Cow genome map
| Conread name: | rpbfe0127_d11.y1 |
| Conread position: | 191-485 |
| Cow position: | chr19:33649521-33649812 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 123 |
| Conread position: | 191-487 |
| Cow position: | chr19:42297461-42297753 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 128 |
| Conread position: | 192-375 |
| Cow position: | chr19:5901230-5901056 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 192-389 |
| Cow position: | chr19:35981442-35981247 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 192-467 |
| Cow position: | chr19:25378598-25378329 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 192-479 |
| Cow position: | chr19:28403908-28404187 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 192-484 |
| Cow position: | chr19:9705525-9705805 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 192-484 |
| Cow position: | chr19:38559626-38559908 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 229, 104 |
| Conread position: | 192-484 |
| Cow position: | chr19:38811073-38810807 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:40995-40719 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:257972-257688 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 192-486 |
| Cow position: | chr19:1585129-1584840 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 120 |
| Conread position: | 192-486 |
| Cow position: | chr19:4388242-4387968 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:7481275-7481563 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:7490760-7490475 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:12775785-12775497 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:33876077-33875790 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:39182877-39183165 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:39665889-39666174 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:40849825-40850112 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr19:44758135-44758414 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 192-489 |
| Cow position: | chr19:159193-159493 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 192-532 |
| Cow position: | chr19:28795668-28796011 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 278, 108 |
| Conread position: | 192-534 |
| Cow position: | chr19:1586593-1586939 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 100 |
| Conread position: | 194-486 |
| Cow position: | chr19:27035006-27035282 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 195-459 |
| Cow position: | chr19:35382496-35382752 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 195-465 |
| Cow position: | chr19:336240-336497 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 195-479 |
| Cow position: | chr19:39393170-39392893 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 195-486 |
| Cow position: | chr19:40885087-40885370 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 195-486 |
| Cow position: | chr19:42581623-42581910 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 74, 186 |
| Conread position: | 196-479 |
| Cow position: | chr19:20107399-20107106 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 148 |
| Conread position: | 196-484 |
| Cow position: | chr19:748611-748883 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 196-484 |
| Cow position: | chr19:3088664-3088944 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr19:3176129-3175854 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 149, 8 |
| Conread position: | 196-486 |
| Cow position: | chr19:7344689-7344408 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 196-486 |
| Cow position: | chr19:15445207-15445486 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr19:16317952-16318235 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 196-486 |
| Cow position: | chr19:20610990-20610706 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 197-477 |
| Cow position: | chr19:207161-206888 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 197-486 |
| Cow position: | chr19:28719171-28718895 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 198-486 |
| Cow position: | chr19:40834608-40834887 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 201-482 |
| Cow position: | chr19:32138264-32138541 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 201-486 |
| Cow position: | chr19:375034-375322 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 122 |
| Conread position: | 205-399 |
| Cow position: | chr19:30757870-30757678 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 183, 113 |
| Conread position: | 205-486 |
| Cow position: | chr19:5732155-5731887 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 209-479 |
| Cow position: | chr19:5248143-5248406 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 209-482 |
| Cow position: | chr19:32708818-32708553 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 210-485 |
| Cow position: | chr19:24727036-24727303 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 270, 106 |
| Conread position: | 216-486 |
| Cow position: | chr19:3142270-3142009 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 218-486 |
| Cow position: | chr19:21338207-21338469 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 225-486 |
| Cow position: | chr19:17882582-17882342 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 132, 71 |
| Conread position: | 225-486 |
| Cow position: | chr19:33944198-33943945 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 226-484 |
| Cow position: | chr19:28596003-28595761 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 226-486 |
| Cow position: | chr19:165495-165748 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 226-486 |
| Cow position: | chr19:22511148-22511399 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 236-486 |
| Cow position: | chr19:37683549-37683315 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 250-486 |
| Cow position: | chr19:17020150-17019925 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 264-486 |
| Cow position: | chr19:33905656-33905445 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 276-486 |
| Cow position: | chr19:775199-774995 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 306-484 |
| Cow position: | chr19:16129913-16129741 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 322-477 |
| Cow position: | chr19:673778-673929 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 332-484 |
| Cow position: | chr19:3113906-3113754 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 133 |
| Conread position: | 335-486 |
| Cow position: | chr19:2271593-2271741 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 335-486 |
| Cow position: | chr19:5898983-5899131 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 343-484 |
| Cow position: | chr19:42305151-42305288 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 349-485 |
| Cow position: | chr19:44396331-44396467 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.