Cow genome map

Conread name: rova040_k2.y1

Conread position: 1-127
Cow position: chr4:25359427-25359558 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-139
Cow position: chr4:47444946-47444809 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 67

Conread position: 1-141
Cow position: chr4:25879214-25879360 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-145
Cow position: chr4:7213766-7213616 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 52

Conread position: 1-145
Cow position: chr4:59833755-59833909 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 147

Conread position: 1-147
Cow position: chr4:8650059-8650202 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 104

Conread position: 1-147
Cow position: chr4:25906505-25906360 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 19

Conread position: 1-147
Cow position: chr4:59719452-59719603 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 1-158
Cow position: chr4:54501630-54501468 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 95

Conread position: 1-161
Cow position: chr4:9547797-9547953 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 20

Conread position: 1-165
Cow position: chr4:53763299-53763136 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 131, 82

Conread position: 1-175
Cow position: chr4:21391994-21391818 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 148

Conread position: 1-185
Cow position: chr4:21259035-21259222 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 1-185
Cow position: chr4:36755569-36755747 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 29

Conread position: 1-186
Cow position: chr4:9681116-9681309 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 1-186
Cow position: chr4:16339774-16339596 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 169, 56

Conread position: 1-186
Cow position: chr4:31634745-31634563 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 1-188
Cow position: chr4:21517186-21516997 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 28

Conread position: 1-188
Cow position: chr4:27687742-27687933 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 1-188
Cow position: chr4:29291338-29291522 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 133

Conread position: 1-188
Cow position: chr4:51122875-51123065 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 104

Conread position: 1-192
Cow position: chr4:46083074-46082879 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 97

Conread position: 1-196
Cow position: chr4:16593902-16594098 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 64

Conread position: 1-198
Cow position: chr4:2610054-2610246 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 1-198
Cow position: chr4:3440225-3440416 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 56

Conread position: 1-198
Cow position: chr4:5999374-5999174 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 83

Conread position: 1-198
Cow position: chr4:15904917-15905116 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 55

Conread position: 1-198
Cow position: chr4:21365224-21365425 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 82, 0

Conread position: 1-198
Cow position: chr4:22115425-22115625 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 66, 140

Conread position: 1-198
Cow position: chr4:22249627-22249429 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 32, 82

Conread position: 1-198
Cow position: chr4:22528569-22528367 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 1-198
Cow position: chr4:27561215-27561413 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 141

Conread position: 1-198
Cow position: chr4:28377831-28377643 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1-198
Cow position: chr4:40623277-40623081 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 99, 91

Conread position: 1-198
Cow position: chr4:52225828-52226021 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 67

Conread position: 1-198
Cow position: chr4:52748639-52748438 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 140

Conread position: 1-198
Cow position: chr4:54146656-54146446 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 51

Conread position: 1-203
Cow position: chr4:23509407-23509617 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 155

Conread position: 1-205
Cow position: chr4:58858344-58858145 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 25

Conread position: 1-206
Cow position: chr4:36945373-36945168 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 162, 64

Conread position: 1-210
Cow position: chr4:59785136-59785348 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 124

Conread position: 1-211
Cow position: chr4:39128350-39128571 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-211
Cow position: chr4:45114787-45114578 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 141

Conread position: 1-212
Cow position: chr4:35870034-35870233 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 1-212
Cow position: chr4:40823296-40823085 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 104

Conread position: 1-213
Cow position: chr4:21073331-21073123 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 14

Conread position: 1-214
Cow position: chr4:5797791-5797996 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 60, 102

Conread position: 1-214
Cow position: chr4:12697466-12697668 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-214
Cow position: chr4:23494750-23494951 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 1-214
Cow position: chr4:25972716-25972930 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 155

Conread position: 1-214
Cow position: chr4:50769949-50769737 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 18, 97

Conread position: 1-218
Cow position: chr4:14550669-14550874 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-218
Cow position: chr4:38181501-38181722 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 189, 0

Conread position: 1-218
Cow position: chr4:68795487-68795259 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 176

