Cow genome map
| Conread name: | rova040_k2.y1 |
| Conread position: | 1-137 |
| Cow position: | chr6:1890980-1890838 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-141 |
| Cow position: | chr6:67436854-67436998 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 1-142 |
| Cow position: | chr6:44098950-44099098 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 129 |
| Conread position: | 1-149 |
| Cow position: | chr6:47540397-47540548 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 1-154 |
| Cow position: | chr6:37739052-37739213 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-167 |
| Cow position: | chr6:52401726-52401895 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 1-173 |
| Cow position: | chr6:33851925-33851756 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-186 |
| Cow position: | chr6:2582740-2582925 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 160, 150 |
| Conread position: | 1-187 |
| Cow position: | chr6:24223294-24223102 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 46, 152 |
| Conread position: | 1-188 |
| Cow position: | chr6:6367796-6367613 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-188 |
| Cow position: | chr6:34549277-34549455 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-189 |
| Cow position: | chr6:25773515-25773331 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 1-191 |
| Cow position: | chr6:56041756-56041567 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 1-196 |
| Cow position: | chr6:19427315-19427516 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 187 |
| Conread position: | 1-197 |
| Cow position: | chr6:36652285-36652484 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 1-198 |
| Cow position: | chr6:8318298-8318097 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-198 |
| Cow position: | chr6:9026383-9026587 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 63, 152 |
| Conread position: | 1-198 |
| Cow position: | chr6:12387458-12387264 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 1-198 |
| Cow position: | chr6:28084149-28083952 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 1-198 |
| Cow position: | chr6:47327201-47327005 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 1-198 |
| Cow position: | chr6:50318190-50317977 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 1-198 |
| Cow position: | chr6:54365462-54365265 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 1-198 |
| Cow position: | chr6:58315912-58316112 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 162 |
| Conread position: | 1-203 |
| Cow position: | chr6:7190253-7190051 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 1-203 |
| Cow position: | chr6:12543067-12542862 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 76, 161 |
| Conread position: | 1-210 |
| Cow position: | chr6:42566727-42566929 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-212 |
| Cow position: | chr6:12652072-12652283 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 1-212 |
| Cow position: | chr6:35435870-35436069 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 1-214 |
| Cow position: | chr6:33984833-33985056 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 68, 162 |
| Conread position: | 1-214 |
| Cow position: | chr6:55892628-55892845 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 1-214 |
| Cow position: | chr6:65871763-65871967 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 1-215 |
| Cow position: | chr6:32276796-32277024 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 1-215 |
| Cow position: | chr6:52556608-52556402 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 61, 129 |
| Conread position: | 1-218 |
| Cow position: | chr6:17534655-17534432 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 136 |
| Conread position: | 1-218 |
| Cow position: | chr6:42617746-42617966 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 1-218 |
| Cow position: | chr6:53673729-53673945 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 1-218 |
| Cow position: | chr6:56376484-56376267 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 1-219 |
| Cow position: | chr6:29077595-29077817 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 195 |
| Conread position: | 1-225 |
| Cow position: | chr6:57164292-57164520 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 1-232 |
| Cow position: | chr6:32121777-32122002 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 160, 86 |
| Conread position: | 1-232 |
| Cow position: | chr6:43135078-43134844 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 139 |
| Conread position: | 1-232 |
| Cow position: | chr6:55475112-55475350 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 155 |
| Conread position: | 1-236 |
| Cow position: | chr6:47026347-47026577 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 233, 131 |
| Conread position: | 1-236 |
| Cow position: | chr6:48573013-48572780 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 166, 53 |
| Conread position: | 2-129 |
| Cow position: | chr6:52705850-52705725 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 2-192 |
| Cow position: | chr6:4079516-4079335 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 2-209 |
| Cow position: | chr6:16625814-16626017 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 2-211 |
| Cow position: | chr6:44372076-44371871 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 2-231 |
| Cow position: | chr6:35415655-35415421 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 207 |
| Conread position: | 2-232 |
| Cow position: | chr6:38609835-38610063 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 140 |
