Cow genome map

Conread name: rpbfe0131_f13.y1

Conread position: 16-239
Cow position: chr11:29954602-29954384 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 38

Conread position: 26-238
Cow position: chr11:15369614-15369401 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 28

Conread position: 27-225
Cow position: chr11:35434432-35434637 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 48

Conread position: 30-239
Cow position: chr11:85723916-85723710 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 160

Conread position: 31-239
Cow position: chr11:18508808-18509018 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 42

Conread position: 31-239
Cow position: chr11:21829991-21830197 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 24

Conread position: 31-239
Cow position: chr11:35562935-35562732 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 38

Conread position: 31-240
Cow position: chr11:33369370-33369162 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 74, 16

Conread position: 31-242
Cow position: chr11:51846515-51846307 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 25

Conread position: 31-248
Cow position: chr11:27248708-27248493 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 14

Conread position: 32-233
Cow position: chr11:68660393-68660596 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 61

Conread position: 33-237
Cow position: chr11:23271786-23271989 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 89

Conread position: 33-239
Cow position: chr11:30165731-30165522 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 33-239
Cow position: chr11:48776099-48776304 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 34

Conread position: 34-217
Cow position: chr11:28078706-28078529 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 62, 35

Conread position: 34-239
Cow position: chr11:68883927-68883731 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 12

Conread position: 34-239
Cow position: chr11:69168808-69168599 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 76

Conread position: 36-213
Cow position: chr11:80695023-80695203 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 37-211
Cow position: chr11:23278939-23279116 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 22

Conread position: 37-237
Cow position: chr11:27343487-27343285 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 37-240
Cow position: chr11:8259285-8259087 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 9

Conread position: 38-231
Cow position: chr11:67208466-67208273 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 65

Conread position: 38-238
Cow position: chr11:47314209-47314418 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 162

Conread position: 38-239
Cow position: chr11:3715036-3714833 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 34

Conread position: 38-239
Cow position: chr11:30370318-30370117 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 119

Conread position: 38-239
Cow position: chr11:43914506-43914304 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 31

Conread position: 38-239
Cow position: chr11:47412058-47411853 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 38-239
Cow position: chr11:48672923-48672725 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 35

Conread position: 38-239
Cow position: chr11:54741874-54742068 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 45

Conread position: 38-239
Cow position: chr11:69417615-69417414 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 67, 30

Conread position: 38-239
Cow position: chr11:77745041-77745239 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 31

Conread position: 39-214
Cow position: chr11:35921984-35922159 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 46

Conread position: 39-226
Cow position: chr11:21590603-21590412 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 39-231
Cow position: chr11:23518404-23518599 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 39-233
Cow position: chr11:17517611-17517417 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 106, 30

Conread position: 39-233
Cow position: chr11:63435733-63435539 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 16

Conread position: 39-235
Cow position: chr11:12080055-12079853 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 20

Conread position: 39-238
Cow position: chr11:27972213-27972412 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 14

Conread position: 39-239
Cow position: chr11:4363704-4363899 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 49

Conread position: 39-239
Cow position: chr11:6319917-6320120 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 39-239
Cow position: chr11:6423187-6423386 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 12

Conread position: 39-239
Cow position: chr11:7651860-7652054 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 187, 19

Conread position: 39-239
Cow position: chr11:18119714-18119514 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 187, 20

Conread position: 39-239
Cow position: chr11:25791480-25791682 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 12

Conread position: 39-239
Cow position: chr11:33374178-33373978 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 13

Conread position: 39-239
Cow position: chr11:35924270-35924073 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 20

Conread position: 39-239
Cow position: chr11:40395649-40395452 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 66, 101

Conread position: 39-239
Cow position: chr11:40794141-40794339 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 20

Conread position: 39-239
Cow position: chr11:60516318-60516520 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 90

Conread position: 39-239
Cow position: chr11:71854068-71854266 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 107

Conread position: 39-239
Cow position: chr11:77758543-77758748 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 94

Conread position: 39-239
Cow position: chr11:80296648-80296840 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 38

