Cow genome map
| Conread name: | rpbfe0127_d11.y1 |
| Conread position: | 152-486 |
| Cow position: | chr26:9114553-9114226 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 188-486 |
| Cow position: | chr26:35335571-35335882 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 191-481 |
| Cow position: | chr26:1884232-1884508 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 192-372 |
| Cow position: | chr26:6079564-6079749 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 192-435 |
| Cow position: | chr26:625254-625484 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 165, 15 |
| Conread position: | 192-479 |
| Cow position: | chr26:19348895-19349172 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 192-479 |
| Cow position: | chr26:21824057-21824329 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 192-479 |
| Cow position: | chr26:35122643-35122924 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-485 |
| Cow position: | chr26:6497013-6497288 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 283, 90 |
| Conread position: | 192-486 |
| Cow position: | chr26:367232-366944 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:5677758-5677473 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:6425598-6425310 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:6844913-6845199 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:8872446-8872156 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 192-486 |
| Cow position: | chr26:9483680-9483397 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 129, 36 |
| Conread position: | 192-486 |
| Cow position: | chr26:9841804-9842078 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:14896570-14896282 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:17326765-17326481 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:17429903-17430191 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:30586746-30587034 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:31793108-31792822 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:32932918-32933202 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:33878073-33877794 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 192-486 |
| Cow position: | chr26:34014295-34014011 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 193-382 |
| Cow position: | chr26:35394464-35394647 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 194-479 |
| Cow position: | chr26:34824279-34824541 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 195-484 |
| Cow position: | chr26:8654716-8654989 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 195-486 |
| Cow position: | chr26:32846178-32846457 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 195-487 |
| Cow position: | chr26:18035510-18035228 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 195-535 |
| Cow position: | chr26:17994779-17995112 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 280, 97 |
| Conread position: | 196-403 |
| Cow position: | chr26:4122263-4122062 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-427 |
| Cow position: | chr26:7736241-7736018 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 196-433 |
| Cow position: | chr26:2245603-2245841 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 125 |
| Conread position: | 196-469 |
| Cow position: | chr26:13022739-13023003 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-479 |
| Cow position: | chr26:23889007-23888734 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 196-479 |
| Cow position: | chr26:28707464-28707740 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-484 |
| Cow position: | chr26:27252191-27251906 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 214, 24 |
| Conread position: | 196-486 |
| Cow position: | chr26:899000-898716 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr26:1349031-1349315 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr26:2349576-2349858 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 196-486 |
| Cow position: | chr26:2417800-2418084 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr26:3028027-3028315 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 196-486 |
| Cow position: | chr26:14365635-14365908 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 196-486 |
| Cow position: | chr26:18856716-18856437 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 196-486 |
| Cow position: | chr26:30785370-30785085 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 115 |
| Conread position: | 196-486 |
| Cow position: | chr26:35561801-35561519 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 196-533 |
| Cow position: | chr26:12585941-12586277 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 111 |
| Conread position: | 198-450 |
| Cow position: | chr26:28720927-28720679 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 243, 120 |
| Conread position: | 205-486 |
| Cow position: | chr26:6792797-6792527 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 205-486 |
| Cow position: | chr26:17394301-17394570 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 206-441 |
| Cow position: | chr26:8281107-8281324 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 209-394 |
| Cow position: | chr26:14176006-14176194 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 209-489 |
| Cow position: | chr26:12668047-12667776 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 209-535 |
| Cow position: | chr26:8087658-8087343 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 30 |
| Conread position: | 215-391 |
| Cow position: | chr26:4776971-4776801 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 232-486 |
| Cow position: | chr26:13772361-13772591 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 236-486 |
| Cow position: | chr26:30753832-30754076 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 241-486 |
| Cow position: | chr26:3703588-3703350 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 270-479 |
| Cow position: | chr26:4749911-4750112 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 281-486 |
| Cow position: | chr26:615742-615940 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 37 |
| Conread position: | 327-479 |
| Cow position: | chr26:17323148-17322997 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 351-489 |
| Cow position: | chr26:4602703-4602840 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 356-486 |
| Cow position: | chr26:3225622-3225752 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.