Conread position: 1-219
Cow position: chr4:36813191-36813413 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 110

Conread position: 1-223
Cow position: chr4:51768931-51769145 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 66, 136

Conread position: 1-224
Cow position: chr4:23445234-23445006 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 213

Conread position: 1-224
Cow position: chr4:37935462-37935245 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 29

Conread position: 1-226
Cow position: chr4:41602667-41602894 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 102

Conread position: 1-231
Cow position: chr4:38935177-38935406 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 16

Conread position: 1-232
Cow position: chr4:10378929-10379158 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 16

Conread position: 1-232
Cow position: chr4:15623662-15623898 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 109

Conread position: 1-252
Cow position: chr4:34369634-34369383 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 125

Conread position: 1-254
Cow position: chr4:51784000-51784247 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 25

Conread position: 1-275
Cow position: chr4:35940193-35939916 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 148

Conread position: 2-129
Cow position: chr4:6133791-6133922 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 2-144
Cow position: chr4:46552500-46552354 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 3-214
Cow position: chr4:62618339-62618547 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 124

Conread position: 3-232
Cow position: chr4:45367554-45367787 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 205

Conread position: 4-150
Cow position: chr4:61271808-61271661 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 46

Conread position: 4-159
Cow position: chr4:65168183-65168025 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 4-163
Cow position: chr4:65116387-65116218 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 4-186
Cow position: chr4:36893179-36893363 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 124

Conread position: 4-187
Cow position: chr4:59565360-59565548 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 136

Conread position: 4-188
Cow position: chr4:6792258-6792444 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 100

Conread position: 4-188
Cow position: chr4:61171729-61171911 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 70

Conread position: 4-192
Cow position: chr4:48137735-48137922 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 26

Conread position: 4-198
Cow position: chr4:15784987-15784791 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 134

Conread position: 4-210
Cow position: chr4:62411699-62411910 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 141

Conread position: 4-211
Cow position: chr4:5623376-5623174 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 111

Conread position: 4-214
Cow position: chr4:44665541-44665342 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 54

Conread position: 4-225
Cow position: chr4:56570630-56570850 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 31

Conread position: 5-158
Cow position: chr4:68634786-68634938 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 105

Conread position: 5-189
Cow position: chr4:65841939-65841758 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 5-225
Cow position: chr4:25889007-25888788 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 142

Conread position: 8-142
Cow position: chr4:14159302-14159163 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 8-188
Cow position: chr4:33395868-33395692 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 75

Conread position: 8-191
Cow position: chr4:47773811-47773630 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 63

Conread position: 8-198
Cow position: chr4:6208290-6208477 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 25

Conread position: 8-212
Cow position: chr4:13406537-13406737 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 7

Conread position: 8-225
Cow position: chr4:66547941-66547724 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 87

Conread position: 8-232
Cow position: chr4:19322257-19322030 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 144

Conread position: 8-232
Cow position: chr4:47348653-47348874 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 138

Conread position: 9-198
Cow position: chr4:9845744-9845934 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 30

Conread position: 9-218
Cow position: chr4:44496207-44496407 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 10-210
Cow position: chr4:1374202-1374388 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 11-198
Cow position: chr4:30671576-30671394 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 54

Conread position: 12-194
Cow position: chr4:65406528-65406353 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 80

Conread position: 12-232
Cow position: chr4:44782203-44782422 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 140

Conread position: 13-133
Cow position: chr4:26541569-26541694 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 13-142
Cow position: chr4:5553958-5553824 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 13-147
Cow position: chr4:48499670-48499805 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 91

Conread position: 13-156
Cow position: chr4:46861763-46861619 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 21

Conread position: 13-185
Cow position: chr4:23758635-23758811 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 13-185
Cow position: chr4:36075926-36075759 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 45

Conread position: 13-186
Cow position: chr4:49001466-49001289 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 141

Conread position: 13-189
Cow position: chr4:3837114-3837281 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 13-198
Cow position: chr4:243060-243247 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 19