Conread position: 39-240
Cow position: chr11:14470573-14470377 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 36

Conread position: 40-179
Cow position: chr11:81043321-81043460 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 29

Conread position: 40-218
Cow position: chr11:32817605-32817782 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 33

Conread position: 40-230
Cow position: chr11:23220573-23220385 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 80

Conread position: 40-233
Cow position: chr11:84385429-84385620 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 186, 29

Conread position: 40-238
Cow position: chr11:5231432-5231632 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 123

Conread position: 40-239
Cow position: chr11:2084359-2084156 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 40-239
Cow position: chr11:6643028-6642826 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 40-239
Cow position: chr11:21549690-21549493 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 42

Conread position: 40-239
Cow position: chr11:30708717-30708519 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 159

Conread position: 40-239
Cow position: chr11:30893490-30893687 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 186, 19

Conread position: 40-239
Cow position: chr11:46884587-46884386 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 29, 41

Conread position: 40-240
Cow position: chr11:32254004-32254205 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 124

Conread position: 40-248
Cow position: chr11:6245532-6245318 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 27

Conread position: 41-225
Cow position: chr11:64126425-64126238 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 41-233
Cow position: chr11:3720464-3720272 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 27

Conread position: 41-239
Cow position: chr11:27913497-27913297 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 105

Conread position: 41-239
Cow position: chr11:35924069-35923867 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 41-239
Cow position: chr11:38226453-38226255 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 28

Conread position: 41-239
Cow position: chr11:39462831-39462636 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 106

Conread position: 41-239
Cow position: chr11:45350303-45350499 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 28

Conread position: 41-239
Cow position: chr11:87171862-87172064 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 11, 96

Conread position: 41-240
Cow position: chr11:5328999-5328797 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 14

Conread position: 41-240
Cow position: chr11:32653498-32653300 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 27

Conread position: 41-240
Cow position: chr11:45742581-45742385 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 33

Conread position: 42-225
Cow position: chr11:11483533-11483339 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 39

Conread position: 42-229
Cow position: chr11:7571826-7571647 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 27

Conread position: 42-229
Cow position: chr11:44176800-44176618 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 63, 12

Conread position: 42-232
Cow position: chr11:36182900-36182714 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 33

Conread position: 42-233
Cow position: chr11:66188113-66188298 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 182, 32

Conread position: 42-236
Cow position: chr11:42016426-42016624 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 51

Conread position: 42-237
Cow position: chr11:3740182-3739968 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 42-238
Cow position: chr11:30808387-30808580 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 184, 58

Conread position: 42-239
Cow position: chr11:13500221-13500028 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 58

Conread position: 42-239
Cow position: chr11:50472528-50472329 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 42-239
Cow position: chr11:80893992-80893793 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 42-240
Cow position: chr11:14649105-14649302 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 26

Conread position: 42-240
Cow position: chr11:16315083-16314884 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 64, 27

Conread position: 42-258
Cow position: chr11:37565081-37564866 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 97

Conread position: 43-216
Cow position: chr11:65436431-65436257 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 25

Conread position: 43-239
Cow position: chr11:8496240-8496045 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 11

Conread position: 43-239
Cow position: chr11:24438011-24438206 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 30

Conread position: 43-239
Cow position: chr11:25698076-25698275 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 116

Conread position: 43-239
Cow position: chr11:33002174-33001977 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 11

Conread position: 43-239
Cow position: chr11:81167821-81168014 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 161

Conread position: 43-240
Cow position: chr11:35544295-35544096 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 44-223
Cow position: chr11:63491220-63491047 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 44-239
Cow position: chr11:18924951-18924758 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 24

Conread position: 44-240
Cow position: chr11:62606628-62606428 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 44-254
Cow position: chr11:44859082-44859289 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 181, 15

Conread position: 44-256
Cow position: chr11:46314224-46314008 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 201

Conread position: 45-193
Cow position: chr11:30528809-30528658 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 24

Conread position: 45-223
Cow position: chr11:17369734-17369560 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 97

Conread position: 45-231
Cow position: chr11:71303787-71303599 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 118

