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Cow genome map

           
Conread name:
           
rpbfe0131_f13.y1
        

               
Conread position:
               
9-225
               

               
Cow position:
               
chr9:151635-151852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 214
               

               
Conread position:
               
23-246
               

               
Cow position:
               
chr9:52755069-52754843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr9:1751122-1751337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr9:35295480-35295689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 106
               

               
Conread position:
               
32-239
               

               
Cow position:
               
chr9:11506086-11506300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
32-239
               

               
Cow position:
               
chr9:39148877-39149078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr9:26683632-26683412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
33-239
               

               
Cow position:
               
chr9:647563-647776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr9:50310970-50310762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
33-273
               

               
Cow position:
               
chr9:23840607-23840361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
34-232
               

               
Cow position:
               
chr9:35933016-35932822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
34-238
               

               
Cow position:
               
chr9:16216776-16216979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
34-239
               

               
Cow position:
               
chr9:28315217-28315428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
34-240
               

               
Cow position:
               
chr9:13945398-13945606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
34-240
               

               
Cow position:
               
chr9:27261593-27261390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
35-233
               

               
Cow position:
               
chr9:9494959-9495149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
35-239
               

               
Cow position:
               
chr9:44396458-44396661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
37-233
               

               
Cow position:
               
chr9:61019567-61019369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
37-239
               

               
Cow position:
               
chr9:52689815-52689612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
38-238
               

               
Cow position:
               
chr9:19034149-19034352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 194
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr9:7611988-7611793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr9:13993565-13993764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr9:17785771-17785567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr9:26557758-26557967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr9:45444958-45445163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
39-184
               

               
Cow position:
               
chr9:58232524-58232378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
39-216
               

               
Cow position:
               
chr9:2945744-2945922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
39-225
               

               
Cow position:
               
chr9:18425712-18425896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
39-233
               

               
Cow position:
               
chr9:48046332-48046532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr9:48367728-48367528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr9:3198383-3198190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:2397613-2397806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:7805582-7805774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:8573184-8573392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:12398395-12398597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:25965041-25964834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:27686381-27686584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:30012673-30012872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:30402634-30402426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:34484388-34484594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:40221387-40221187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:41470303-41470099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:43623063-43623267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:48118878-48118691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:55495189-55494987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr9:56262311-56262108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr9:36457799-36457999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
39-244
               

               
Cow position:
               
chr9:6948797-6948996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
39-250
               

               
Cow position:
               
chr9:63185894-63185685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
40-216
               

               
Cow position:
               
chr9:45170583-45170406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr9:4629909-4630102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr9:12910595-12910402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr9:17677311-17677111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr9:31694236-31694033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr9:32662236-32662032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
41-238
               

               
Cow position:
               
chr9:34024500-34024697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr9:9091300-9091106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr9:33411764-33411572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
185, 18
               

               
Conread position:
               
42-216
               

               
Cow position:
               
chr9:62859486-62859658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr9:47510768-47510586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr9:5221009-5220823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:1884337-1884131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:3573270-3573465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:4181743-4181550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:6839800-6839992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:12355588-12355785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:12428698-12428501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:16811853-16811655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:35845219-35845017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr9:41416133-41416332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
42-240
               

               
Cow position:
               
chr9:27308075-27307881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
43-192
               

               
Cow position:
               
chr9:5399266-5399417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr9:8998158-8998342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr9:5772877-5772678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr9:25375932-25375737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
43-240
               

               
Cow position:
               
chr9:9724078-9723875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
43-240
               

               
Cow position:
               
chr9:34195998-34196194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
44-239
               

               
Cow position:
               
chr9:17027006-17027196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
44-239
               

               
Cow position:
               
chr9:31346754-31346949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
45-239
               

               
Cow position:
               
chr9:38941630-38941433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
5, 23
               

               
Conread position:
               
45-239
               

               
Cow position:
               
chr9:48730230-48730429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
46-224
               

               
Cow position:
               
chr9:31625938-31626117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr9:6929990-6929792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr9:8834324-8834128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr9:8901417-8901228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr9:20755948-20755761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr9:55013535-55013333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
47-186
               

               
Cow position:
               
chr9:60138606-60138740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
47-217
               

               
Cow position:
               
chr9:35049290-35049456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
47-225
               

               
Cow position:
               
chr9:13722329-13722154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr9:20828713-20828899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
47-235
               

               
Cow position:
               
chr9:14975122-14974924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
47-235
               

               
Cow position:
               
chr9:44141997-44141812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
47-237
               

