Cow genome map

Conread name: rpfco0103_n16.y1

Conread position: 1-154
Cow position: chr10:26577207-26577360 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr10:16645537-16645383 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr10:34673558-34673710 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 44

Conread position: 1-159
Cow position: chr10:35753305-35753145 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-162
Cow position: chr10:48098269-48098434 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 1-164
Cow position: chr10:14963593-14963430 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr10:28569720-28569887 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-164
Cow position: chr10:39438659-39438499 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 24

Conread position: 1-164
Cow position: chr10:57736511-57736344 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1-167
Cow position: chr10:33665499-33665663 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 1-167
Cow position: chr10:34906366-34906532 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-170
Cow position: chr10:10134634-10134805 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 92

Conread position: 1-171
Cow position: chr10:29322542-29322708 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-179
Cow position: chr10:58234927-58235103 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 1-190
Cow position: chr10:24547916-24548104 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 1-203
Cow position: chr10:6719557-6719760 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 192

Conread position: 1-203
Cow position: chr10:9526420-9526216 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 192

Conread position: 1-203
Cow position: chr10:14817502-14817301 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 43

Conread position: 1-203
Cow position: chr10:19503812-19503619 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1-203
Cow position: chr10:19895057-19895258 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 90, 0

Conread position: 1-203
Cow position: chr10:25259685-25259889 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 64

Conread position: 1-203
Cow position: chr10:31401241-31401035 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 160, 0

Conread position: 1-203
Cow position: chr10:51944020-51944218 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 1-206
Cow position: chr10:51305983-51306192 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 91

Conread position: 1-206
Cow position: chr10:60960597-60960802 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 32

Conread position: 1-207
Cow position: chr10:1488504-1488703 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 82

Conread position: 1-207
Cow position: chr10:10859573-10859368 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 202, 0

Conread position: 1-207
Cow position: chr10:19394923-19394721 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 97

Conread position: 1-207
Cow position: chr10:22616986-22616775 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 0

Conread position: 1-207
Cow position: chr10:23886788-23886590 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 1-207
Cow position: chr10:31910604-31910804 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 27

Conread position: 1-207
Cow position: chr10:33002582-33002377 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 189

Conread position: 1-207
Cow position: chr10:41736963-41737169 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 92

Conread position: 1-207
Cow position: chr10:46664578-46664787 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 160, 206

Conread position: 1-207
Cow position: chr10:52782546-52782337 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 160, 205

Conread position: 1-207
Cow position: chr10:57458376-57458586 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 160, 0

Conread position: 1-207
Cow position: chr10:63778211-63778416 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 202, 0

Conread position: 1-208
Cow position: chr10:25562583-25562377 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 200, 0

Conread position: 1-208
Cow position: chr10:37908174-37907968 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 200, 0

Conread position: 1-208
Cow position: chr10:42403420-42403626 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 200, 0

Conread position: 1-208
Cow position: chr10:55343322-55343526 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 167, 0

Conread position: 1-209
Cow position: chr10:49846433-49846641 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-215
Cow position: chr10:5264358-5264569 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 1-215
Cow position: chr10:15818135-15817922 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 31

Conread position: 1-215
Cow position: chr10:19678527-19678742 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 160, 19

Conread position: 1-215
Cow position: chr10:22786558-22786770 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 90, 0

Conread position: 1-215
Cow position: chr10:40421186-40420970 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 167, 29

Conread position: 1-215
Cow position: chr10:45769702-45769913 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 164, 33

Conread position: 1-215
Cow position: chr10:47976546-47976758 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 168, 29

Conread position: 1-215
Cow position: chr10:55580601-55580393 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 149, 44

Conread position: 1-215
Cow position: chr10:59588511-59588296 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 91

Conread position: 1-216
Cow position: chr10:6489527-6489741 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 160, 38

Conread position: 1-217
Cow position: chr10:54529478-54529262 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 203, 101

Conread position: 1-219
Cow position: chr10:5150999-5151226 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 224

Conread position: 1-224
Cow position: chr10:16985896-16986119 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-162
Cow position: chr10:31638066-31638222 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 2-164
Cow position: chr10:30243364-30243526 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-203
Cow position: chr10:22390255-22390448 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 2-207
Cow position: chr10:2394801-2394600 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 2-207
Cow position: chr10:36001864-36002062 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 2-210
Cow position: chr10:16598347-16598553 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 166, 0

Conread position: 2-213
Cow position: chr10:58264901-58264693 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 90

Conread position: 3-211
Cow position: chr10:14098658-14098452 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 31

Conread position: 3-216
Cow position: chr10:51925081-51925292 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 88, 60

Conread position: 3-217
Cow position: chr10:37818900-37818684 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 88

Conread position: 3-219
Cow position: chr10:77050-77264 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 4-203
Cow position: chr10:21422494-21422289 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 70

Conread position: 4-207
Cow position: chr10:24731975-24732177 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 157, 8

Conread position: 4-216
Cow position: chr10:20735367-20735577 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 87, 170

Conread position: 5-203
Cow position: chr10:53973514-53973707 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 147, 29

Conread position: 8-164
Cow position: chr10:30441378-30441225 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 10-152
Cow position: chr10:53674488-53674631 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 10-164
Cow position: chr10:58066467-58066314 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 10-164
Cow position: chr10:66127523-66127678 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 85

Conread position: 12-206
Cow position: chr10:16740390-16740195 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 16

Conread position: 12-208
Cow position: chr10:3984060-3984255 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 178, 0

Conread position: 12-215
Cow position: chr10:10752312-10752105 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 13-215
Cow position: chr10:4310860-4311060 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 175, 39

Conread position: 16-156
Cow position: chr10:10489297-10489158 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 25-207
Cow position: chr10:25509380-25509563 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 29-170
Cow position: chr10:46226772-46226913 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 35-206
Cow position: chr10:30914188-30914359 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 35-215
Cow position: chr10:32503142-32503319 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 37-207
Cow position: chr10:29165969-29166146 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 62

Conread position: 39-207
Cow position: chr10:64596122-64596294 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 55

Conread position: 43-215
Cow position: chr10:888626-888796 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 45-215
Cow position: chr10:14189110-14188947 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 54-162
Cow position: chr10:38014083-38014191 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 54-203
Cow position: chr10:58259805-58259656 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 54-206
Cow position: chr10:57457042-57457198 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 54-207
Cow position: chr10:34554378-34554225 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 54-215
Cow position: chr10:7367073-7366915 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 36

Conread position: 54-215
Cow position: chr10:8923645-8923809 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 155

Conread position: 54-229
Cow position: chr10:13765453-13765279 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 162, 37

Conread position: 55-207
Cow position: chr10:42745624-42745777 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 137

Conread position: 56-215
Cow position: chr10:61304994-61305152 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 57-207
Cow position: chr10:60032862-60032711 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 34

Conread position: 57-215
Cow position: chr10:15292985-15293146 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 59

Conread position: 57-215
Cow position: chr10:23912783-23912624 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 146, 0

Conread position: 61-207
Cow position: chr10:24752875-24753017 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 63-206
Cow position: chr10:44817502-44817645 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 64-207
Cow position: chr10:9798473-9798334 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 64-224
Cow position: chr10:49568924-49569083 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 110

Conread position: 65-193
Cow position: chr10:30460366-30460498 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Show alignments to all cow chromosomes.