Conread position: 45-234
Cow position: chr11:62742439-62742628 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 112

Conread position: 45-239
Cow position: chr11:10563210-10563021 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 9

Conread position: 45-239
Cow position: chr11:64781297-64781099 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 45-239
Cow position: chr11:67312989-67312793 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 10

Conread position: 46-233
Cow position: chr11:7250300-7250110 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 163

Conread position: 46-237
Cow position: chr11:30638744-30638935 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 107

Conread position: 46-239
Cow position: chr11:8670222-8670024 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 23

Conread position: 46-239
Cow position: chr11:36059004-36058809 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 46-239
Cow position: chr11:42498055-42497857 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 66

Conread position: 46-239
Cow position: chr11:45700697-45700503 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 46-239
Cow position: chr11:64607036-64607244 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 46-239
Cow position: chr11:73940356-73940551 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 46-240
Cow position: chr11:7458074-7458270 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 46-240
Cow position: chr11:31024596-31024795 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 23

Conread position: 46-276
Cow position: chr11:19549680-19549457 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 180, 22

Conread position: 47-225
Cow position: chr11:36194499-36194324 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 92

Conread position: 47-225
Cow position: chr11:36361434-36361615 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 47-236
Cow position: chr11:37435788-37435972 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 178, 12

Conread position: 47-237
Cow position: chr11:6094198-6094388 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 117

Conread position: 47-239
Cow position: chr11:5075024-5075215 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 138

Conread position: 47-239
Cow position: chr11:15366779-15366960 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 19

Conread position: 47-239
Cow position: chr11:19739191-19739383 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 54

Conread position: 47-239
Cow position: chr11:20117274-20117086 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 19

Conread position: 47-239
Cow position: chr11:20194222-20194413 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 12

Conread position: 47-239
Cow position: chr11:21508216-21508015 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 47-239
Cow position: chr11:26143895-26144083 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 178, 22

Conread position: 47-239
Cow position: chr11:34616466-34616271 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 47-239
Cow position: chr11:35444251-35444057 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 120

Conread position: 47-239
Cow position: chr11:35665360-35665550 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 22

Conread position: 47-239
Cow position: chr11:36940393-36940583 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 22

Conread position: 47-239
Cow position: chr11:41437982-41438174 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 21

Conread position: 47-239
Cow position: chr11:42065858-42065662 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 47-239
Cow position: chr11:67572076-67571885 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 20

Conread position: 47-239
Cow position: chr11:81614317-81614501 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 58

Conread position: 47-247
Cow position: chr11:6413504-6413693 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 47-273
Cow position: chr11:42786479-42786707 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 26

Conread position: 48-204
Cow position: chr11:65939659-65939814 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 21

Conread position: 48-219
Cow position: chr11:70821249-70821078 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 114

Conread position: 48-225
Cow position: chr11:62102244-62102420 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 20

Conread position: 48-229
Cow position: chr11:7464830-7465012 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 48-239
Cow position: chr11:1485655-1485849 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 103

Conread position: 48-239
Cow position: chr11:6395956-6395766 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 94, 19

Conread position: 48-239
Cow position: chr11:17889523-17889718 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 48-239
Cow position: chr11:34968409-34968601 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 162

Conread position: 48-239
Cow position: chr11:36092716-36092904 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 25

Conread position: 48-239
Cow position: chr11:53773892-53773694 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 48-239
Cow position: chr11:62620580-62620389 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 104

Conread position: 48-239
Cow position: chr11:66041473-66041291 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 10

Conread position: 48-240
Cow position: chr11:33414431-33414248 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 51

Conread position: 49-239
Cow position: chr11:12555101-12555293 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 49-239
Cow position: chr11:42835747-42835938 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 59

Conread position: 49-239
Cow position: chr11:61675665-61675481 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 19

Conread position: 49-239
Cow position: chr11:62964698-62964506 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 159

Conread position: 49-239
Cow position: chr11:65058409-65058600 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 139

Conread position: 50-233
Cow position: chr11:62811502-62811316 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 98

Conread position: 50-239
Cow position: chr11:2788602-2788406 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 50-239
Cow position: chr11:19147940-19148124 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 95