Conread position: 13-198
Cow position: chr4:10992368-10992181 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 69

Conread position: 13-198
Cow position: chr4:19307090-19307277 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 130

Conread position: 13-198
Cow position: chr4:20299105-20299291 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 39

Conread position: 13-198
Cow position: chr4:24187783-24187595 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 95

Conread position: 13-198
Cow position: chr4:27372024-27371843 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 109, 51

Conread position: 13-198
Cow position: chr4:27997518-27997703 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 120, 51

Conread position: 13-198
Cow position: chr4:36929148-36929332 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 126

Conread position: 13-198
Cow position: chr4:39767180-39767370 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 13-198
Cow position: chr4:41154475-41154664 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 13-198
Cow position: chr4:45918867-45919054 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 78

Conread position: 13-200
Cow position: chr4:33612528-33612341 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 121

Conread position: 13-203
Cow position: chr4:18439738-18439544 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 19

Conread position: 13-207
Cow position: chr4:9912563-9912755 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 137

Conread position: 13-212
Cow position: chr4:58834571-58834375 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 167, 69

Conread position: 13-215
Cow position: chr4:32726057-32726255 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 120

Conread position: 13-224
Cow position: chr4:31506201-31505984 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 171

Conread position: 13-229
Cow position: chr4:3475462-3475678 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 36

Conread position: 14-179
Cow position: chr4:66125252-66125410 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 29

Conread position: 14-188
Cow position: chr4:51408137-51407964 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 137, 65

Conread position: 14-191
Cow position: chr4:10837548-10837371 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 108, 44

Conread position: 14-198
Cow position: chr4:33030384-33030568 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 14-207
Cow position: chr4:31172506-31172700 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 49, 157

Conread position: 15-174
Cow position: chr4:11099836-11099675 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 124

Conread position: 17-149
Cow position: chr4:24415124-24415256 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 93

Conread position: 17-186
Cow position: chr4:63418089-63417918 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 120

Conread position: 17-198
Cow position: chr4:58512729-58512545 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 126

Conread position: 17-253
Cow position: chr4:19501249-19501025 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 17-261
Cow position: chr4:509068-508834 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 72

Conread position: 18-176
Cow position: chr4:11671291-11671446 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 46

Conread position: 18-198
Cow position: chr4:63784286-63784104 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 125

Conread position: 18-212
Cow position: chr4:37828007-37827821 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 19-186
Cow position: chr4:9649837-9650008 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 19-188
Cow position: chr4:22860875-22860703 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 64

Conread position: 19-198
Cow position: chr4:23166741-23166924 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 50, 79

Conread position: 22-235
Cow position: chr4:51605768-51605563 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 26-209
Cow position: chr4:14152932-14153123 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 121

Conread position: 27-207
Cow position: chr4:30131190-30131363 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 96

Conread position: 39-134
Cow position: chr4:24497960-24497862 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 39-184
Cow position: chr4:45116204-45116055 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 58

Conread position: 39-203
Cow position: chr4:28399561-28399396 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 55

Conread position: 39-218
Cow position: chr4:37880789-37880969 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 166

Conread position: 46-182
Cow position: chr4:23311394-23311253 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 116

Conread position: 48-216
Cow position: chr4:5913483-5913314 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 102

Conread position: 51-208
Cow position: chr4:33667073-33667224 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 56-210
Cow position: chr4:6166429-6166273 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 57-185
Cow position: chr4:30759-30631 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 109

Conread position: 59-168
Cow position: chr4:28094053-28093944 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 11

Conread position: 60-214
Cow position: chr4:5580436-5580588 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 87

Conread position: 60-214
Cow position: chr4:21250146-21250002 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 69-198
Cow position: chr4:48283391-48283261 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 71-228
Cow position: chr4:40434012-40433858 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 81-198
Cow position: chr4:19729197-19729083 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 88-198
Cow position: chr4:22713800-22713690 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 91-198
Cow position: chr4:5002675-5002781 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 319-409
Cow position: chr4:31172693-31172783 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 40

Show alignments to all cow chromosomes.