| Conread position: | 3-137 |
| Cow position: | chr6:65852675-65852541 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-187 |
| Cow position: | chr6:6596448-6596628 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 112 |
| Conread position: | 4-129 |
| Cow position: | chr6:39994588-39994464 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 4-164 |
| Cow position: | chr6:4022972-4023127 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 4-165 |
| Cow position: | chr6:60152905-60153068 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 146 |
| Conread position: | 4-187 |
| Cow position: | chr6:14658478-14658654 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-187 |
| Cow position: | chr6:45793763-45793940 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 4-188 |
| Cow position: | chr6:17090468-17090653 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 153 |
| Conread position: | 4-188 |
| Cow position: | chr6:47204342-47204533 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-191 |
| Cow position: | chr6:18582941-18582751 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-198 |
| Cow position: | chr6:38614688-38614882 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 4-198 |
| Cow position: | chr6:52002237-52002423 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 4-198 |
| Cow position: | chr6:67950823-67951018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 4-211 |
| Cow position: | chr6:11169574-11169776 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 130, 65 |
| Conread position: | 4-220 |
| Cow position: | chr6:45065146-45064933 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 4-225 |
| Cow position: | chr6:16423572-16423790 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 4-225 |
| Cow position: | chr6:45596669-45596441 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-232 |
| Cow position: | chr6:47616740-47616514 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 144 |
| Conread position: | 4-233 |
| Cow position: | chr6:21737015-21736791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 4-253 |
| Cow position: | chr6:47574774-47575020 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 140 |
| Conread position: | 4-253 |
| Cow position: | chr6:54867385-54867631 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 4-261 |
| Cow position: | chr6:36470699-36470440 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 5-175 |
| Cow position: | chr6:38594497-38594335 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 5-192 |
| Cow position: | chr6:23986870-23986688 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 6-173 |
| Cow position: | chr6:48807125-48806955 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 7-164 |
| Cow position: | chr6:17669167-17669325 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 7-211 |
| Cow position: | chr6:10423042-10423243 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 7-213 |
| Cow position: | chr6:6995079-6994875 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 7-232 |
| Cow position: | chr6:32287512-32287734 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 8-157 |
| Cow position: | chr6:38895206-38895058 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 8-232 |
| Cow position: | chr6:46292469-46292253 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 8-253 |
| Cow position: | chr6:31635816-31635570 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 9-188 |
| Cow position: | chr6:66531944-66531768 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 12-196 |
| Cow position: | chr6:54144182-54144368 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 12-214 |
| Cow position: | chr6:15782644-15782437 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 13-134 |
| Cow position: | chr6:59249799-59249681 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 13-144 |
| Cow position: | chr6:40104613-40104749 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 13-147 |
| Cow position: | chr6:55842280-55842141 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 13-159 |
| Cow position: | chr6:61322488-61322639 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 13-176 |
| Cow position: | chr6:28811114-28810949 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 13-182 |
| Cow position: | chr6:1907422-1907591 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-183 |
| Cow position: | chr6:48344210-48344381 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 134 |
| Conread position: | 13-185 |
| Cow position: | chr6:6721982-6722155 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 140, 122 |
| Conread position: | 13-186 |
| Cow position: | chr6:28164676-28164852 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 13-187 |
| Cow position: | chr6:51840148-51840331 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-187 |
| Cow position: | chr6:54807105-54807279 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 115 |
| Conread position: | 13-188 |
| Cow position: | chr6:15447326-15447145 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 13-188 |
| Cow position: | chr6:60931016-60930845 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 13-189 |
| Cow position: | chr6:47625085-47624907 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 51, 112 |
| Conread position: | 13-191 |
| Cow position: | chr6:24649732-24649916 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 13-194 |
| Cow position: | chr6:56902746-56902923 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-196 |
| Cow position: | chr6:31425681-31425499 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 13-198 |