Conread position: 50-239
Cow position: chr11:42884583-42884773 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 116

Conread position: 50-239
Cow position: chr11:47837518-47837332 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 21

Conread position: 50-262
Cow position: chr11:49486990-49486770 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 19

Conread position: 51-238
Cow position: chr11:47784980-47784788 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 16

Conread position: 52-237
Cow position: chr11:38236445-38236266 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 174, 52

Conread position: 52-237
Cow position: chr11:62230388-62230195 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 52-239
Cow position: chr11:75285555-75285747 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 52-239
Cow position: chr11:81041767-81041957 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 30

Conread position: 52-244
Cow position: chr11:74839802-74839618 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 174, 7

Conread position: 52-259
Cow position: chr11:23278762-23278972 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 53

Conread position: 53-237
Cow position: chr11:56311401-56311581 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 126

Conread position: 53-239
Cow position: chr11:35347552-35347740 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 53-240
Cow position: chr11:35724167-35723980 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 15

Conread position: 53-261
Cow position: chr11:5559483-5559269 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 54-231
Cow position: chr11:63849751-63849931 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 54-237
Cow position: chr11:75479823-75480007 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 16, 28

Conread position: 54-239
Cow position: chr11:9237649-9237834 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 50

Conread position: 54-239
Cow position: chr11:13863901-13864092 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 54-239
Cow position: chr11:13940386-13940198 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 72

Conread position: 54-239
Cow position: chr11:19591797-19591982 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 47

Conread position: 54-239
Cow position: chr11:46329699-46329512 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 42

Conread position: 54-240
Cow position: chr11:36112607-36112431 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 172, 45

Conread position: 55-204
Cow position: chr11:67345461-67345615 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 55-209
Cow position: chr11:69035357-69035202 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 55-218
Cow position: chr11:8828205-8828040 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 15

Conread position: 55-218
Cow position: chr11:24551588-24551425 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 152

Conread position: 55-223
Cow position: chr11:33271627-33271460 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 107

Conread position: 55-230
Cow position: chr11:46010062-46010232 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 171, 45

Conread position: 55-232
Cow position: chr11:48296226-48296050 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 61

Conread position: 55-232
Cow position: chr11:50629469-50629296 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 35

Conread position: 55-233
Cow position: chr11:36978005-36977824 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 55-233
Cow position: chr11:40516918-40517097 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 55-234
Cow position: chr11:76896175-76896357 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 55-235
Cow position: chr11:82732958-82733133 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 27

Conread position: 55-237
Cow position: chr11:36847369-36847182 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 55-238
Cow position: chr11:35732886-35733070 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 94

Conread position: 55-238
Cow position: chr11:55744666-55744481 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 55-238
Cow position: chr11:59471302-59471115 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 55-238
Cow position: chr11:76890240-76890059 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 36

Conread position: 55-238
Cow position: chr11:79666063-79666248 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 97

Conread position: 55-238
Cow position: chr11:86664584-86664768 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 148

Conread position: 55-239
Cow position: chr11:3728683-3728498 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 183

Conread position: 55-239
Cow position: chr11:3920106-3920291 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 164

Conread position: 55-239
Cow position: chr11:7874339-7874151 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 55-239
Cow position: chr11:13592937-13592748 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 55-239
Cow position: chr11:15772515-15772701 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 99

Conread position: 55-239
Cow position: chr11:25604151-25603960 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 55-239
Cow position: chr11:35769084-35768898 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 104

Conread position: 55-239
Cow position: chr11:36914368-36914554 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 55-239
Cow position: chr11:38334720-38334536 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 72

Conread position: 55-239
Cow position: chr11:44620149-44619967 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 171, 14

Conread position: 55-239
Cow position: chr11:45619546-45619365 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 14

Conread position: 55-239
Cow position: chr11:46747660-46747848 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 55-239
Cow position: chr11:49210618-49210809 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 122

Conread position: 55-239
Cow position: chr11:49396330-49396513 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 18

Conread position: 55-239
Cow position: chr11:52690329-52690507 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 14

