Non-Coding RNA Search

Cow genome map


           Conread name:
           rova040_k2.y1
        

               Conread position:
               1-129
               

               Cow position:
               chrX:12249656-12249784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 120
               

               Conread position:
               1-133
               

               Cow position:
               chrX:30005121-30005254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               1-141
               

               Cow position:
               chrX:25966893-25967031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               1-146
               

               Cow position:
               chrX:2383341-2383490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-154
               

               Cow position:
               chrX:160182-160023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-156
               

               Cow position:
               chrX:36693088-36693246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 146
               

               Conread position:
               1-157
               

               Cow position:
               chrX:33590580-33590737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               71, 138
               

               Conread position:
               1-173
               

               Cow position:
               chrX:8682079-8681899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-176
               

               Cow position:
               chrX:4482818-4482993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               1-181
               

               Cow position:
               chrX:34993992-34994163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-184
               

               Cow position:
               chrX:1503191-1503375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 101
               

               Conread position:
               1-184
               

               Cow position:
               chrX:24201039-24201219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 130
               

               Conread position:
               1-184
               

               Cow position:
               chrX:41743765-41743950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               1-185
               

               Cow position:
               chrX:20791965-20791778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-185
               

               Cow position:
               chrX:32820881-32821066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               1-186
               

               Cow position:
               chrX:5047051-5046860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               1-186
               

               Cow position:
               chrX:23666975-23667164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 171
               

               Conread position:
               1-186
               

               Cow position:
               chrX:44053111-44053298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 83
               

               Conread position:
               1-188
               

               Cow position:
               chrX:11674918-11675106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-188
               

               Cow position:
               chrX:28787210-28787393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               1-188
               

               Cow position:
               chrX:43647890-43647704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-188
               

               Cow position:
               chrX:47743932-47744132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               1-189
               

               Cow position:
               chrX:29055972-29056159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               1-189
               

               Cow position:
               chrX:29509591-29509397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               1-192
               

               Cow position:
               chrX:25193513-25193707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 101
               

               Conread position:
               1-193
               

               Cow position:
               chrX:10302191-10302385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               62, 96
               

               Conread position:
               1-195
               

               Cow position:
               chrX:9161440-9161628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               1-196
               

               Cow position:
               chrX:48248678-48248872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               1-197
               

               Cow position:
               chrX:27509167-27508973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               1-197
               

               Cow position:
               chrX:28836049-28835853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               81, 29
               

               Conread position:
               1-197
               

               Cow position:
               chrX:39546121-39545926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               1-198
               

               Cow position:
               chrX:157924-157722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               1-198
               

               Cow position:
               chrX:6563364-6563574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-198
               

               Cow position:
               chrX:8913772-8913973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               1-198
               

               Cow position:
               chrX:8915516-8915717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               1-198
               

               Cow position:
               chrX:16284094-16283895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               1-198
               

               Cow position:
               chrX:19930508-19930701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               1-198
               

               Cow position:
               chrX:26876030-26875831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 161
               

               Conread position:
               1-198
               

               Cow position:
               chrX:32743391-32743588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               1-198
               

               Cow position:
               chrX:38963959-38964158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               1-198
               

               Cow position:
               chrX:39415517-39415320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 150
               

               Conread position:
               1-205
               

               Cow position:
               chrX:42247331-42247125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               1-207
               

               Cow position:
               chrX:5017560-5017353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               1-211
               

               Cow position:
               chrX:46146708-46146500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               1-212
               

               Cow position:
               chrX:18287204-18287014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-212
               

               Cow position:
               chrX:24259729-24259519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 151
               

               Conread position:
               1-214
               

               Cow position:
               chrX:7497096-7497307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               78, 57
               

               Conread position:
               1-214
               

               Cow position:
               chrX:11313925-11313716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-214
               

               Cow position:
               chrX:17042543-17042747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               1-214
               

               Cow position:
               chrX:20376820-20377035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               1-214
               

               Cow position:
               chrX:21664873-21664656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 202
               

               Conread position:
               1-214
               

               Cow position:
               chrX:25571141-25570929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               56, 75
               

               Conread position:
               1-215
               

               Cow position:
               chrX:30162849-30163065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               71, 205
               

