Cow genome map

Conread name: rpan12_m19.y1

Conread position: 34-191
Cow position: chr9:15951026-15950870 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 37

Conread position: 36-187
Cow position: chr9:41283158-41283309 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 137, 93

Conread position: 36-191
Cow position: chr9:55074995-55074852 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 39-188
Cow position: chr9:32732547-32732402 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 44

Conread position: 40-187
Cow position: chr9:10761216-10761069 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 41-187
Cow position: chr9:21888309-21888450 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 42-184
Cow position: chr9:35167313-35167447 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 42-187
Cow position: chr9:9017082-9016938 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 42-187
Cow position: chr9:9443456-9443317 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 42-187
Cow position: chr9:12284696-12284840 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 42-187
Cow position: chr9:18216963-18216818 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 139

Conread position: 42-188
Cow position: chr9:18381000-18381142 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 42-191
Cow position: chr9:5393188-5393335 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 43-179
Cow position: chr9:38961293-38961164 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 48

Conread position: 44-181
Cow position: chr9:8288760-8288893 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 44-187
Cow position: chr9:15982939-15982797 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 44-187
Cow position: chr9:19714218-19714351 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 45-181
Cow position: chr9:29338894-29338757 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 46-187
Cow position: chr9:56453473-56453614 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 49-187
Cow position: chr9:13670780-13670918 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 64-185
Cow position: chr9:61195457-61195578 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 64

Conread position: 259-495
Cow position: chr9:48046289-48046525 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 68

Conread position: 260-489
Cow position: chr9:44822572-44822344 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 152

Conread position: 284-473
Cow position: chr9:29668385-29668575 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 36

Conread position: 285-496
Cow position: chr9:26476995-26477203 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 153, 32

Conread position: 287-497
Cow position: chr9:26394564-26394361 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 287-497
Cow position: chr9:30402647-30402437 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 10

Conread position: 289-495
Cow position: chr9:20828687-20828892 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 45

Conread position: 290-497
Cow position: chr9:42061872-42062087 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 294-493
Cow position: chr9:41644965-41644766 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 297-472
Cow position: chr9:44526899-44527081 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 297-487
Cow position: chr9:7543470-7543285 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 75

Conread position: 298-497
Cow position: chr9:34423413-34423609 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 302-472
Cow position: chr9:45170589-45170418 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 302-487
Cow position: chr9:50977460-50977275 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-493
Cow position: chr9:26715053-26715239 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 11

Conread position: 305-496
Cow position: chr9:1884341-1884143 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 25

Conread position: 307-495
Cow position: chr9:34410589-34410410 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 12

Conread position: 307-495
Cow position: chr9:47516998-47517185 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 308-495
Cow position: chr9:34697500-34697313 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 309-495
Cow position: chr9:52755052-52754864 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 125

Conread position: 309-497
Cow position: chr9:26279370-26279181 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 310-454
Cow position: chr9:60138600-60138740 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 25

Conread position: 310-490
Cow position: chr9:1403730-1403553 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 310-494
Cow position: chr9:27279110-27279294 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 8

Conread position: 310-497
Cow position: chr9:35295501-35295678 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 311-495
Cow position: chr9:6839796-6839979 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 15

Conread position: 311-495
Cow position: chr9:34195999-34196180 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 170, 54

Conread position: 311-497
Cow position: chr9:39148886-39149067 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 102

Conread position: 311-497
Cow position: chr9:41416136-41416321 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 313-495
Cow position: chr9:19657166-19656990 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 313-497
Cow position: chr9:21460348-21460163 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 69

Conread position: 314-471
Cow position: chr9:26057623-26057468 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 59

Conread position: 314-494
Cow position: chr9:2037244-2037426 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 314-496
Cow position: chr9:11448000-11447821 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 107

Conread position: 315-484
Cow position: chr9:31625940-31626109 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 315-487
Cow position: chr9:6954444-6954273 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 315-495
Cow position: chr9:35028360-35028179 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 111

Conread position: 315-495
Cow position: chr9:36410541-36410362 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 315-496
Cow position: chr9:13744123-13743943 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 114, 17