               
Cow position:
               
chr9:43679930-43680117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr9:6954445-6954251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr9:35729225-35729032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr9:38624818-38624626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr9:6446913-6447107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr9:28156508-28156692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr9:34410587-34410397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr9:34697497-34697303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 184
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr9:42061900-42062098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr9:50977446-50977253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
48-237
               

               
Cow position:
               
chr9:26715060-26715251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
48-237
               

               
Cow position:
               
chr9:34286605-34286795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
48-238
               

               
Cow position:
               
chr9:22723778-22723585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr9:21030114-21030307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr9:41644945-41644751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr9:58448318-58448124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
49-237
               

               
Cow position:
               
chr9:33822927-33823115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
177, 105
               

               
Conread position:
               
49-237
               

               
Cow position:
               
chr9:56032508-56032318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr9:31344801-31344609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr9:11309662-11309859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr9:37934429-37934237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
49-240
               

               
Cow position:
               
chr9:13670445-13670633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
50-215
               

               
Cow position:
               
chr9:26057618-26057456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr9:10635536-10635350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr9:9311669-9311857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr9:44709641-44709828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr9:3356946-3356754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr9:3847204-3847401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 193
               

               
Conread position:
               
51-239
               

               
Cow position:
               
chr9:34917367-34917186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
51-239
               

               
Cow position:
               
chr9:47591172-47590982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
51-240
               

               
Cow position:
               
chr9:11950220-11950030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
52-213
               

               
Cow position:
               
chr9:26578397-26578230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
52-237
               

               
Cow position:
               
chr9:43352786-43352973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
52-237
               

               
Cow position:
               
chr9:53123901-53124086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr9:28263328-28263517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-239
               

               
Cow position:
               
chr9:45483921-45484110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chr9:49374001-49374213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr9:58440564-58440372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr9:8537120-8537304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr9:20579773-20579595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr9:24748492-24748678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr9:52510927-52511118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
54-237
               

               
Cow position:
               
chr9:34375110-34374928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
55-223
               

               
Cow position:
               
chr9:45711188-45711018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr9:19657160-19656992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr9:54640000-54639835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-227
               

               
Cow position:
               
chr9:44526926-44527103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-229
               

               
Cow position:
               
chr9:60741366-60741195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr9:8645080-8645259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr9:26477029-26477209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr9:53632110-53631930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr9:13744118-13743932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:1403722-1403537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 172
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:3762648-3762835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:5068656-5068840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:8613397-8613212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
165, 119
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:9573138-9573322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:12280788-12280970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:20017213-20017397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:20901302-20901129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:32670131-32669948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:35466707-35466523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:35832798-35832620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:39061426-39061610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:46981408-46981228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:52763938-52763761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr9:53258240-53258055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
55-240
               

               
Cow position:
               
chr9:54677070-54677264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
56-188
               

               
Cow position:
               
chr9:28866276-28866143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-234
               

               
Cow position:
               
chr9:55284519-55284351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr9:8716970-8716784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr9:30074308-30074489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
56-238
               

               
Cow position:
               
chr9:28747705-28747522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr9:15806112-15805924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr9:26279356-26279170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr9:40270731-40270546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr9:35403396-35403583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
57-235
               

               
Cow position:
               
chr9:6397971-6397789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
57-238
               

               
Cow position:
               
chr9:26102546-26102726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
57-238
               

               
Cow position:
               
chr9:31359428-31359602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
58-233
               

               
Cow position:
               
chr9:34279240-34279060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
58-234
               

               
Cow position:
               
chr9:5110675-5110852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
58-237
               

               
Cow position:
               
chr9:52130829-52131007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 147
               

               
Conread position:
               
58-239
               

               
Cow position:
               
chr9:52638352-52638168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
58-240
               

               
Cow position:
               
chr9:17872288-17872110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
59-233
               

               
Cow position:
               
chr9:53323967-53323791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr9:14738071-14738247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr9:27279126-27279307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr9:5456352-5456176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr9:11123660-11123486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr9:21292588-21292409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr9:38866160-38865984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr9:39011650-39011470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr9:8467879-8468072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
166, 37
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr9:51620265-51620438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
60-239
               

               
Cow position:
               
chr9:34423439-34423621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
61-233
               

               
Cow position:
               
chr9:62136296-62136121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr9:5342422-5342249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr9:9753579-9753392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr9:28718538-28718711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr9:33128033-33127855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr9:46344747-46344935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
62-233
               

               
Cow position:
               
chr9:17277070-17276896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
62-238
               

               
Cow position:
               
chr9:44314886-44314708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr9:26394525-26394350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr9:29984284-29984463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr9:35547087-35547267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr9:63134211-63134395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
62-242
               

               
Cow position:
               
chr9:55173818-55173636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
62-274
               

