Cow genome map
| Conread name: | rpbfe0127_d11.y1 |
| Conread position: | 142-486 |
| Cow position: | chr5:52436432-52436111 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 188-486 |
| Cow position: | chr5:4755781-4756072 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 191-486 |
| Cow position: | chr5:49117950-49118230 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 192-398 |
| Cow position: | chr5:4602904-4602704 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 192-424 |
| Cow position: | chr5:59278536-59278311 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 192-432 |
| Cow position: | chr5:31098869-31099100 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 231, 126 |
| Conread position: | 192-464 |
| Cow position: | chr5:18249450-18249185 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 192-465 |
| Cow position: | chr5:42043297-42043041 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 192-473 |
| Cow position: | chr5:6152500-6152773 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-477 |
| Cow position: | chr5:18275383-18275111 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 192-477 |
| Cow position: | chr5:34219110-34219394 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 180, 124 |
| Conread position: | 192-479 |
| Cow position: | chr5:46735889-46736167 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-484 |
| Cow position: | chr5:12132984-12132708 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 231, 75 |
| Conread position: | 192-484 |
| Cow position: | chr5:24644469-24644753 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 163, 37 |
| Conread position: | 192-484 |
| Cow position: | chr5:25902078-25902355 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 192-484 |
| Cow position: | chr5:40347889-40348173 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 129 |
| Conread position: | 192-486 |
| Cow position: | chr5:1339531-1339817 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:3966827-3966541 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 238, 69 |
| Conread position: | 192-486 |
| Cow position: | chr5:4387612-4387333 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:5925570-5925858 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:10921234-10920950 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:14543910-14544195 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 126 |
| Conread position: | 192-486 |
| Cow position: | chr5:18120082-18120370 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:18559012-18559294 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:18900369-18900085 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:23667759-23668048 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 192-486 |
| Cow position: | chr5:24101041-24100754 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:27196689-27196977 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:34698876-34698589 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 128 |
| Conread position: | 192-486 |
| Cow position: | chr5:37734764-37734456 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 107, 221 |
| Conread position: | 192-486 |
| Cow position: | chr5:44709989-44710277 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:46666399-46666110 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 126 |
| Conread position: | 192-486 |
| Cow position: | chr5:46670701-46670410 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 206, 124 |
| Conread position: | 192-486 |
| Cow position: | chr5:49222105-49222393 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:51745612-51745336 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:52611984-52612258 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 192-486 |
| Cow position: | chr5:54695405-54695698 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 192-486 |
| Cow position: | chr5:54786717-54787013 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 166, 135 |
| Conread position: | 192-486 |
| Cow position: | chr5:58244430-58244715 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:64779613-64779901 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-486 |
| Cow position: | chr5:68593162-68592883 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 192-486 |
| Cow position: | chr5:73443806-73443523 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 192-486 |
| Cow position: | chr5:73486530-73486818 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-489 |
| Cow position: | chr5:34191324-34191038 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 192-489 |
| Cow position: | chr5:49521109-49520817 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 192-489 |
| Cow position: | chr5:58190363-58190654 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 192-534 |
| Cow position: | chr5:7141711-7142046 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 286, 76 |
| Conread position: | 193-473 |
| Cow position: | chr5:30581728-30581455 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 193-486 |
| Cow position: | chr5:25929298-25929582 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 194-427 |
| Cow position: | chr5:70401291-70401072 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 225, 28 |
| Conread position: | 194-489 |
| Cow position: | chr5:58550378-58550100 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 156, 23 |
| Conread position: | 195-478 |
| Cow position: | chr5:3788615-3788338 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 195-486 |
| Cow position: | chr5:10854428-10854711 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 195-486 |
| Cow position: | chr5:12641052-12641338 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 123 |
| Conread position: | 195-486 |
| Cow position: | chr5:27550071-27550357 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 123 |
| Conread position: | 196-400 |
| Cow position: | chr5:30156745-30156547 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-410 |
| Cow position: | chr5:4879369-4879161 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-415 |
| Cow position: | chr5:74035921-74035708 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-422 |
| Cow position: | chr5:27178034-27177813 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 196-457 |
| Cow position: | chr5:28345352-28345097 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 196-459 |
| Cow position: | chr5:71621913-71622170 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-465 |
| Cow position: | chr5:34584023-34583760 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-478 |
| Cow position: | chr5:72739278-72739552 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 196-482 |
| Cow position: | chr5:18884194-18884454 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 196-484 |
| Cow position: | chr5:10513887-10514169 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-485 |
| Cow position: | chr5:23684979-23685246 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 196-485 |
| Cow position: | chr5:26076813-26077096 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-485 |
| Cow position: | chr5:31708976-31708692 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 122 |
| Conread position: | 196-486 |
| Cow position: | chr5:5105611-5105331 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:11632882-11633158 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:11922739-11923023 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:14782782-14783050 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 154, 101 |