Conread position: 315-497
Cow position: chr9:11380833-11380658 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 315-497
Cow position: chr9:25375924-25375748 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 315-497
Cow position: chr9:44709642-44709817 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 315-497
Cow position: chr9:63185889-63185707 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 107

Conread position: 316-489
Cow position: chr9:32052087-32052256 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 14

Conread position: 316-497
Cow position: chr9:52763941-52763772 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 316-497
Cow position: chr9:53632116-53631935 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 317-472
Cow position: chr9:28866282-28866128 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 141, 0

Conread position: 317-476
Cow position: chr9:32019516-32019357 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 317-484
Cow position: chr9:34001184-34001017 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 86

Conread position: 317-495
Cow position: chr9:12786666-12786487 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 317-495
Cow position: chr9:20017210-20017384 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 317-495
Cow position: chr9:37951091-37950911 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 317-496
Cow position: chr9:48563890-48564066 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 317-497
Cow position: chr9:9091297-9091117 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 318-494
Cow position: chr9:22447482-22447309 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 318-495
Cow position: chr9:43679929-43680106 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 83

Conread position: 318-497
Cow position: chr9:8645076-8645254 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 318-497
Cow position: chr9:8992370-8992191 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 92

Conread position: 318-497
Cow position: chr9:16811849-16811666 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 78

Conread position: 318-497
Cow position: chr9:28315237-28315417 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 108, 18

Conread position: 319-442
Cow position: chr9:28156513-28156636 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 319-489
Cow position: chr9:50647881-50648047 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 96

Conread position: 319-490
Cow position: chr9:6189549-6189384 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 17

Conread position: 319-493
Cow position: chr9:32662223-32662047 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 319-495
Cow position: chr9:41470287-41470112 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 17

Conread position: 319-495
Cow position: chr9:47510757-47510584 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 319-497
Cow position: chr9:8613400-8613223 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 169, 55

Conread position: 319-497
Cow position: chr9:12355597-12355774 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 41

Conread position: 319-497
Cow position: chr9:12910587-12910413 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 114, 93

Conread position: 319-497
Cow position: chr9:15806112-15805935 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 319-497
Cow position: chr9:23840591-23840406 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 17

Conread position: 319-497
Cow position: chr9:28747704-28747532 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 319-497
Cow position: chr9:61019552-61019374 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 320-460
Cow position: chr9:63710971-63711112 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 320-495
Cow position: chr9:5772868-5772691 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 320-495
Cow position: chr9:35128291-35128465 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 320-496
Cow position: chr9:52510929-52511106 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 320-497
Cow position: chr9:5221004-5220822 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 320-497
Cow position: chr9:9724067-9723888 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 320-497
Cow position: chr9:34286610-34286787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 102

Conread position: 320-497
Cow position: chr9:36457811-36457987 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 320-497
Cow position: chr9:41728074-41728246 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 88

Conread position: 321-470
Cow position: chr9:59173128-59172979 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 321-489
Cow position: chr9:8537122-8537288 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 321-490
Cow position: chr9:45711189-45711019 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 321-493
Cow position: chr9:51566683-51566511 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 321-495
Cow position: chr9:32670131-32669961 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 322-460
Cow position: chr9:35905181-35905049 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 322-476
Cow position: chr9:901627-901472 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 32

Conread position: 322-489
Cow position: chr9:62136300-62136134 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 322-490
Cow position: chr9:19034166-19034338 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 322-497
Cow position: chr9:38941619-38941444 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 13

Conread position: 322-497
Cow position: chr9:55013525-55013344 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 176

Conread position: 323-495
Cow position: chr9:6397969-6397798 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 323-497
Cow position: chr9:17785753-17785578 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 324-497
Cow position: chr9:34024516-34024687 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 85

Conread position: 325-466
Cow position: chr9:34279240-34279098 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 325-490
Cow position: chr9:17872288-17872129 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 325-496
Cow position: chr9:5110675-5110845 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 326-460
Cow position: chr9:26102550-26102685 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 120

Conread position: 326-463
Cow position: chr9:31215899-31216034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 326-469
Cow position: chr9:52130831-52130975 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 45

