• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rpbfe0131_f13.y1
        

               
Conread position:
               
13-230
               

               
Cow position:
               
chr24:18750938-18750723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr24:15584726-15584937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
28-239
               

               
Cow position:
               
chr24:26569669-26569463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr24:18484786-18484986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr24:10294181-10294384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr24:21824802-21824996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
32-239
               

               
Cow position:
               
chr24:26695734-26695942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
34-238
               

               
Cow position:
               
chr24:36286772-36286576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
192, 33
               

               
Conread position:
               
34-239
               

               
Cow position:
               
chr24:8677039-8676829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
36-239
               

               
Cow position:
               
chr24:44762210-44762414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
37-238
               

               
Cow position:
               
chr24:3404821-3404632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
37-239
               

               
Cow position:
               
chr24:10242576-10242777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
37-239
               

               
Cow position:
               
chr24:27553310-27553101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
38-225
               

               
Cow position:
               
chr24:27719326-27719506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr24:13888909-13888708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr24:36711402-36711200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
39-175
               

               
Cow position:
               
chr24:22179194-22179058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr24:6265143-6265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr24:10438023-10437829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr24:11028483-11028682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:885242-885436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:3176457-3176656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:19000249-19000053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:25201491-25201289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:33238048-33238259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:34079128-34079333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 178
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr24:34595521-34595723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr24:27149587-27149388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
40-222
               

               
Cow position:
               
chr24:3193068-3193249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
40-225
               

               
Cow position:
               
chr24:38006514-38006697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
40-237
               

               
Cow position:
               
chr24:11035316-11035498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr24:17689405-17689605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr24:18344266-18344069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr24:22114934-22114732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr24:22420170-22419966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
40-240
               

               
Cow position:
               
chr24:18405073-18405276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
40-240
               

               
Cow position:
               
chr24:43373267-43373065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
41-225
               

               
Cow position:
               
chr24:27040252-27040068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
41-238
               

               
Cow position:
               
chr24:18268927-18268731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr24:12121103-12120902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr24:16995082-16994887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr24:18541254-18541444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr24:19599111-19598911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr24:28775353-28775552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 114
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr24:21606474-21606672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr24:3148039-3148228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr24:22567307-22567109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr24:39903805-39903998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr24:44103969-44104165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
42-240
               

               
Cow position:
               
chr24:28990765-28990566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr24:18730547-18730350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr24:19965877-19966070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
183, 25
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr24:25756096-25756294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
43-258
               

               
Cow position:
               
chr24:34768368-34768578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr24:39760227-39760031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr24:8602789-8602981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 185
               

               
Conread position:
               
45-239
               

               
Cow position:
               
chr24:32609848-32609653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 126
               

               
Conread position:
               
45-239
               

               
Cow position:
               
chr24:32890852-32891038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
46-192
               

               
Cow position:
               
chr24:7917182-7917328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chr24:10309832-10309647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr24:19535059-19535250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
181, 39
               

               
Conread position:
               
47-202
               

               
Cow position:
               
chr24:35210256-35210098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
47-231
               

               
Cow position:
               
chr24:35335279-35335105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr24:27919323-27919135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr24:29677713-29677904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr24:37267861-37267669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr24:3464250-3464443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 185
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr24:9222187-9222377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr24:18021070-18021266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr24:20017226-20017422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr24:23863429-23863623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr24:43219889-43220068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
47-240
               

               
Cow position:
               
chr24:21519628-21519430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr24:28476707-28476527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr24:4634967-4635162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr24:4822436-4822243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr24:16089425-16089234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr24:25733065-25732864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr24:29587192-29587006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
49-210
               

               
Cow position:
               
chr24:12241917-12241754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
49-225
               

               
Cow position:
               
chr24:16303491-16303656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr24:32978980-32979162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr24:39523254-39523443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr24:28700237-28700059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr24:31383301-31383121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
51-237
               

               
Cow position:
               
chr24:16641108-16640917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
51-239
               

               
Cow position:
               
chr24:23046701-23046892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
53-237
               

               
Cow position:
               
chr24:35365512-35365700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr24:34301845-34302032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr24:26928751-26928965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
54-236
               

               
Cow position:
               
chr24:40025189-40025368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
54-237
               

               
Cow position:
               
chr24:27958280-27958462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
54-239
               

               
Cow position:
               
chr24:18137105-18137296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
55-219
               

               
Cow position:
               
chr24:40592900-40592744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
55-221
               

               
Cow position:
               
chr24:27791556-27791710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr24:27219899-27220069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr24:26588406-26588232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr24:27906625-27906450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr24:30236062-30235882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr24:42862814-42862632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr24:6007980-6008163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr24:22511750-22511564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:3542492-3542305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:3656174-3656360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:11692695-11692509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:11921717-11921905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:14256535-14256718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:17308953-17309131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:18811021-18810837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:27810339-27810163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:36554512-36554692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:39304721-39304915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:39910843-39911027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr24:42904000-42903815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 155
               