               Conread position:
               1-216
               

               Cow position:
               chrX:3147052-3147268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               10, 190
               

               Conread position:
               1-218
               

               Cow position:
               chrX:15329505-15329711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               1-229
               

               Cow position:
               chrX:25232443-25232670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 152
               

               Conread position:
               1-229
               

               Cow position:
               chrX:41167112-41166885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               1-231
               

               Cow position:
               chrX:17630950-17630722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 73
               

               Conread position:
               1-232
               

               Cow position:
               chrX:5638313-5638087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 138
               

               Conread position:
               1-232
               

               Cow position:
               chrX:27680254-27680480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-232
               

               Cow position:
               chrX:29542366-29542135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               76, 141
               

               Conread position:
               1-232
               

               Cow position:
               chrX:29680407-29680179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 143
               

               Conread position:
               1-232
               

               Cow position:
               chrX:34441599-34441372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 96
               

               Conread position:
               1-232
               

               Cow position:
               chrX:39558494-39558266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 34
               

               Conread position:
               1-253
               

               Cow position:
               chrX:7571759-7572006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               1-254
               

               Cow position:
               chrX:17725827-17726077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 160
               

               Conread position:
               2-187
               

               Cow position:
               chrX:7361997-7361825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               2-198
               

               Cow position:
               chrX:11856282-11856480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               2-206
               

               Cow position:
               chrX:23514161-23513957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 139
               

               Conread position:
               2-211
               

               Cow position:
               chrX:2786695-2786495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               2-218
               

               Cow position:
               chrX:28111360-28111578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 204
               

               Conread position:
               4-144
               

               Cow position:
               chrX:18216136-18216285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               4-159
               

               Cow position:
               chrX:31273099-31273260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-160
               

               Cow position:
               chrX:28580082-28580238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 141
               

               Conread position:
               4-170
               

               Cow position:
               chrX:35284474-35284649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               4-186
               

               Cow position:
               chrX:8917709-8917885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               145, 26
               

               Conread position:
               4-196
               

               Cow position:
               chrX:36961495-36961689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               54, 134
               

               Conread position:
               4-198
               

               Cow position:
               chrX:1499520-1499715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               4-201
               

               Cow position:
               chrX:10959541-10959342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 149
               

               Conread position:
               4-214
               

               Cow position:
               chrX:21593143-21593355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               4-218
               

               Cow position:
               chrX:17541823-17542028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-224
               

               Cow position:
               chrX:11589732-11589514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 138
               

               Conread position:
               4-228
               

               Cow position:
               chrX:23414505-23414290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               4-231
               

               Cow position:
               chrX:12826607-12826833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               157, 75
               

               Conread position:
               4-253
               

               Cow position:
               chrX:31311885-31312130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 98
               

               Conread position:
               5-215
               

               Cow position:
               chrX:35925820-35926022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               7-188
               

               Cow position:
               chrX:19878909-19879084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               7-201
               

               Cow position:
               chrX:26940637-26940451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               7-218
               

               Cow position:
               chrX:34565142-34565354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               7-232
               

               Cow position:
               chrX:28929699-28929924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 155
               

               Conread position:
               8-176
               

               Cow position:
               chrX:6234593-6234422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               58, 139
               

               Conread position:
               8-187
               

               Cow position:
               chrX:35632892-35632715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               8-188
               

               Cow position:
               chrX:41560383-41560217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               8-197
               

               Cow position:
               chrX:2300789-2300974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               8-198
               

               Cow position:
               chrX:27287875-27287682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               6, 99
               

               Conread position:
               11-210
               

               Cow position:
               chrX:27450136-27449934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               12-144
               

               Cow position:
               chrX:47178020-47178154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               12-225
               

               Cow position:
               chrX:10412121-10411908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               13-135
               

               Cow position:
               chrX:2029258-2029382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               13-153
               

               Cow position:
               chrX:6479866-6480006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               13-161
               

               Cow position:
               chrX:38188213-38188060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               13-175
               

               Cow position:
               chrX:2648486-2648323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               13-178
               

               Cow position:
               chrX:17271420-17271251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 88
               