Conread position: 326-487
Cow position: chr9:51609099-51609253 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 326-490
Cow position: chr9:25583651-25583811 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 326-497
Cow position: chr9:11123660-11123497 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 326-497
Cow position: chr9:14519555-14519392 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 326-497
Cow position: chr9:14738072-14738237 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 328-497
Cow position: chr9:63785087-63784926 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 330-490
Cow position: chr9:57131322-57131476 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 330-493
Cow position: chr9:61909211-61909372 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 13

Conread position: 332-497
Cow position: chr9:61022445-61022611 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 92

Conread position: 333-465
Cow position: chr9:48017940-48017808 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 333-469
Cow position: chr9:34964907-34964778 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 333-469
Cow position: chr9:48344071-48343935 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 333-472
Cow position: chr9:52651665-52651526 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 333-476
Cow position: chr9:43345562-43345705 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 333-489
Cow position: chr9:54598500-54598653 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 333-493
Cow position: chr9:20942792-20942632 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 333-495
Cow position: chr9:34276386-34276224 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 333-495
Cow position: chr9:52257633-52257477 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 333-496
Cow position: chr9:27345762-27345597 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 108

Conread position: 333-497
Cow position: chr9:19718507-19718352 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 333-497
Cow position: chr9:31344783-31344619 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 333-497
Cow position: chr9:44396486-44396650 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 335-497
Cow position: chr9:8467888-8468045 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 336-472
Cow position: chr9:2984898-2985034 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 336-472
Cow position: chr9:29091600-29091736 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 336-482
Cow position: chr9:48367699-48367553 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 336-490
Cow position: chr9:30194841-30194992 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 101, 72

Conread position: 336-493
Cow position: chr9:53323957-53323800 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 336-493
Cow position: chr9:55256719-55256568 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 336-493
Cow position: chr9:59897426-59897577 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 336-494
Cow position: chr9:34375097-34374939 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 336-494
Cow position: chr9:40984334-40984490 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 336-495
Cow position: chr9:13722311-13722152 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 336-495
Cow position: chr9:49679940-49680100 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 336-496
Cow position: chr9:2397640-2397794 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 336-497
Cow position: chr9:9459819-9459972 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 336-497
Cow position: chr9:15215860-15215699 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 336-497
Cow position: chr9:16216808-16216969 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 149, 71

Conread position: 336-497
Cow position: chr9:23956147-23955992 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 336-497
Cow position: chr9:24887035-24887194 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 336-497
Cow position: chr9:37198957-37199115 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 336-497
Cow position: chr9:51620274-51620433 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 337-472
Cow position: chr9:12495045-12495180 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 337-478
Cow position: chr9:26578378-26578233 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 337-496
Cow position: chr9:1729856-1729687 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 337-497
Cow position: chr9:14975098-14974931 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 337-497
Cow position: chr9:27495062-27495225 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 60

Conread position: 337-497
Cow position: chr9:44759096-44758943 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 337-497
Cow position: chr9:60395218-60395060 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 338-495
Cow position: chr9:63169801-63169958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 91, 101

Conread position: 338-497
Cow position: chr9:17769153-17769306 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 339-497
Cow position: chr9:13993596-13993753 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 340-497
Cow position: chr9:21292573-21292420 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 67

Conread position: 340-497
Cow position: chr9:41282846-41283003 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 341-497
Cow position: chr9:33822952-33823106 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 342-487
Cow position: chr9:4244260-4244406 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 345-495
Cow position: chr9:22443784-22443641 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 345-497
Cow position: chr9:9815252-9815401 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 346-495
Cow position: chr9:53123926-53124075 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 346-497
Cow position: chr9:14357252-14357403 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 347-497
Cow position: chr9:37955333-37955183 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 348-494
Cow position: chr9:1712866-1712721 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 348-497
Cow position: chr9:28342813-28342663 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 348-497
Cow position: chr9:29185298-29185149 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 349-497
Cow position: chr9:11200097-11199949 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 350-489
Cow position: chr9:31514091-31513952 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 350-495
Cow position: chr9:18216068-18215924 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 88

Conread position: 352-476
Cow position: chr9:6667804-6667680 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.