| Cow position: | chr6:30160201-30160386 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 13-198 |
| Cow position: | chr6:41265004-41265184 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 13-203 |
| Cow position: | chr6:32677202-32677014 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-211 |
| Cow position: | chr6:30315178-30314975 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 134 |
| Conread position: | 13-211 |
| Cow position: | chr6:65947206-65946999 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 144 |
| Conread position: | 13-213 |
| Cow position: | chr6:13592592-13592785 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 13-214 |
| Cow position: | chr6:3118316-3118116 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 13-214 |
| Cow position: | chr6:6943799-6943602 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 13-214 |
| Cow position: | chr6:24583352-24583144 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 198 |
| Conread position: | 13-214 |
| Cow position: | chr6:24623095-24622896 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 13-214 |
| Cow position: | chr6:36194469-36194676 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 13-216 |
| Cow position: | chr6:57686036-57686230 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 13-218 |
| Cow position: | chr6:58073926-58074129 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 13-224 |
| Cow position: | chr6:24962027-24962232 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 13-228 |
| Cow position: | chr6:63197290-63197072 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 13-232 |
| Cow position: | chr6:7173875-7173656 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 193 |
| Conread position: | 14-188 |
| Cow position: | chr6:30474206-30474376 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 153, 25 |
| Conread position: | 14-211 |
| Cow position: | chr6:3545574-3545769 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 140, 62 |
| Conread position: | 15-219 |
| Cow position: | chr6:38018148-38018344 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 7 |
| Conread position: | 17-176 |
| Cow position: | chr6:1510470-1510632 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 17-195 |
| Cow position: | chr6:16634336-16634161 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 47, 123 |
| Conread position: | 17-197 |
| Cow position: | chr6:10254125-10254303 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 17-198 |
| Cow position: | chr6:22968963-22969146 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 17-203 |
| Cow position: | chr6:59508241-59508425 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 17-213 |
| Cow position: | chr6:50034842-50034650 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 17-224 |
| Cow position: | chr6:15242718-15242923 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 18-190 |
| Cow position: | chr6:44511126-44511301 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 18-203 |
| Cow position: | chr6:58331771-58331956 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 18-214 |
| Cow position: | chr6:57119056-57118864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 19-176 |
| Cow position: | chr6:10237158-10236996 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 143 |
| Conread position: | 19-198 |
| Cow position: | chr6:7824648-7824829 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 25-236 |
| Cow position: | chr6:35775091-35774883 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 29-198 |
| Cow position: | chr6:38453874-38453707 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 29-214 |
| Cow position: | chr6:24545508-24545691 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 30-211 |
| Cow position: | chr6:15997319-15997139 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 173 |
| Conread position: | 32-192 |
| Cow position: | chr6:61218133-61217967 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 39-198 |
| Cow position: | chr6:4164265-4164103 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 39-198 |
| Cow position: | chr6:56860453-56860610 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 40-186 |
| Cow position: | chr6:41678994-41679137 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 42-209 |
| Cow position: | chr6:16675717-16675878 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 45-196 |
| Cow position: | chr6:59588497-59588342 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 51-198 |
| Cow position: | chr6:3078432-3078578 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 52-214 |
| Cow position: | chr6:32809198-32809349 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 60-187 |
| Cow position: | chr6:49800117-49800245 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 62-211 |
| Cow position: | chr6:40722-40576 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 62-214 |
| Cow position: | chr6:59633064-59633214 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 81, 90 |
| Conread position: | 65-198 |
| Cow position: | chr6:24557815-24557948 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-207 |
| Cow position: | chr6:9454229-9454362 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 72-232 |
| Cow position: | chr6:54479212-54479055 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 74-203 |
| Cow position: | chr6:7835858-7835987 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-198 |
| Cow position: | chr6:54062619-54062727 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 313-410 |
| Cow position: | chr6:54144364-54144462 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.