Conread position: 55-239
Cow position: chr11:54428817-54428631 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 55-239
Cow position: chr11:55334116-55333922 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 51

Conread position: 55-239
Cow position: chr11:57503677-57503495 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 82

Conread position: 55-239
Cow position: chr11:59024155-59024347 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 168

Conread position: 55-239
Cow position: chr11:64101969-64101784 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 18

Conread position: 55-239
Cow position: chr11:81065852-81066037 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 107

Conread position: 55-239
Cow position: chr11:85571608-85571793 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 50

Conread position: 55-240
Cow position: chr11:19578825-19579004 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 58

Conread position: 55-240
Cow position: chr11:25968657-25968843 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 14

Conread position: 55-269
Cow position: chr11:41238993-41239208 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 116

Conread position: 56-214
Cow position: chr11:26823308-26823148 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 56-225
Cow position: chr11:80564493-80564321 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 122

Conread position: 56-238
Cow position: chr11:72871094-72870917 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 48

Conread position: 56-239
Cow position: chr11:10066545-10066361 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 0

Conread position: 56-239
Cow position: chr11:36521077-36520887 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 107

Conread position: 56-239
Cow position: chr11:66939395-66939580 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 56-240
Cow position: chr11:34778244-34778432 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 56-240
Cow position: chr11:37042171-37041983 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 57-225
Cow position: chr11:25614606-25614786 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 58-201
Cow position: chr11:80503968-80504111 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 21

Conread position: 58-213
Cow position: chr11:4390097-4389941 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 58-213
Cow position: chr11:68592214-68592057 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 58-214
Cow position: chr11:38656988-38657145 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 58-233
Cow position: chr11:18574660-18574834 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 170

Conread position: 58-233
Cow position: chr11:40459299-40459126 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 38

Conread position: 58-238
Cow position: chr11:41278382-41278199 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 58-239
Cow position: chr11:5264292-5264109 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 48

Conread position: 59-196
Cow position: chr11:4436527-4436390 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 47

Conread position: 59-222
Cow position: chr11:6429558-6429727 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 59-239
Cow position: chr11:1980071-1980255 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 59-239
Cow position: chr11:3715433-3715252 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 46

Conread position: 59-239
Cow position: chr11:25783908-25783725 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 59-239
Cow position: chr11:32126809-32126624 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 59-239
Cow position: chr11:40538742-40538563 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 79

Conread position: 59-239
Cow position: chr11:41213246-41213061 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 59-239
Cow position: chr11:42084479-42084663 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 59-239
Cow position: chr11:53510302-53510491 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 59-239
Cow position: chr11:68326669-68326851 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 59-239
Cow position: chr11:70600633-70600816 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 50

Conread position: 59-239
Cow position: chr11:77241895-77241718 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 83

Conread position: 59-245
Cow position: chr11:4411679-4411863 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 84

Conread position: 59-258
Cow position: chr11:82725373-82725169 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 106

Conread position: 60-224
Cow position: chr11:51683410-51683244 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 106

Conread position: 60-239
Cow position: chr11:1067246-1067427 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 60-240
Cow position: chr11:6581026-6580844 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 60-246
Cow position: chr11:37490384-37490571 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 26

Conread position: 61-225
Cow position: chr11:25620199-25620363 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 82

Conread position: 61-229
Cow position: chr11:49153131-49152971 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 76

Conread position: 61-239
Cow position: chr11:10095535-10095356 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 98

Conread position: 61-239
Cow position: chr11:13042959-13043133 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 14

Conread position: 61-239
Cow position: chr11:19118791-19118970 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 161

Conread position: 61-239
Cow position: chr11:30192368-30192191 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 12

Conread position: 61-239
Cow position: chr11:60296929-60296743 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 61-239
Cow position: chr11:68570190-68570368 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 42, 61

Conread position: 62-221
Cow position: chr11:67931300-67931461 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 62-225
Cow position: chr11:21886020-21885861 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 62-239
Cow position: chr11:63975325-63975142 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 62-239
Cow position: chr11:79548743-79548925 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 96

