Cow genome map

Conread name: rpan12_m19.y1

Conread position: 34-185
Cow position: chr21:20044814-20044957 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 39-178
Cow position: chr21:34159915-34159779 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 39-187
Cow position: chr21:5153572-5153429 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 39-187
Cow position: chr21:13256760-13256616 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 39-187
Cow position: chr21:28919667-28919814 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 99, 0

Conread position: 39-187
Cow position: chr21:45473802-45473946 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 39-191
Cow position: chr21:18713238-18713092 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 40-185
Cow position: chr21:13035089-13035235 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 40-187
Cow position: chr21:33263803-33263660 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 58

Conread position: 40-187
Cow position: chr21:42145873-42145728 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 40-191
Cow position: chr21:33729387-33729241 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 41-187
Cow position: chr21:17643014-17643158 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 115

Conread position: 41-187
Cow position: chr21:24865113-24864967 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 41-188
Cow position: chr21:31159214-31159066 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 41-193
Cow position: chr21:41597772-41597621 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 0

Conread position: 42-176
Cow position: chr21:18790608-18790733 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 42-187
Cow position: chr21:1196823-1196679 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 42-187
Cow position: chr21:18718624-18718480 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 42-187
Cow position: chr21:19196211-19196356 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 42-187
Cow position: chr21:31253495-31253347 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 43-187
Cow position: chr21:41621075-41620931 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 124

Conread position: 44-187
Cow position: chr21:42913794-42913934 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 45-180
Cow position: chr21:9990465-9990333 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 45-187
Cow position: chr21:33350695-33350554 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 0

Conread position: 45-188
Cow position: chr21:9710756-9710893 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 46-192
Cow position: chr21:28443426-28443572 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 49-184
Cow position: chr21:30231753-30231888 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 281-495
Cow position: chr21:42047721-42047935 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 88

Conread position: 284-497
Cow position: chr21:15870002-15869795 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 54

Conread position: 289-497
Cow position: chr21:16797163-16796956 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 12

Conread position: 303-469
Cow position: chr21:11027062-11027227 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 303-497
Cow position: chr21:8545723-8545918 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 304-494
Cow position: chr21:38918497-38918306 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 304-497
Cow position: chr21:6154095-6153905 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 304-497
Cow position: chr21:11006472-11006666 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 141

Conread position: 305-465
Cow position: chr21:45835094-45835252 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 117

Conread position: 305-497
Cow position: chr21:38720545-38720355 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 85

Conread position: 307-495
Cow position: chr21:13656342-13656529 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 0

Conread position: 307-495
Cow position: chr21:30231402-30231587 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 154

Conread position: 308-497
Cow position: chr21:24757227-24757045 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 11

Conread position: 309-495
Cow position: chr21:26018673-26018486 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 165

Conread position: 309-496
Cow position: chr21:41140427-41140612 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 309-497
Cow position: chr21:27711944-27712138 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 165, 0

Conread position: 310-493
Cow position: chr21:10004592-10004777 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 310-497
Cow position: chr21:25345152-25344966 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 310-497
Cow position: chr21:49699748-49699935 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 311-495
Cow position: chr21:41437900-41437715 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 311-495
Cow position: chr21:48482241-48482423 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 92

Conread position: 311-497
Cow position: chr21:12322786-12322602 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 311-497
Cow position: chr21:15012722-15012544 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 60

Conread position: 311-497
Cow position: chr21:18568349-18568534 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 311-497
Cow position: chr21:34654357-34654178 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 312-495
Cow position: chr21:10656817-10656996 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 313-495
Cow position: chr21:13580699-13580520 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 313-497
Cow position: chr21:6292030-6291851 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 313-497
Cow position: chr21:27521054-27521234 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 5

Conread position: 313-497
Cow position: chr21:28882467-28882286 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 314-495
Cow position: chr21:44829472-44829652 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 314-497
Cow position: chr21:45537476-45537289 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 315-495
Cow position: chr21:1464626-1464450 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 18