               
Conread position:
               
55-248
               

               
Cow position:
               
chr24:19658723-19658533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr24:18702590-18702379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
56-225
               

               
Cow position:
               
chr24:38427922-38428092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr24:25142806-25142617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
56-238
               

               
Cow position:
               
chr24:19624053-19623862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr24:162194-162009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr24:19730970-19730785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr24:20588362-20588176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr24:44896229-44896044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr24:250345-250533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr24:23574971-23575157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr24:26880940-26880758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
56-302
               

               
Cow position:
               
chr24:28788045-28787788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
57-239
               

               
Cow position:
               
chr24:34273007-34272816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chr24:9300817-9300632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chr24:20225931-20225741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
57-258
               

               
Cow position:
               
chr24:15340267-15340469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
58-206
               

               
Cow position:
               
chr24:22155515-22155367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
58-230
               

               
Cow position:
               
chr24:27285009-27284832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
58-239
               

               
Cow position:
               
chr24:5152712-5152529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
59-216
               

               
Cow position:
               
chr24:43027039-43027197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr24:11840369-11840194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
59-240
               

               
Cow position:
               
chr24:11836215-11836399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
59-241
               

               
Cow position:
               
chr24:22641278-22641094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
59-248
               

               
Cow position:
               
chr24:22156335-22156142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr24:15861405-15861573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
60-237
               

               
Cow position:
               
chr24:10300263-10300084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
60-239
               

               
Cow position:
               
chr24:22647150-22647335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr24:2261853-2261673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr24:43445827-43445993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
62-238
               

               
Cow position:
               
chr24:22079645-22079470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr24:7914191-7914012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr24:11155481-11155660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr24:13586808-13586986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr24:27300344-27300164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr24:21715167-21715345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
65-249
               

               
Cow position:
               
chr24:25947679-25947867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
66-219
               

               
Cow position:
               
chr24:2359006-2359155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
67-192
               

               
Cow position:
               
chr24:27280357-27280234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
67-239
               

               
Cow position:
               
chr24:20801168-20801340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
67-239
               

               
Cow position:
               
chr24:26001564-26001393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
67-239
               

               
Cow position:
               
chr24:28342540-28342362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
67-239
               

               
Cow position:
               
chr24:34006029-34006203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
68-237
               

               
Cow position:
               
chr24:14373402-14373575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
69-233
               

               
Cow position:
               
chr24:15289002-15288839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr24:2992705-2992874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr24:19179261-19179431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr24:15557169-15557336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr24:17104397-17104564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
159, 31
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr24:36010601-36010426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
73-218
               

               
Cow position:
               
chr24:40578348-40578206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr24:38693706-38693859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-237
               

               
Cow position:
               
chr24:18874649-18874813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr24:390271-390109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr24:25194437-25194271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr24:27066401-27066236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr24:34896530-34896693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr24:42984566-42984397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
74-223
               

               
Cow position:
               
chr24:32191228-32191078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
77-239
               

               
Cow position:
               
chr24:11036670-11036829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
78-239
               

               
Cow position:
               
chr24:17751942-17752106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
80-224
               

               
Cow position:
               
chr24:35632145-35632002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
84-216
               

               
Cow position:
               
chr24:18817549-18817416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-218
               

               
Cow position:
               
chr24:42008179-42008045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-223
               

               
Cow position:
               
chr24:17178766-17178626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-235
               

               
Cow position:
               
chr24:36173619-36173773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr24:5632256-5632415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr24:27271089-27270932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr24:31816735-31816584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr24:32230344-32230500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr24:33098312-33098467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr24:44987212-44987369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-240
               

               
Cow position:
               
chr24:18696042-18695880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-243
               

               
Cow position:
               
chr24:22221540-22221380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
85-239
               

               
Cow position:
               
chr24:17832659-17832815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
86-236
               

               
Cow position:
               
chr24:15473687-15473534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
86-239
               

               
Cow position:
               
chr24:17407549-17407395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
90-239
               

               
Cow position:
               
chr24:35249961-35250106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
91-239
               

               
Cow position:
               
chr24:20791719-20791869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
92-231
               

               
Cow position:
               
chr24:18401165-18401306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
92-239
               

               
Cow position:
               
chr24:15353596-15353448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
104-233
               

               
Cow position:
               
chr24:12200268-12200397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
104-239
               

               
Cow position:
               
chr24:16645179-16645314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
104-239
               

               
Cow position:
               
chr24:17294056-17294191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-236
               

               
Cow position:
               
chr24:11735933-11736062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
106-240
               

               
Cow position:
               
chr24:26554457-26554592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               
Show alignments to all cow chromosomes.