Cow genome map
Conread name: | rpbfe0127_d11.y1 |
Conread position: | 189-486 |
Cow position: | chr17:41412285-41412002 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 206 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 191-472 |
Cow position: | chr17:40742-40468 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 192-442 |
Cow position: | chr17:20233187-20232941 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 188 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 225, 126 |
Conread position: | 192-442 |
Cow position: | chr17:39950627-39950872 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 181 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 223, 126 |
Conread position: | 192-454 |
Cow position: | chr17:732053-732305 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 193 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 60, 128 |
Conread position: | 192-477 |
Cow position: | chr17:5999050-5999326 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 208 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 192-479 |
Cow position: | chr17:20097878-20098150 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 207 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 192-484 |
Cow position: | chr17:4084453-4084180 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 205 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 17, 31 |
Conread position: | 192-485 |
Cow position: | chr17:11380750-11381038 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 126 |
Conread position: | 192-486 |
Cow position: | chr17:137079-136792 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:240730-240441 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 200 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 192-486 |
Cow position: | chr17:253259-252974 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 210 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 23, 56 |
Conread position: | 192-486 |
Cow position: | chr17:452272-451987 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:1458832-1458539 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 141 |
Conread position: | 192-486 |
Cow position: | chr17:1655314-1655597 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:1705837-1705551 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 192-486 |
Cow position: | chr17:6070972-6070695 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 213 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 192-486 |
Cow position: | chr17:6262300-6262014 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 126 |
Conread position: | 192-486 |
Cow position: | chr17:8204366-8204085 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:13930331-13930043 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:16855658-16855949 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 211 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 231, 126 |
Conread position: | 192-486 |
Cow position: | chr17:16897660-16897939 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 192-486 |
Cow position: | chr17:16903322-16903038 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:18124500-18124776 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 207 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 192-486 |
Cow position: | chr17:25738737-25738449 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 192-486 |
Cow position: | chr17:43146136-43146423 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 206 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 9, 17 |
Conread position: | 192-489 |
Cow position: | chr17:2170840-2170557 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 194-486 |
Cow position: | chr17:33282904-33283182 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 203 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 80, 24 |
Conread position: | 195-475 |
Cow position: | chr17:9752227-9751963 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 199 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 226, 108 |
Conread position: | 195-477 |
Cow position: | chr17:15853157-15852868 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 212 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 119, 201 |
Conread position: | 195-486 |
Cow position: | chr17:1569953-1570234 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 195-486 |
Cow position: | chr17:20079449-20079730 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 208 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 93, 126 |
Conread position: | 195-486 |
Cow position: | chr17:21714419-21714148 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 214 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 196-394 |
Cow position: | chr17:16119798-16119987 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 145 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 196-404 |
Cow position: | chr17:33290533-33290740 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 158 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 31, 125 |
Conread position: | 196-453 |
Cow position: | chr17:27792347-27792593 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 192 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-478 |
Cow position: | chr17:20085343-20085609 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 208 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 196-479 |
Cow position: | chr17:147366-147086 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 121 |
Conread position: | 196-486 |
Cow position: | chr17:1882702-1882421 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 206 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:2176417-2176131 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 208 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 258, 122 |
Conread position: | 196-486 |
Cow position: | chr17:3742596-3742312 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:5307303-5307587 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:8211087-8210806 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:13418836-13418552 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:14242260-14241968 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 212 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 226, 122 |
Conread position: | 196-486 |
Cow position: | chr17:14305901-14306175 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 196 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 196-486 |
Cow position: | chr17:15140910-15141181 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 207 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 196-486 |
Cow position: | chr17:15438231-15437947 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:15709557-15709841 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:15808407-15808122 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 122 |
Conread position: | 196-486 |
Cow position: | chr17:17257951-17257671 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 196-486 |
Cow position: | chr17:19979694-19979973 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 196-486 |
Cow position: | chr17:21768679-21768959 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-486 |
Cow position: | chr17:23321994-23322275 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 196-486 |
Cow position: | chr17:24784602-24784324 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-490 |
Cow position: | chr17:20490746-20490468 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 25, 123 |
Conread position: | 197-478 |
Cow position: | chr17:2245614-2245886 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 197-480 |
Cow position: | chr17:21420381-21420109 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 195 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 198-484 |
Cow position: | chr17:4210446-4210168 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 211 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 261, 120 |
Conread position: | 199-479 |
Cow position: | chr17:36816123-36815856 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 200-485 |
Cow position: | chr17:10842697-10842436 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 204 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 200-486 |
Cow position: | chr17:41012015-41011736 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 201-486 |
Cow position: | chr17:15327713-15327438 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 208-486 |
Cow position: | chr17:2032654-2032389 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 191 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 209-383 |
Cow position: | chr17:30900575-30900742 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 148, 96 |
Conread position: | 209-484 |
Cow position: | chr17:1785587-1785846 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 209-486 |
Cow position: | chr17:2553838-2554109 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 209-486 |
Cow position: | chr17:11085259-11085527 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 198 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 210-442 |
Cow position: | chr17:37454909-37455134 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 210-489 |
Cow position: | chr17:604646-604909 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 193 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 211-434 |
Cow position: | chr17:145999-146216 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 150 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 221, 107 |
Conread position: | 215-485 |
Cow position: | chr17:29825548-29825812 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 217-486 |
Cow position: | chr17:7561540-7561805 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 196 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 229, 101 |
Conread position: | 228-486 |
Cow position: | chr17:34575162-34574910 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 159 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 247-486 |
Cow position: | chr17:28026106-28026340 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 255-476 |
Cow position: | chr17:6080889-6080676 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 287-482 |
Cow position: | chr17:17069138-17068940 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 142 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 8, 68 |
Conread position: | 321-486 |
Cow position: | chr17:19216393-19216556 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 321-486 |
Cow position: | chr17:22253643-22253803 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 342-469 |
Cow position: | chr17:8365903-8365773 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 342-486 |
Cow position: | chr17:25463285-25463141 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 344-486 |
Cow position: | chr17:14897254-14897113 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 349-486 |
Cow position: | chr17:22562192-22562059 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 354-459 |
Cow position: | chr17:18196464-18196362 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 88 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 356-479 |
Cow position: | chr17:2005385-2005262 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 359-486 |
Cow position: | chr17:14935660-14935787 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 359-490 |
Cow position: | chr17:52580-52712 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 387-486 |
Cow position: | chr17:29303025-29302926 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 83 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.