Cow genome map

Conread name: rova040_k2.y1

Conread position: 1-129
Cow position: chr9:8920201-8920069 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 125

Conread position: 1-133
Cow position: chr9:20839817-20839684 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 35

Conread position: 1-136
Cow position: chr9:30749382-30749522 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 83

Conread position: 1-138
Cow position: chr9:37069366-37069506 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 134

Conread position: 1-142
Cow position: chr9:46242061-46242209 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-144
Cow position: chr9:8546521-8546377 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 0

Conread position: 1-147
Cow position: chr9:11102612-11102761 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 51

Conread position: 1-147
Cow position: chr9:17806199-17806050 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 143

Conread position: 1-149
Cow position: chr9:31886212-31886365 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 137

Conread position: 1-153
Cow position: chr9:26556003-26556156 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 34

Conread position: 1-161
Cow position: chr9:2034374-2034217 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 75

Conread position: 1-162
Cow position: chr9:18093460-18093628 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 153

Conread position: 1-175
Cow position: chr9:48856533-48856370 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-186
Cow position: chr9:18110662-18110852 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 1-186
Cow position: chr9:34762647-34762833 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 100

Conread position: 1-187
Cow position: chr9:10980913-10981104 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 156

Conread position: 1-188
Cow position: chr9:5141283-5141088 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 1-188
Cow position: chr9:6225249-6225439 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 146

Conread position: 1-188
Cow position: chr9:23527593-23527774 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 34

Conread position: 1-188
Cow position: chr9:28726520-28726708 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 22

Conread position: 1-188
Cow position: chr9:41317764-41317957 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 1-188
Cow position: chr9:44408243-44408058 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 95

Conread position: 1-191
Cow position: chr9:11830212-11830025 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 53

Conread position: 1-197
Cow position: chr9:9957023-9956826 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 25

Conread position: 1-198
Cow position: chr9:15950956-15951151 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 106, 63

Conread position: 1-198
Cow position: chr9:20038944-20039129 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 35

Conread position: 1-198
Cow position: chr9:23042979-23042780 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 62, 51

Conread position: 1-198
Cow position: chr9:24399483-24399679 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 91

Conread position: 1-198
Cow position: chr9:25469235-25469052 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 1-198
Cow position: chr9:29108741-29108542 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 148

Conread position: 1-198
Cow position: chr9:29808667-29808459 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 1-198
Cow position: chr9:32848094-32847891 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 66, 152

Conread position: 1-198
Cow position: chr9:33093157-33092958 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 115

Conread position: 1-198
Cow position: chr9:38344097-38343893 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 151

Conread position: 1-198
Cow position: chr9:42998264-42998464 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 198

Conread position: 1-198
Cow position: chr9:47264015-47264212 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 64

Conread position: 1-198
Cow position: chr9:50295820-50296029 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-198
Cow position: chr9:51311872-51311675 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 168

Conread position: 1-198
Cow position: chr9:52787334-52787536 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 1-203
Cow position: chr9:8288820-8288616 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 76, 155

Conread position: 1-203
Cow position: chr9:10127465-10127672 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 153

Conread position: 1-206
Cow position: chr9:1952066-1952272 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 145

Conread position: 1-206
Cow position: chr9:42498032-42497826 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 142

Conread position: 1-207
Cow position: chr9:59924746-59924537 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 75

Conread position: 1-208
Cow position: chr9:38193203-38193007 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 147, 37

Conread position: 1-210
Cow position: chr9:21888372-21888162 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 141

Conread position: 1-210
Cow position: chr9:35850102-35849900 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 110

Conread position: 1-212
Cow position: chr9:54437464-54437258 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 1-214
Cow position: chr9:37099030-37099247 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 20

Conread position: 1-215
Cow position: chr9:30440400-30440616 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 77

Conread position: 1-217
Cow position: chr9:32816931-32817153 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 209

Conread position: 1-218
Cow position: chr9:14961152-14960935 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 140

Conread position: 1-218
Cow position: chr9:44552950-44552734 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 147

Conread position: 1-228
Cow position: chr9:9200522-9200746 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 102

Conread position: 1-231
Cow position: chr9:10666821-10667050 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 70

Conread position: 1-231
Cow position: chr9:36445826-36445595 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 74

Conread position: 1-232
Cow position: chr9:8534480-8534716 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 109

