138 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 132

Conread position: 17-197
Cow position: chr29:13639529-13639347 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 107

Conread position: 17-198
Cow position: chr29:16055294-16055106 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 140

Conread position: 17-198
Cow position: chr29:26129342-26129520 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 93

Conread position: 17-218
Cow position: chr29:26317695-26317892 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 93

Conread position: 17-218
Cow position: chr29:29559879-29559680 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 103

Conread position: 18-214
Cow position: chr29:25924126-25923925 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 191

Conread position: 18-225
Cow position: chr29:18963585-18963781 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 31

Conread position: 24-198
Cow position: chr29:26298833-26298996 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 38-152
Cow position: chr29:24197780-24197666 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 39-211
Cow position: chr29:290107-289939 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 31

Conread position: 39-214
Cow position: chr29:6771995-6772168 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 60

Conread position: 40-197
Cow position: chr29:18540926-18541081 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 24

Conread position: 40-210
Cow position: chr29:11005592-11005770 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 50-198
Cow position: chr29:23233326-23233474 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 94

Conread position: 52-198
Cow position: chr29:14758987-14758837 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 60-197
Cow position: chr29:942515-942651 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 87

Conread position: 62-198
Cow position: chr29:7054309-7054441 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 70-218
Cow position: chr29:1340679-1340823 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 45

Show alignments to all cow chromosomes.