| Conread position: | 196-486 |
| Cow position: | chr5:18704048-18703766 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 196-486 |
| Cow position: | chr5:21523418-21523709 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 196-486 |
| Cow position: | chr5:23957940-23958221 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:29031660-29031376 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:37379480-37379211 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:45180706-45180987 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:45702708-45702427 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 196-486 |
| Cow position: | chr5:46003254-46003534 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:46792238-46791954 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:47827936-47828214 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:51166920-51167195 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:54928526-54928808 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:57001890-57001606 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:59063029-59062747 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 196-486 |
| Cow position: | chr5:59145761-59145476 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 123 |
| Conread position: | 197-479 |
| Cow position: | chr5:7276219-7275943 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 197-486 |
| Cow position: | chr5:48226191-48226467 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 197-530 |
| Cow position: | chr5:34299258-34298930 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 206, 92 |
| Conread position: | 199-489 |
| Cow position: | chr5:54462344-54462623 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 200-486 |
| Cow position: | chr5:27490325-27490056 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 200-486 |
| Cow position: | chr5:40922309-40922576 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 200-487 |
| Cow position: | chr5:43989455-43989170 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 213, 118 |
| Conread position: | 201-486 |
| Cow position: | chr5:57889030-57889309 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 201-489 |
| Cow position: | chr5:11957084-11957374 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 205-475 |
| Cow position: | chr5:27005253-27004991 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 205-477 |
| Cow position: | chr5:3501746-3502009 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 205-483 |
| Cow position: | chr5:70532026-70532297 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 205-486 |
| Cow position: | chr5:47342101-47341827 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 205-486 |
| Cow position: | chr5:54858718-54858989 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 205-486 |
| Cow position: | chr5:55682995-55682726 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 208-486 |
| Cow position: | chr5:50604961-50605232 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 209-466 |
| Cow position: | chr5:49131583-49131333 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 209-479 |
| Cow position: | chr5:18399113-18399374 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 209-479 |
| Cow position: | chr5:28025069-28024823 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 209-486 |
| Cow position: | chr5:35496552-35496282 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 209-486 |
| Cow position: | chr5:37423530-37423256 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 112 |
| Conread position: | 209-533 |
| Cow position: | chr5:54622003-54621655 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 141, 109 |
| Conread position: | 210-488 |
| Cow position: | chr5:10097668-10097930 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 215-484 |
| Cow position: | chr5:62203935-62203677 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 215-486 |
| Cow position: | chr5:40791227-40790962 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 105 |
| Conread position: | 216-486 |
| Cow position: | chr5:47201911-47202167 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 219-478 |
| Cow position: | chr5:7583638-7583876 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 225-481 |
| Cow position: | chr5:33281884-33282141 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 226-486 |
| Cow position: | chr5:30567633-30567379 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 227-486 |
| Cow position: | chr5:10773901-10774154 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 231-486 |
| Cow position: | chr5:40932573-40932318 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 133, 67 |
| Conread position: | 232-486 |
| Cow position: | chr5:444875-444627 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 232-489 |
| Cow position: | chr5:58198374-58198127 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 240-486 |
| Cow position: | chr5:2916772-2916534 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 240-489 |
| Cow position: | chr5:41525209-41525442 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 249-484 |
| Cow position: | chr5:48534276-48534047 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 168, 14 |
| Conread position: | 261-486 |
| Cow position: | chr5:40130268-40130487 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 263-486 |
| Cow position: | chr5:32775097-32774882 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 272-485 |
| Cow position: | chr5:41979811-41979613 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 307-486 |
| Cow position: | chr5:75687333-75687509 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 317-486 |
| Cow position: | chr5:7756560-7756392 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 320-486 |
| Cow position: | chr5:47358989-47358826 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 321-476 |
| Cow position: | chr5:55993172-55993323 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 321-486 |
| Cow position: | chr5:4016820-4016981 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 321-486 |
| Cow position: | chr5:4683529-4683694 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-486 |
| Cow position: | chr5:41066442-41066285 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-486 |
| Cow position: | chr5:23846860-23847013 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 335-486 |
| Cow position: | chr5:34525474-34525328 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 336-484 |
| Cow position: | chr5:27063114-27063262 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-486 |
| Cow position: | chr5:9056911-9056766 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-486 |
| Cow position: | chr5:13407845-13407702 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-533 |
| Cow position: | chr5:32953330-32953137 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 349-486 |
| Cow position: | chr5:59284549-59284412 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 352-484 |
| Cow position: | chr5:56541274-56541406 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-486 |
| Cow position: | chr5:12680586-12680713 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 358-486 |
| Cow position: | chr5:50390873-50391001 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 360-481 |
| Cow position: | chr5:26095586-26095468 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 373-486 |
| Cow position: | chr5:47470007-47469894 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.