Conread position: 1-232
Cow position: chr9:28948055-28947836 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 109

Conread position: 1-232
Cow position: chr9:29184930-29185163 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 210

Conread position: 1-253
Cow position: chr9:7409985-7409718 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 61, 249

Conread position: 1-253
Cow position: chr9:9552290-9552045 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 57

Conread position: 2-154
Cow position: chr9:5319831-5319681 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 86, 0

Conread position: 2-177
Cow position: chr9:847717-847889 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 37

Conread position: 2-188
Cow position: chr9:12183954-12183763 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 101

Conread position: 2-188
Cow position: chr9:12356058-12355869 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 95

Conread position: 2-188
Cow position: chr9:55084095-55084288 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 2-190
Cow position: chr9:50667626-50667435 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 149

Conread position: 2-225
Cow position: chr9:27292082-27292298 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 13

Conread position: 2-229
Cow position: chr9:5029717-5029486 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 206

Conread position: 2-253
Cow position: chr9:49417189-49416942 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 132

Conread position: 3-198
Cow position: chr9:9315502-9315312 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 3-216
Cow position: chr9:2113807-2114017 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 106

Conread position: 4-156
Cow position: chr9:43814638-43814489 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 34

Conread position: 4-187
Cow position: chr9:8779038-8779224 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 135

Conread position: 4-188
Cow position: chr9:33038262-33038448 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 141

Conread position: 4-188
Cow position: chr9:34310230-34310040 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 165

Conread position: 4-197
Cow position: chr9:19637442-19637626 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 4-197
Cow position: chr9:21459958-21460147 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 156, 54

Conread position: 4-198
Cow position: chr9:48133929-48133735 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 169

Conread position: 4-198
Cow position: chr9:54206132-54206319 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 4-198
Cow position: chr9:54611035-54611230 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 120

Conread position: 4-198
Cow position: chr9:56861214-56861012 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 155

Conread position: 4-200
Cow position: chr9:59795083-59795285 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 153

Conread position: 4-206
Cow position: chr9:5763434-5763635 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 155

Conread position: 4-207
Cow position: chr9:34093229-34093442 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 182

Conread position: 4-209
Cow position: chr9:2597481-2597687 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 28

Conread position: 4-212
Cow position: chr9:3724861-3725070 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 134

Conread position: 4-213
Cow position: chr9:11870406-11870199 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 109, 47

Conread position: 4-224
Cow position: chr9:28354718-28354499 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 96

Conread position: 4-225
Cow position: chr9:214268-214480 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 60, 100

Conread position: 4-232
Cow position: chr9:46316588-46316808 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 13

Conread position: 5-198
Cow position: chr9:19382523-19382332 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 88

Conread position: 7-165
Cow position: chr9:23443756-23443594 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 97

Conread position: 7-165
Cow position: chr9:23450707-23450545 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 97

Conread position: 7-176
Cow position: chr9:47906083-47906253 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 101

Conread position: 7-197
Cow position: chr9:41679942-41679754 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 135

Conread position: 7-198
Cow position: chr9:3387888-3387695 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 133

Conread position: 7-198
Cow position: chr9:42037850-42037658 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 59

Conread position: 8-188
Cow position: chr9:27310565-27310739 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 8-203
Cow position: chr9:4858738-4858536 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 155

Conread position: 8-210
Cow position: chr9:50544433-50544636 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 33

Conread position: 8-254
Cow position: chr9:43871175-43870929 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 195

Conread position: 11-203
Cow position: chr9:9823314-9823505 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 5

Conread position: 12-174
Cow position: chr9:64453932-64454095 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 31

Conread position: 12-210
Cow position: chr9:3169332-3169531 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 87

Conread position: 13-131
Cow position: chr9:64007674-64007794 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 73

Conread position: 13-142
Cow position: chr9:46227063-46226928 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 13-152
Cow position: chr9:26828634-26828772 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 97

Conread position: 13-153
Cow position: chr9:30124111-30123970 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 102

Conread position: 13-171
Cow position: chr9:8600525-8600358 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 142

Conread position: 13-177
Cow position: chr9:27052146-27052314 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 13-180
Cow position: chr9:8612474-8612302 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 13-186
Cow position: chr9:5621843-5622020 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 138