Conread position: 62-240
Cow position: chr11:30764684-30764502 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 62-240
Cow position: chr11:63485121-63484949 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 11

Conread position: 63-232
Cow position: chr11:69421516-69421693 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 154

Conread position: 63-239
Cow position: chr11:75749656-75749492 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 42

Conread position: 63-239
Cow position: chr11:80370303-80370127 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 147

Conread position: 63-266
Cow position: chr11:26057457-26057667 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 64-224
Cow position: chr11:45276960-45277123 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 64-233
Cow position: chr11:81175786-81175615 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 94

Conread position: 64-240
Cow position: chr11:5935928-5936104 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 33

Conread position: 65-224
Cow position: chr11:44016433-44016272 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 65-238
Cow position: chr11:68909665-68909841 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 65-239
Cow position: chr11:3896511-3896688 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 65-239
Cow position: chr11:19487291-19487468 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 42

Conread position: 65-239
Cow position: chr11:26442315-26442492 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 65-239
Cow position: chr11:37099985-37100160 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 40, 98

Conread position: 65-239
Cow position: chr11:47310796-47310973 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 65-239
Cow position: chr11:63998903-63999079 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 66-237
Cow position: chr11:7560187-7560014 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 66-239
Cow position: chr11:60720267-60720443 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 66-240
Cow position: chr11:63498945-63499119 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 86

Conread position: 67-230
Cow position: chr11:19247019-19247178 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 76

Conread position: 67-235
Cow position: chr11:73573832-73573662 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 21

Conread position: 67-237
Cow position: chr11:83028177-83028007 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 49

Conread position: 67-239
Cow position: chr11:31875279-31875105 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 67-239
Cow position: chr11:41215918-41215745 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 48

Conread position: 67-239
Cow position: chr11:41980018-41980192 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 34

Conread position: 67-239
Cow position: chr11:53817040-53816865 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 67-240
Cow position: chr11:15526292-15526121 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 35

Conread position: 68-239
Cow position: chr11:62812768-62812937 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 40

Conread position: 69-230
Cow position: chr11:43641571-43641408 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 69-239
Cow position: chr11:5417069-5416897 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 69-239
Cow position: chr11:37804369-37804541 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 69-239
Cow position: chr11:49149229-49149061 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 82

Conread position: 69-239
Cow position: chr11:80412826-80413001 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 69-239
Cow position: chr11:81673611-81673438 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 71-240
Cow position: chr11:30209642-30209812 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 155, 33

Conread position: 73-219
Cow position: chr11:12742315-12742457 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 73-226
Cow position: chr11:56348652-56348804 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 73-233
Cow position: chr11:6233699-6233861 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 73-233
Cow position: chr11:9836276-9836438 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 73-238
Cow position: chr11:30322315-30322479 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 52

Conread position: 73-239
Cow position: chr11:5176202-5176364 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 35

Conread position: 73-239
Cow position: chr11:7500928-7500761 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 41

Conread position: 73-239
Cow position: chr11:17721622-17721789 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 89

Conread position: 73-239
Cow position: chr11:29308761-29308593 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 73-239
Cow position: chr11:35351854-35352028 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 73-239
Cow position: chr11:55398972-55399139 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 97

Conread position: 73-239
Cow position: chr11:56288724-56288560 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 91

Conread position: 73-239
Cow position: chr11:62889713-62889881 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 73-239
Cow position: chr11:63065831-63065665 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 82

Conread position: 73-239
Cow position: chr11:68913322-68913153 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 73-239
Cow position: chr11:75090040-75090206 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 153, 31

Conread position: 73-240
Cow position: chr11:21124430-21124599 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 73-240
Cow position: chr11:47110435-47110260 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 73-240
Cow position: chr11:63407873-63407707 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 41

Conread position: 73-240
Cow position: chr11:78380890-78381053 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 65

Conread position: 73-248
Cow position: chr11:27907949-27907780 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 64

Conread position: 73-248
Cow position: chr11:36300405-36300578 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 152, 27

Conread position: 74-220
Cow position: chr11:53888471-53888617 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 139