               Conread position:
               13-178
               

               Cow position:
               chrX:25419293-25419124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               13-182
               

               Cow position:
               chrX:13323130-13322961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               13-186
               

               Cow position:
               chrX:1978380-1978552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               13-186
               

               Cow position:
               chrX:9227113-9226936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               13-186
               

               Cow position:
               chrX:37956233-37956396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               13-188
               

               Cow position:
               chrX:10831628-10831450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               64, 134
               

               Conread position:
               13-191
               

               Cow position:
               chrX:24747527-24747351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 65
               

               Conread position:
               13-195
               

               Cow position:
               chrX:38840755-38840931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               13-197
               

               Cow position:
               chrX:31340573-31340760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               50, 122
               

               Conread position:
               13-198
               

               Cow position:
               chrX:616397-616209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 150
               

               Conread position:
               13-198
               

               Cow position:
               chrX:619139-618952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               13-198
               

               Cow position:
               chrX:13785498-13785310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 135
               

               Conread position:
               13-198
               

               Cow position:
               chrX:16416375-16416559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               13-198
               

               Cow position:
               chrX:16514398-16514212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               13-198
               

               Cow position:
               chrX:18417724-18417540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               13-198
               

               Cow position:
               chrX:18456261-18456456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               13-198
               

               Cow position:
               chrX:29032277-29032465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               13-198
               

               Cow position:
               chrX:36840741-36840917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               13-199
               

               Cow position:
               chrX:42994481-42994664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 65
               

               Conread position:
               13-200
               

               Cow position:
               chrX:11562021-11562206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               13-203
               

               Cow position:
               chrX:11082749-11082567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               121, 75
               

               Conread position:
               13-203
               

               Cow position:
               chrX:32431492-32431679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               13-203
               

               Cow position:
               chrX:34401863-34402055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 133
               

               Conread position:
               13-203
               

               Cow position:
               chrX:40789073-40789267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               37, 64
               

               Conread position:
               13-205
               

               Cow position:
               chrX:1616179-1615984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               13-206
               

               Cow position:
               chrX:25713662-25713854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               142, 108
               

               Conread position:
               13-211
               

               Cow position:
               chrX:8517742-8517933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               13-212
               

               Cow position:
               chrX:25338048-25338250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 194
               

               Conread position:
               13-212
               

               Cow position:
               chrX:31260761-31260557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               13-212
               

               Cow position:
               chrX:32309974-32310167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 68
               

               Conread position:
               13-214
               

               Cow position:
               chrX:630441-630245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               13-214
               

               Cow position:
               chrX:11746709-11746907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 135
               

               Conread position:
               13-218
               

               Cow position:
               chrX:24132283-24132082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               13-224
               

               Cow position:
               chrX:38549317-38549521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               152, 65
               

               Conread position:
               13-226
               

               Cow position:
               chrX:20709940-20710153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 109
               

               Conread position:
               13-232
               

               Cow position:
               chrX:11717919-11717701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               129, 65
               

               Conread position:
               13-232
               

               Cow position:
               chrX:15814952-15815166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               13-253
               

               Cow position:
               chrX:29601964-29601727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               13-253
               

               Cow position:
               chrX:41027022-41027260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               14-156
               

               Cow position:
               chrX:17964653-17964503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               14-183
               

               Cow position:
               chrX:10373186-10373354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 65
               

               Conread position:
               14-198
               

               Cow position:
               chrX:39701096-39701274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               15-198
               

               Cow position:
               chrX:7425336-7425520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               16-198
               

               Cow position:
               chrX:33803141-33802953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               17-154
               

               Cow position:
               chrX:33827149-33827008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               17-170
               

               Cow position:
               chrX:488360-488517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               17-198
               

               Cow position:
               chrX:25388364-25388187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               17-198
               

               Cow position:
               chrX:41070806-41070987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               17-203
               

               Cow position:
               chrX:42011152-42011336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               17-232
               

               Cow position:
               chrX:3154375-3154160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               17-232
               

               Cow position:
               chrX:9365806-9365594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 109
               

               Conread position:
               17-232
               

               Cow position:
               chrX:21566271-21566489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 190
               

