Cow genome map
| Conread name: | rpan12_m19.y1 |
| Conread position: | 34-175 |
| Cow position: | chr26:28243709-28243842 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 39-187 |
| Cow position: | chr26:4363208-4363070 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 39-192 |
| Cow position: | chr26:29353599-29353752 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-170 |
| Cow position: | chr26:23001134-23001264 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-187 |
| Cow position: | chr26:19842498-19842353 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-187 |
| Cow position: | chr26:32013530-32013395 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 45-187 |
| Cow position: | chr26:35704292-35704150 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-496 |
| Cow position: | chr26:4167067-4167294 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 276-497 |
| Cow position: | chr26:34581087-34580860 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 284-497 |
| Cow position: | chr26:830085-829863 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 292-497 |
| Cow position: | chr26:23480992-23481193 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 294-487 |
| Cow position: | chr26:33728380-33728576 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 303-495 |
| Cow position: | chr26:7190491-7190680 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 305-493 |
| Cow position: | chr26:19146152-19145961 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 307-489 |
| Cow position: | chr26:28202726-28202904 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 24 |
| Conread position: | 307-497 |
| Cow position: | chr26:33037980-33038165 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 309-497 |
| Cow position: | chr26:4807800-4807612 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-465 |
| Cow position: | chr26:26919778-26919623 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 311-489 |
| Cow position: | chr26:2701743-2701921 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 311-497 |
| Cow position: | chr26:647483-647668 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 312-487 |
| Cow position: | chr26:16550226-16550056 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 312-489 |
| Cow position: | chr26:33475939-33475760 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 313-489 |
| Cow position: | chr26:135457-135628 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 313-493 |
| Cow position: | chr26:21320184-21320008 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 314-497 |
| Cow position: | chr26:12940645-12940458 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 315-497 |
| Cow position: | chr26:5407216-5407037 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 315-497 |
| Cow position: | chr26:12027995-12028179 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 315-497 |
| Cow position: | chr26:34026796-34026979 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 317-495 |
| Cow position: | chr26:17212431-17212252 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 317-496 |
| Cow position: | chr26:10764450-10764271 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 317-497 |
| Cow position: | chr26:33253081-33253258 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 318-497 |
| Cow position: | chr26:32981238-32981416 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 319-465 |
| Cow position: | chr26:10740010-10740162 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 319-495 |
| Cow position: | chr26:586640-586819 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 172 |
| Conread position: | 319-495 |
| Cow position: | chr26:3930298-3930474 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-496 |
| Cow position: | chr26:11538768-11538591 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-497 |
| Cow position: | chr26:19459928-19459751 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 319-497 |
| Cow position: | chr26:27768500-27768325 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 319-497 |
| Cow position: | chr26:34610954-34611123 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 320-493 |
| Cow position: | chr26:10219993-10220166 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 320-495 |
| Cow position: | chr26:28444659-28444835 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 320-496 |
| Cow position: | chr26:33201836-33202012 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 320-497 |
| Cow position: | chr26:4854774-4854603 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 321-497 |
| Cow position: | chr26:28605-28773 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 321-497 |
| Cow position: | chr26:4643903-4644079 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 127 |
| Conread position: | 322-437 |
| Cow position: | chr26:31205317-31205199 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 322-497 |
| Cow position: | chr26:27482334-27482508 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 322-497 |
| Cow position: | chr26:34060565-34060391 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 323-497 |
| Cow position: | chr26:23623814-23623986 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 324-497 |
| Cow position: | chr26:22798926-22799098 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 157, 86 |
| Conread position: | 325-494 |
| Cow position: | chr26:20770075-20769912 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 325-497 |
| Cow position: | chr26:6714072-6714244 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-497 |
| Cow position: | chr26:24240904-24240737 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 327-493 |
| Cow position: | chr26:20260807-20260643 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 327-495 |
| Cow position: | chr26:7148076-7148245 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 113 |
| Conread position: | 330-497 |
| Cow position: | chr26:16166471-16166637 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 333-495 |
| Cow position: | chr26:34114483-34114322 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 335-497 |
| Cow position: | chr26:13862822-13862979 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 336-460 |
| Cow position: | chr26:16423809-16423687 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 336-466 |
| Cow position: | chr26:5397939-5398068 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 336-484 |
| Cow position: | chr26:35678064-35677912 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 336-490 |
| Cow position: | chr26:25029752-25029598 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 135 |
| Conread position: | 336-495 |
| Cow position: | chr26:24988267-24988426 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-495 |
| Cow position: | chr26:32830299-32830141 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:1041218-1041057 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:8811690-8811530 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:9535729-9535576 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:13705553-13705719 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 115 |
| Conread position: | 336-497 |
| Cow position: | chr26:20291477-20291634 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:25526462-25526307 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:28202540-28202701 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:31711849-31712010 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-497 |
| Cow position: | chr26:35686610-35686451 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 337-497 |
| Cow position: | chr26:11672515-11672355 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-497 |
| Cow position: | chr26:26244955-26245112 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 340-497 |
| Cow position: | chr26:23112250-23112092 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 347-497 |
| Cow position: | chr26:16801190-16801038 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 80, 134 |
| Conread position: | 347-497 |
| Cow position: | chr26:28244036-28243887 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 348-497 |
| Cow position: | chr26:9501913-9501766 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 353-497 |
| Cow position: | chr26:29897382-29897245 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.