Conread position: 13-186
Cow position: chr9:41958608-41958782 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 103

Conread position: 13-188
Cow position: chr9:3594339-3594518 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 84

Conread position: 13-188
Cow position: chr9:14853267-14853434 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 13-188
Cow position: chr9:16745867-16745688 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 13-188
Cow position: chr9:38546605-38546427 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 83

Conread position: 13-188
Cow position: chr9:52725029-52725201 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 159, 63

Conread position: 13-189
Cow position: chr9:11299500-11299675 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 126

Conread position: 13-191
Cow position: chr9:56253088-56252909 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 169

Conread position: 13-192
Cow position: chr9:30189287-30189107 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 156

Conread position: 13-198
Cow position: chr9:8951096-8950910 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 135

Conread position: 13-198
Cow position: chr9:15006564-15006748 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 92

Conread position: 13-198
Cow position: chr9:39152491-39152677 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 122, 0

Conread position: 13-203
Cow position: chr9:61997408-61997597 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 102

Conread position: 13-208
Cow position: chr9:14184862-14184659 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 199

Conread position: 13-208
Cow position: chr9:42901235-42901039 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 40

Conread position: 13-208
Cow position: chr9:52633304-52633498 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 136

Conread position: 13-212
Cow position: chr9:3932154-3931954 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 167
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 137

Conread position: 13-212
Cow position: chr9:3959247-3959060 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 13-214
Cow position: chr9:11201776-11201581 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 13-214
Cow position: chr9:44108640-44108842 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 36

Conread position: 13-218
Cow position: chr9:39428609-39428812 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 0

Conread position: 13-224
Cow position: chr9:17799818-17799608 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 25

Conread position: 13-231
Cow position: chr9:4861579-4861356 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 205

Conread position: 13-231
Cow position: chr9:24997333-24997544 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 65, 22

Conread position: 13-231
Cow position: chr9:43037670-43037457 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 67

Conread position: 13-232
Cow position: chr9:5433830-5433606 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 196

Conread position: 13-232
Cow position: chr9:7634463-7634245 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 14

Conread position: 13-247
Cow position: chr9:6338989-6338753 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 143

Conread position: 13-253
Cow position: chr9:34286991-34286754 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 81

Conread position: 15-161
Cow position: chr9:47108774-47108637 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 15-188
Cow position: chr9:47875768-47875945 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 17-191
Cow position: chr9:34106909-34106736 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 116

Conread position: 17-196
Cow position: chr9:11364078-11363899 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 17-200
Cow position: chr9:58669564-58669381 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 134

Conread position: 17-210
Cow position: chr9:22114444-22114643 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 13, 128

Conread position: 17-213
Cow position: chr9:15684605-15684795 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 17-232
Cow position: chr9:23943480-23943253 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 39

Conread position: 17-233
Cow position: chr9:5575506-5575293 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 55, 132

Conread position: 18-198
Cow position: chr9:8657252-8657425 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 46

Conread position: 19-187
Cow position: chr9:34468400-34468561 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 46

Conread position: 19-198
Cow position: chr9:41957988-41957808 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 79, 12

Conread position: 19-198
Cow position: chr9:54924807-54924624 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 19-214
Cow position: chr9:31587914-31588111 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 62, 188

Conread position: 19-227
Cow position: chr9:32625189-32624986 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 115

Conread position: 20-198
Cow position: chr9:44217944-44217774 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 81

Conread position: 28-198
Cow position: chr9:21462688-21462864 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 39-203
Cow position: chr9:55562659-55562501 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 39-214
Cow position: chr9:20897066-20896888 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 81

Conread position: 39-214
Cow position: chr9:24837695-24837529 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 82

Conread position: 44-218
Cow position: chr9:34725354-34725526 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 44

Conread position: 45-203
Cow position: chr9:33668884-33668730 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 126, 19

Conread position: 57-214
Cow position: chr9:34204273-34204121 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 58-198
Cow position: chr9:5172474-5172332 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 72, 31

Conread position: 60-214
Cow position: chr9:50004134-50003982 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 142, 0

Conread position: 61-198
Cow position: chr9:15034049-15033908 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 61

Conread position: 62-177
Cow position: chr9:9761307-9761195 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 319-410
Cow position: chr9:20839630-20839538 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 320-410
Cow position: chr9:34204130-34204039 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.