Cow genome map
| Conread name: | rpbfe0127_d11.y1 |
| Conread position: | 192-397 |
| Cow position: | chr23:2586638-2586440 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 192-472 |
| Cow position: | chr23:1800194-1799924 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 192-473 |
| Cow position: | chr23:20153665-20153935 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 192-477 |
| Cow position: | chr23:2438750-2439031 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-478 |
| Cow position: | chr23:1958719-1958439 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-478 |
| Cow position: | chr23:15659001-15659271 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 189, 12 |
| Conread position: | 192-479 |
| Cow position: | chr23:2024528-2024805 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-479 |
| Cow position: | chr23:11781352-11781072 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 192-479 |
| Cow position: | chr23:15528143-15527865 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-479 |
| Cow position: | chr23:16056297-16056039 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 192-484 |
| Cow position: | chr23:2411080-2411359 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-485 |
| Cow position: | chr23:30212287-30212557 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 192-485 |
| Cow position: | chr23:32009052-32008775 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:1049969-1050257 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 221, 33 |
| Conread position: | 192-486 |
| Cow position: | chr23:1339217-1339506 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 126 |
| Conread position: | 192-486 |
| Cow position: | chr23:2792208-2792490 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:3708958-3708676 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:4308620-4308909 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 126 |
| Conread position: | 192-486 |
| Cow position: | chr23:4436211-4435929 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:4516097-4515809 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 192-486 |
| Cow position: | chr23:4891248-4890962 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:5625022-5625297 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 192-486 |
| Cow position: | chr23:14264904-14264618 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:14960394-14960679 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:14971391-14971676 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 163, 126 |
| Conread position: | 192-486 |
| Cow position: | chr23:16612243-16612524 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:19492114-19491826 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:22169444-22169154 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 126 |
| Conread position: | 192-486 |
| Cow position: | chr23:29442541-29442822 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:36028824-36029112 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 192-486 |
| Cow position: | chr23:37199961-37200246 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-533 |
| Cow position: | chr23:38580216-38579876 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 295, 125 |
| Conread position: | 195-471 |
| Cow position: | chr23:8289975-8289707 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 182, 127 |
| Conread position: | 195-479 |
| Cow position: | chr23:17877365-17877636 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 195-486 |
| Cow position: | chr23:38583498-38583228 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 195-497 |
| Cow position: | chr23:8705414-8705120 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 27 |
| Conread position: | 195-537 |
| Cow position: | chr23:1021370-1021701 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 146, 123 |
| Conread position: | 196-423 |
| Cow position: | chr23:19317037-19316816 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-439 |
| Cow position: | chr23:10556532-10556760 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-451 |
| Cow position: | chr23:644166-644408 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 196-452 |
| Cow position: | chr23:4080694-4080444 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-472 |
| Cow position: | chr23:41142893-41142628 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 196-477 |
| Cow position: | chr23:15179620-15179348 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:943530-943246 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:2321392-2321674 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:5872010-5872289 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 196-486 |
| Cow position: | chr23:7313540-7313824 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:11713306-11713590 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:15568370-15568655 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 196-486 |
| Cow position: | chr23:21773360-21773644 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:22144749-22145032 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:25350909-25350625 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:28221259-28220978 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr23:36097372-36097088 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-492 |
| Cow position: | chr23:1011280-1011570 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 181, 56 |
| Conread position: | 197-486 |
| Cow position: | chr23:30238815-30238542 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 200-484 |
| Cow position: | chr23:35926046-35925785 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 214-478 |
| Cow position: | chr23:609266-608996 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 162, 104 |
| Conread position: | 234-486 |
| Cow position: | chr23:4266328-4266573 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 240-479 |
| Cow position: | chr23:528583-528351 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 247-486 |
| Cow position: | chr23:19441365-19441594 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 186, 71 |
| Conread position: | 249-486 |
| Cow position: | chr23:13513563-13513345 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 255-459 |
| Cow position: | chr23:1249257-1249057 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 272-486 |
| Cow position: | chr23:37652390-37652183 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 277-485 |
| Cow position: | chr23:41568647-41568446 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 281-485 |
| Cow position: | chr23:14264342-14264143 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 321-447 |
| Cow position: | chr23:22149657-22149783 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-479 |
| Cow position: | chr23:6222068-6221917 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 321-486 |
| Cow position: | chr23:32350327-32350489 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 333-474 |
| Cow position: | chr23:7357654-7357514 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 5, 73 |
| Conread position: | 335-486 |
| Cow position: | chr23:28305352-28305204 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 335-486 |
| Cow position: | chr23:31165248-31165097 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-486 |
| Cow position: | chr23:7043498-7043647 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 105 |
| Conread position: | 336-486 |
| Cow position: | chr23:17845304-17845154 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 342-481 |
| Cow position: | chr23:617063-617200 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 348-486 |
| Cow position: | chr23:4638202-4638340 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 348-530 |
| Cow position: | chr23:15504439-15504249 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 349-479 |
| Cow position: | chr23:15216650-15216773 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 357-477 |
| Cow position: | chr23:1204941-1204819 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 382-486 |
| Cow position: | chr23:21792096-21792200 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.