               Conread position:
               19-188
               

               Cow position:
               chrX:6041341-6041169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               19-188
               

               Cow position:
               chrX:13382200-13382371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               19-198
               

               Cow position:
               chrX:48246976-48246797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-212
               

               Cow position:
               chrX:29120917-29121109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 133
               

               Conread position:
               19-232
               

               Cow position:
               chrX:26493766-26493551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 187
               

               Conread position:
               22-212
               

               Cow position:
               chrX:40692877-40692689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               25-198
               

               Cow position:
               chrX:6656263-6656437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 65
               

               Conread position:
               29-198
               

               Cow position:
               chrX:40642866-40643041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               39-188
               

               Cow position:
               chrX:38654539-38654390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               39-219
               

               Cow position:
               chrX:18142564-18142384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               42-228
               

               Cow position:
               chrX:36010013-36009834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               43-214
               

               Cow position:
               chrX:27176417-27176248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               44-209
               

               Cow position:
               chrX:17635042-17635202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               49-212
               

               Cow position:
               chrX:25441090-25440936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               56-198
               

               Cow position:
               chrX:7344998-7345138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               56-198
               

               Cow position:
               chrX:19678355-19678217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               56-214
               

               Cow position:
               chrX:22326030-22326184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               57-207
               

               Cow position:
               chrX:17896038-17895890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               114, 93
               

               Conread position:
               59-198
               

               Cow position:
               chrX:27771662-27771522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               65-198
               

               Cow position:
               chrX:12725658-12725785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               66-198
               

               Cow position:
               chrX:9539244-9539377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               66-198
               

               Cow position:
               chrX:9839148-9839279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               74-198
               

               Cow position:
               chrX:38999784-38999906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               84-210
               

               Cow position:
               chrX:6633017-6633140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               88-198
               

               Cow position:
               chrX:30862256-30862366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-200
               

               Cow position:
               chrX:6682675-6682776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               295-410
               

               Cow position:
               chrX:18417274-18417158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               297-410
               

               Cow position:
               chrX:46028729-46028615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               316-413
               

               Cow position:
               chrX:630258-630160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-129
Cow position:	chrX:12249656-12249784 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	101
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	77, 120
Conread position:	1-133
Cow position:	chrX:30005121-30005254 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	114
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	63, 42
Conread position:	1-141
Cow position:	chrX:25966893-25967031 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	115
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	61, 9
Conread position:	1-146
Cow position:	chrX:2383341-2383490 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	118
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	31, 0
Conread position:	1-154
Cow position:	chrX:160182-160023 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	123
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	18, 0
Conread position:	1-156
Cow position:	chrX:36693088-36693246 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	124
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	62, 146
Conread position:	1-157
Cow position:	chrX:33590580-33590737 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	128
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	71, 138
Conread position:	1-173
Cow position:	chrX:8682079-8681899 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	142
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	15, 0
Conread position:	1-176
Cow position:	chrX:4482818-4482993 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	134
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	62, 125
Conread position:	1-181
Cow position:	chrX:34993992-34994163 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	136
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	24, 0
Conread position:	1-184
Cow position:	chrX:1503191-1503375 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	139
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	80, 101
Conread position:	1-185
Cow position:	chrX:20791965-20791778 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	136
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	63, 0
Conread position:	1-186
Cow position:	chrX:5047051-5046860 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	151
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	39, 54
Conread position:	1-188
Cow position:	chrX:11674918-11675106 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	131
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	76, 0
Conread position:	1-189
Cow position:	chrX:29055972-29056159 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	147
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	144, 0
Conread position:	1-192
Cow position:	chrX:25193513-25193707 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	144
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	63, 101
Conread position:	1-193
Cow position:	chrX:10302191-10302385 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	154
Alignm E-value:	5e-39
Alignm gaps (pig, cow):	62, 96
Conread position:	1-195
Cow position:	chrX:9161440-9161628 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	157
Alignm E-value:	5e-38
Alignm gaps (pig, cow):	66, 9
Conread position:	1-196
Cow position:	chrX:48248678-48248872 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	146
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	62, 111
Conread position:	1-197
Cow position:	chrX:27509167-27508973 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	142
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	78, 64