Cow genome map


           Conread name:
           rpfco0103_n16.y1
        

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 192
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 192
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               160, 43
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               58, 91
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 82
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 97
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               136, 27
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 189
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               160, 206
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               160, 205
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               160, 31
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               160, 19
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               167, 29
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               164, 33
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               168, 29
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               149, 44
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               203, 101
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 224
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-162
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-164
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               2-213
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               4-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               4-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               157, 8
               

               Conread position:
               4-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 170
               

               Conread position:
               5-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               8-164
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               10-152
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               10-164
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               10-164
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 85
               

               Conread position:
               12-206
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               12-208
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               12-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               175, 39
               

               Conread position:
               16-156
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               25-207
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               29-170
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-206
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-215
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               37-207
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               39-207
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               43-215
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               45-215
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               54-162
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-203
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-206
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               54-207
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-215
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               54-215
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 155
               

               Conread position:
               54-229
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               162, 37
               

               Conread position:
               55-207
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               113, 137
               

               Conread position:
               56-215
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               57-207
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               57-215
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               108, 59
               

               Conread position:
               57-215
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               61-207
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               63-206
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-207
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               64-224
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               65-193
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               
Show alignments to all cow chromosomes.