Cow genome map
| Conread name: | rpbfe0127_d11.y1 |
| Conread position: | 192-431 |
| Cow position: | chr27:4332170-4332404 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 233, 125 |
| Conread position: | 192-451 |
| Cow position: | chr27:27665565-27665318 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-479 |
| Cow position: | chr27:8200361-8200085 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-482 |
| Cow position: | chr27:26327616-26327336 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-484 |
| Cow position: | chr27:5913493-5913207 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-484 |
| Cow position: | chr27:28294307-28294588 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:166359-166644 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:3232967-3233252 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:3991568-3991275 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 203, 96 |
| Conread position: | 192-486 |
| Cow position: | chr27:3995341-3995622 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 192-486 |
| Cow position: | chr27:8261214-8260935 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:9332301-9332013 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 192-486 |
| Cow position: | chr27:10378487-10378203 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:15034538-15034827 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 126 |
| Conread position: | 192-486 |
| Cow position: | chr27:17567667-17567402 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:19524158-19524446 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:20809969-20809681 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:24296687-24296975 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:25801619-25801907 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 192-486 |
| Cow position: | chr27:26552868-26553167 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 195, 60 |
| Conread position: | 192-486 |
| Cow position: | chr27:27193797-27194071 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:27289055-27288767 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr27:28923561-28923255 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 192-487 |
| Cow position: | chr27:12749587-12749301 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-489 |
| Cow position: | chr27:15634778-15635065 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 192-490 |
| Cow position: | chr27:30034722-30034430 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 194-486 |
| Cow position: | chr27:31267787-31267506 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 195-472 |
| Cow position: | chr27:13900448-13900183 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 195-478 |
| Cow position: | chr27:9990660-9990930 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 195-486 |
| Cow position: | chr27:1535738-1535460 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 105 |
| Conread position: | 196-401 |
| Cow position: | chr27:12147093-12147292 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-425 |
| Cow position: | chr27:18696891-18696668 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-480 |
| Cow position: | chr27:30571371-30571099 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 196-486 |
| Cow position: | chr27:797057-797338 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr27:15273523-15273803 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 196-486 |
| Cow position: | chr27:16031847-16032121 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 196-486 |
| Cow position: | chr27:22742836-22743113 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 196-486 |
| Cow position: | chr27:22797900-22798180 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 197-435 |
| Cow position: | chr27:11488245-11488013 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 197, 61 |
| Conread position: | 198-486 |
| Cow position: | chr27:22012810-22013091 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 72, 103 |
| Conread position: | 198-486 |
| Cow position: | chr27:25965398-25965696 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 200-479 |
| Cow position: | chr27:23294097-23293838 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 200-486 |
| Cow position: | chr27:12262893-12263155 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 200-486 |
| Cow position: | chr27:15374376-15374105 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 156, 5 |
| Conread position: | 205-469 |
| Cow position: | chr27:4981921-4981663 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 205-486 |
| Cow position: | chr27:8591612-8591334 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 206-488 |
| Cow position: | chr27:10282541-10282247 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 93 |
| Conread position: | 209-464 |
| Cow position: | chr27:21284652-21284898 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 145, 36 |
| Conread position: | 209-483 |
| Cow position: | chr27:25873132-25872863 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 211-486 |
| Cow position: | chr27:27729935-27730196 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 215-479 |
| Cow position: | chr27:11433660-11433407 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 183, 54 |
| Conread position: | 217-442 |
| Cow position: | chr27:25358151-25358362 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 231-394 |
| Cow position: | chr27:9255630-9255787 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 237-476 |
| Cow position: | chr27:30536502-30536273 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 248-441 |
| Cow position: | chr27:25033586-25033771 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 252-468 |
| Cow position: | chr27:10324598-10324800 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 267-477 |
| Cow position: | chr27:26599421-26599217 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 269-514 |
| Cow position: | chr27:15332319-15332081 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 216, 49 |
| Conread position: | 321-486 |
| Cow position: | chr27:5985296-5985131 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-479 |
| Cow position: | chr27:29857663-29857513 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 329-486 |
| Cow position: | chr27:25085979-25085819 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 336-486 |
| Cow position: | chr27:28686117-28686268 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 349-472 |
| Cow position: | chr27:66400-66523 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 349-472 |
| Cow position: | chr27:7926152-7926275 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-486 |
| Cow position: | chr27:25884507-25884636 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 363-486 |
| Cow position: | chr27:25786416-25786538 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 367-486 |
| Cow position: | chr27:24573703-24573822 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-489 |
| Cow position: | chr27:6016820-6016704 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.