Conread position: 315-497
Cow position: chr21:5214636-5214453 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 315-497
Cow position: chr21:42328377-42328560 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 131

Conread position: 316-489
Cow position: chr21:22718497-22718671 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 76

Conread position: 316-497
Cow position: chr21:3135583-3135764 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 25, 56

Conread position: 317-466
Cow position: chr21:41829096-41829245 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 317-466
Cow position: chr21:42227416-42227563 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 317-472
Cow position: chr21:47784875-47784722 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 317-475
Cow position: chr21:873921-873764 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 317-495
Cow position: chr21:30938384-30938559 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 53

Conread position: 317-496
Cow position: chr21:18450038-18449858 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 317-497
Cow position: chr21:938302-938124 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 318-466
Cow position: chr21:2904023-2904169 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 12

Conread position: 318-490
Cow position: chr21:41156151-41155982 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 318-495
Cow position: chr21:19083304-19083480 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 126

Conread position: 318-495
Cow position: chr21:23979898-23980075 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 318-497
Cow position: chr21:13134876-13134705 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 319-472
Cow position: chr21:34209736-34209886 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 319-489
Cow position: chr21:19339949-19340119 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 100

Conread position: 319-490
Cow position: chr21:31652667-31652496 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 319-490
Cow position: chr21:41738188-41738020 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 319-493
Cow position: chr21:29658554-29658385 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 127, 106

Conread position: 319-495
Cow position: chr21:9301505-9301330 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 319-495
Cow position: chr21:17403566-17403743 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 319-495
Cow position: chr21:19220513-19220691 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 319-495
Cow position: chr21:27677764-27677587 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 319-496
Cow position: chr21:27863237-27863407 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 88

Conread position: 319-496
Cow position: chr21:31278468-31278289 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 319-497
Cow position: chr21:47327-47145 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 11

Conread position: 319-497
Cow position: chr21:6834330-6834154 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 319-497
Cow position: chr21:8430817-8430995 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 319-497
Cow position: chr21:44724094-44724263 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 88

Conread position: 319-497
Cow position: chr21:48334504-48334687 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 71

Conread position: 320-471
Cow position: chr21:31759947-31760094 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 320-490
Cow position: chr21:19236689-19236858 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 166, 0

Conread position: 320-495
Cow position: chr21:17531414-17531236 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 320-495
Cow position: chr21:39278011-39278190 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 320-496
Cow position: chr21:14830602-14830777 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 13

Conread position: 321-497
Cow position: chr21:23535992-23535814 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 321-497
Cow position: chr21:44251563-44251738 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 321-497
Cow position: chr21:47713729-47713903 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 97

Conread position: 322-469
Cow position: chr21:20185524-20185381 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 322-470
Cow position: chr21:48242775-48242924 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 14

Conread position: 322-471
Cow position: chr21:30359074-30359216 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 322-495
Cow position: chr21:9477441-9477270 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 8

Conread position: 322-497
Cow position: chr21:38482658-38482484 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 11

Conread position: 322-497
Cow position: chr21:40475777-40475603 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 323-469
Cow position: chr21:49144724-49144870 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 323-484
Cow position: chr21:8880075-8880235 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 323-496
Cow position: chr21:868644-868818 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 13

Conread position: 323-496
Cow position: chr21:26828696-26828868 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 323-496
Cow position: chr21:28244743-28244576 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 323-497
Cow position: chr21:20160954-20160781 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 323-497
Cow position: chr21:30222619-30222450 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 85

Conread position: 323-497
Cow position: chr21:40457885-40457706 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 68

Conread position: 325-490
Cow position: chr21:24858590-24858427 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 325-497
Cow position: chr21:3178119-3177952 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 325-497
Cow position: chr21:4109051-4108880 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 325-497
Cow position: chr21:37706137-37706310 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 99

Conread position: 326-495
Cow position: chr21:39788265-39788432 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 39

Conread position: 326-497
Cow position: chr21:745443-745280 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 326-497
Cow position: chr21:27810665-27810492 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 327-495
Cow position: chr21:40266396-40266228 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 330-496
Cow position: chr21:7424737-7424908 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 84