               
Cow position:
               
chr9:34760543-34760331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
63-191
               

               
Cow position:
               
chr9:9431886-9432013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
63-211
               

               
Cow position:
               
chr9:29091594-29091743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
63-229
               

               
Cow position:
               
chr9:15215866-15215698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
63-237
               

               
Cow position:
               
chr9:17769145-17769315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr9:7543433-7543260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr9:16115782-16115609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr9:27355742-27355920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr9:27358528-27358706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr9:55892441-55892266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
64-238
               

               
Cow position:
               
chr9:49679935-49680112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
64-239
               

               
Cow position:
               
chr9:36634329-36634506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
64-239
               

               
Cow position:
               
chr9:63785085-63784915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
65-219
               

               
Cow position:
               
chr9:39142674-39142826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
66-236
               

               
Cow position:
               
chr9:21780750-21780920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
66-239
               

               
Cow position:
               
chr9:12495042-12495213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
67-238
               

               
Cow position:
               
chr9:27345761-27345586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
67-239
               

               
Cow position:
               
chr9:45749260-45749436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr9:40603495-40603707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
69-213
               

               
Cow position:
               
chr9:32019497-32019352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr9:12786646-12786474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr9:22408587-22408758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr9:41282842-41283014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr9:54183690-54183521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
69-240
               

               
Cow position:
               
chr9:64629532-64629364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
73-204
               

               
Cow position:
               
chr9:2984902-2985034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-207
               

               
Cow position:
               
chr9:52651658-52651523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-219
               

               
Cow position:
               
chr9:16826368-16826217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr9:36410516-36410364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
73-238
               

               
Cow position:
               
chr9:37951066-37950899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-238
               

               
Cow position:
               
chr9:44759093-44758933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:17634991-17634824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:20942785-20942617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:24191321-24191153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:24887039-24887205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:30665166-30664989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:34964900-34964744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:39709687-39709856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:54598507-54598672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
73-239
               

               
Cow position:
               
chr9:63169803-63169971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
74-239
               

               
Cow position:
               
chr9:20355703-20355866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
74-239
               

               
Cow position:
               
chr9:37198962-37199126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
74-241
               

               
Cow position:
               
chr9:2026251-2026077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
75-239
               

               
Cow position:
               
chr9:37955338-37955172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
77-239
               

               
Cow position:
               
chr9:9358656-9358809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
77-239
               

               
Cow position:
               
chr9:53139297-53139133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
77-239
               

               
Cow position:
               
chr9:54986323-54986156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
78-239
               

               
Cow position:
               
chr9:48182671-48182510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
78-240
               

               
Cow position:
               
chr9:58662082-58662243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
81-230
               

               
Cow position:
               
chr9:11200098-11199947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
84-237
               

               
Cow position:
               
chr9:12226140-12225982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
84-238
               

               
Cow position:
               
chr9:14357257-14357413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-238
               

               
Cow position:
               
chr9:55529648-55529797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:9815258-9815412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:10010657-10010809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:18216067-18215911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:22443778-22443628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:29185295-29185138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:48115528-48115678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:52998533-52998381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr9:53061498-53061661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
84-240
               

               
Cow position:
               
chr9:31514090-31513935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
85-234
               

               
Cow position:
               
chr9:27495077-27495231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
85-238
               

               
Cow position:
               
chr9:58369147-58368998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
85-239
               

               
Cow position:
               
chr9:32307388-32307232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
85-239
               

               
Cow position:
               
chr9:55438586-55438436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
86-230
               

               
Cow position:
               
chr9:33541899-33542045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
86-235
               

               
Cow position:
               
chr9:28342808-28342656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
86-239
               

               
Cow position:
               
chr9:62471524-62471679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
90-239
               

               
Cow position:
               
chr9:41964881-41964736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
90-239
               

               
Cow position:
               
chr9:46930311-46930457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
91-233
               

               
Cow position:
               
chr9:1443766-1443624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
92-239
               

               
Cow position:
               
chr9:40855975-40855826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
104-214
               

               
Cow position:
               
chr9:35360426-35360316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-239
               

               
Cow position:
               
chr9:44093219-44093083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
104-239
               

               
Cow position:
               
chr9:53454574-53454438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
105-239
               

               
Cow position:
               
chr9:9443744-9443602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
105-239
               

               
Cow position:
               
chr9:41394783-41394648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
108-239
               

               
Cow position:
               
chr9:41481726-41481594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
114-239
               

               
Cow position:
               
chr9:1729801-1729675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
125-239
               

               
Cow position:
               
chr9:9316339-9316453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
135-239
               

               
Cow position:
               
chr9:18828160-18828055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               
Show alignments to all cow chromosomes.