Conread position: 74-239
Cow position: chr11:35980963-35981129 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 125

Conread position: 76-239
Cow position: chr11:36920402-36920564 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 27

Conread position: 77-226
Cow position: chr11:15881245-15881394 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 77-239
Cow position: chr11:70483676-70483839 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 85

Conread position: 79-237
Cow position: chr11:40012016-40012175 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 48

Conread position: 79-239
Cow position: chr11:49207884-49207723 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 79-239
Cow position: chr11:81405994-81406156 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 82

Conread position: 80-240
Cow position: chr11:26535956-26535798 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 26

Conread position: 80-240
Cow position: chr11:64409138-64408984 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 66

Conread position: 81-209
Cow position: chr11:899607-899477 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 25

Conread position: 82-238
Cow position: chr11:63849090-63849246 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 20

Conread position: 82-239
Cow position: chr11:47755210-47755374 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 84-225
Cow position: chr11:63695671-63695818 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 84-239
Cow position: chr11:2836028-2835871 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 84-239
Cow position: chr11:26343270-26343114 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 77

Conread position: 84-239
Cow position: chr11:29659727-29659572 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 47

Conread position: 84-239
Cow position: chr11:29677375-29677219 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 19, 74

Conread position: 84-239
Cow position: chr11:34644826-34644667 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 84-239
Cow position: chr11:35109372-35109526 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 16

Conread position: 84-239
Cow position: chr11:35960813-35960969 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 75

Conread position: 84-240
Cow position: chr11:9176215-9176063 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 142, 16

Conread position: 84-241
Cow position: chr11:34144751-34144909 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 142

Conread position: 84-248
Cow position: chr11:39854854-39855014 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 51

Conread position: 85-218
Cow position: chr11:2281156-2281290 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 85-224
Cow position: chr11:34279914-34279771 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 85-233
Cow position: chr11:63475504-63475654 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 76

Conread position: 85-238
Cow position: chr11:21173270-21173424 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 52

Conread position: 85-238
Cow position: chr11:60486249-60486405 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 86-237
Cow position: chr11:76248212-76248064 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 14

Conread position: 86-239
Cow position: chr11:6296912-6297067 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 86-239
Cow position: chr11:45872144-45872298 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 73

Conread position: 86-240
Cow position: chr11:35149568-35149410 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 108

Conread position: 90-239
Cow position: chr11:29786331-29786486 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 90-240
Cow position: chr11:35926747-35926897 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 136, 91

Conread position: 91-232
Cow position: chr11:8544855-8544998 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 92-237
Cow position: chr11:66325947-66326095 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 92-238
Cow position: chr11:76653181-76653033 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 92-239
Cow position: chr11:19277992-19278141 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 92-239
Cow position: chr11:35182827-35182976 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 96-237
Cow position: chr11:71868448-71868588 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 34

Conread position: 104-238
Cow position: chr11:35140057-35139922 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 104-239
Cow position: chr11:5219018-5219148 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 121, 32

Conread position: 104-239
Cow position: chr11:17807814-17807950 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 104-239
Cow position: chr11:19232803-19232939 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 104-239
Cow position: chr11:26632865-26633001 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 104-239
Cow position: chr11:41281193-41281057 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 104-239
Cow position: chr11:48660077-48659947 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 25

Conread position: 104-239
Cow position: chr11:63202100-63202237 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 104-239
Cow position: chr11:87155668-87155532 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 105-239
Cow position: chr11:8683932-8684067 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 105-239
Cow position: chr11:35669811-35669939 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 36

Conread position: 105-239
Cow position: chr11:85723344-85723209 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 105-240
Cow position: chr11:29779749-29779613 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 113-239
Cow position: chr11:38202109-38201982 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 116-240
Cow position: chr11:45849361-45849485 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 134-239
Cow position: chr11:37982459-37982565 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 134-239
Cow position: chr11:78780740-78780846 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 134-316
Cow position: chr11:34623289-34623105 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 142

Conread position: 135-239
Cow position: chr11:62168214-62168318 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 39

Show alignments to all cow chromosomes.