Conread position: 330-497
Cow position: chr21:20163977-20163813 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 51

Conread position: 331-497
Cow position: chr21:29069054-29069221 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 333-459
Cow position: chr21:18578302-18578428 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 333-469
Cow position: chr21:12310739-12310605 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 333-469
Cow position: chr21:15545096-15545233 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 333-470
Cow position: chr21:40821629-40821763 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 333-478
Cow position: chr21:5476848-5476703 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 333-484
Cow position: chr21:7768742-7768893 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 333-487
Cow position: chr21:32647920-32648074 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 333-490
Cow position: chr21:15444816-15444973 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 333-495
Cow position: chr21:10148265-10148104 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 333-495
Cow position: chr21:10264301-10264140 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 333-495
Cow position: chr21:17890569-17890409 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 333-495
Cow position: chr21:19176510-19176349 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 333-495
Cow position: chr21:31658888-31659044 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 333-497
Cow position: chr21:13225983-13225820 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 333-497
Cow position: chr21:15305029-15305194 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 71

Conread position: 333-497
Cow position: chr21:20153223-20153061 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 112

Conread position: 333-497
Cow position: chr21:23568491-23568333 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 333-497
Cow position: chr21:24296499-24296663 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 135, 117

Conread position: 333-497
Cow position: chr21:42905136-42905293 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 333-497
Cow position: chr21:46809499-46809661 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 333-497
Cow position: chr21:48204952-48205116 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 336-465
Cow position: chr21:37479327-37479456 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 336-494
Cow position: chr21:11739858-11740011 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 336-495
Cow position: chr21:13589025-13588867 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 336-495
Cow position: chr21:36115870-36115710 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 336-495
Cow position: chr21:44074955-44074796 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 336-497
Cow position: chr21:71849-71692 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 72

Conread position: 336-497
Cow position: chr21:641847-641692 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 336-497
Cow position: chr21:742537-742382 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 336-497
Cow position: chr21:3379490-3379647 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 72

Conread position: 336-497
Cow position: chr21:5345144-5344983 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 336-497
Cow position: chr21:8986289-8986126 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 336-497
Cow position: chr21:12349031-12348870 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 336-497
Cow position: chr21:14452496-14452339 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 336-497
Cow position: chr21:16498778-16498621 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 336-497
Cow position: chr21:27744292-27744130 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 99

Conread position: 336-497
Cow position: chr21:29418836-29418673 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 336-497
Cow position: chr21:36763325-36763166 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 336-497
Cow position: chr21:41041211-41041049 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 100

Conread position: 336-497
Cow position: chr21:41590303-41590460 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 336-497
Cow position: chr21:41621391-41621230 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 337-493
Cow position: chr21:28598741-28598590 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 30

Conread position: 337-497
Cow position: chr21:11644704-11644861 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 337-497
Cow position: chr21:22851177-22851025 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 338-497
Cow position: chr21:17184179-17184022 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 339-495
Cow position: chr21:21686677-21686524 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 339-497
Cow position: chr21:24875612-24875458 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 340-490
Cow position: chr21:16119903-16120049 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 340-497
Cow position: chr21:11353323-11353165 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 340-497
Cow position: chr21:30970194-30970040 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 341-497
Cow position: chr21:16152698-16152546 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 342-497
Cow position: chr21:30835623-30835468 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 342-497
Cow position: chr21:32536648-32536501 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 342-497
Cow position: chr21:42017343-42017498 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 40

Conread position: 346-497
Cow position: chr21:17193495-17193646 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 84

Conread position: 348-472
Cow position: chr21:42441881-42441757 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 348-494
Cow position: chr21:8351043-8351185 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 348-494
Cow position: chr21:31258720-31258574 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 348-497
Cow position: chr21:24266310-24266461 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 364-497
Cow position: chr21:7377688-7377821 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 117, 108

Show alignments to all cow chromosomes.