Cow genome map
Conread name: | rpfco0103_n16.y1 |
Conread position: | 1-152 |
Cow position: | chr11:28843121-28843269 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 1-154 |
Cow position: | chr11:19890547-19890697 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 62, 17 |
Conread position: | 1-154 |
Cow position: | chr11:45282599-45282752 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-155 |
Cow position: | chr11:6154077-6154228 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1-155 |
Cow position: | chr11:6644883-6645036 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 122 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-155 |
Cow position: | chr11:19787811-19787962 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-155 |
Cow position: | chr11:44576076-44575920 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 55, 42 |
Conread position: | 1-159 |
Cow position: | chr11:3797072-3797230 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-163 |
Cow position: | chr11:48649618-48649785 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 90, 24 |
Conread position: | 1-164 |
Cow position: | chr11:12353281-12353118 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-164 |
Cow position: | chr11:17831570-17831402 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 53, 37 |
Conread position: | 1-166 |
Cow position: | chr11:53147877-53147715 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 132 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 1-173 |
Cow position: | chr11:11534235-11534071 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-191 |
Cow position: | chr11:69074974-69075160 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-202 |
Cow position: | chr11:45277492-45277289 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 160, 17 |
Conread position: | 1-203 |
Cow position: | chr11:3703983-3704182 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 1-203 |
Cow position: | chr11:16251591-16251381 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 1-203 |
Cow position: | chr11:35579917-35580123 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 148 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 159, 51 |
Conread position: | 1-203 |
Cow position: | chr11:37068641-37068444 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 65, 102 |
Conread position: | 1-203 |
Cow position: | chr11:44637098-44636892 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 130, 144 |
Conread position: | 1-203 |
Cow position: | chr11:44642618-44642421 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 140 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1-203 |
Cow position: | chr11:64334520-64334723 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 137 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 158, 0 |
Conread position: | 1-203 |
Cow position: | chr11:68571009-68570808 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 154 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 1-203 |
Cow position: | chr11:71846686-71846480 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 1-205 |
Cow position: | chr11:37118147-37118355 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 153 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 91, 116 |
Conread position: | 1-206 |
Cow position: | chr11:34615931-34616136 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 152 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-206 |
Cow position: | chr11:48672371-48672573 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 150, 103 |
Conread position: | 1-207 |
Cow position: | chr11:5032114-5031905 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 150 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 158, 90 |
Conread position: | 1-207 |
Cow position: | chr11:12316424-12316215 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 158, 206 |
Conread position: | 1-207 |
Cow position: | chr11:17112964-17112762 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 1-207 |
Cow position: | chr11:21631770-21631983 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 147 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 210 |
Conread position: | 1-207 |
Cow position: | chr11:27939149-27939355 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 169, 163 |
Conread position: | 1-207 |
Cow position: | chr11:35275958-35276173 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-207 |
Cow position: | chr11:53778279-53778484 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 156, 33 |
Conread position: | 1-207 |
Cow position: | chr11:58990173-58990379 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-207 |
Cow position: | chr11:68750986-68750777 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 144 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 160, 60 |
Conread position: | 1-208 |
Cow position: | chr11:2422079-2422288 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 143 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 164, 180 |
Conread position: | 1-208 |
Cow position: | chr11:43593655-43593861 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 148 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 202, 0 |
Conread position: | 1-208 |
Cow position: | chr11:49505163-49505373 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 142 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 164, 204 |
Conread position: | 1-208 |
Cow position: | chr11:62979140-62979351 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 161, 0 |
Conread position: | 1-215 |
Cow position: | chr11:35363158-35363375 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 160, 95 |
Conread position: | 1-215 |
Cow position: | chr11:50153154-50152939 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 158 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 160, 9 |
Conread position: | 1-215 |
Cow position: | chr11:59702147-59702363 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 119, 88 |
Conread position: | 1-215 |
Cow position: | chr11:64090423-64090207 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 160, 54 |
Conread position: | 1-216 |
Cow position: | chr11:36309747-36309532 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 69, 52 |
Conread position: | 1-216 |
Cow position: | chr11:46591990-46592199 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 145 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-224 |
Cow position: | chr11:41577342-41577128 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 158 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 2-158 |
Cow position: | chr11:33413897-33414053 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 126 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-171 |
Cow position: | chr11:7924921-7924757 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-203 |
Cow position: | chr11:17968912-17968711 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-203 |
Cow position: | chr11:69118963-69119168 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 152 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 2-213 |
Cow position: | chr11:3769623-3769415 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 89, 38 |
Conread position: | 2-213 |
Cow position: | chr11:63847515-63847725 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 155 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 159, 87 |
Conread position: | 2-215 |
Cow position: | chr11:40818980-40818761 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 158 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 89, 5 |
Conread position: | 2-215 |
Cow position: | chr11:41809813-41809597 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 159, 89 |
Conread position: | 2-215 |
Cow position: | chr11:42083147-42083355 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 187, 74 |
Conread position: | 2-216 |
Cow position: | chr11:986610-986811 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 149 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 2-229 |
Cow position: | chr11:80820334-80820107 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 157 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 159, 5 |
Conread position: | 3-202 |
Cow position: | chr11:27248157-27248357 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 152, 93 |
Conread position: | 3-207 |
Cow position: | chr11:81174555-81174759 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 169, 88 |
Conread position: | 3-213 |
Cow position: | chr11:10294261-10294468 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 145 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 40, 77 |
Conread position: | 4-171 |
Cow position: | chr11:77751100-77750935 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 5-155 |
Cow position: | chr11:32749774-32749924 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 122 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-215 |
Cow position: | chr11:86926254-86926050 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 31, 76 |
Conread position: | 7-207 |
Cow position: | chr11:56518641-56518439 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 154, 38 |
Conread position: | 10-152 |
Cow position: | chr11:80923664-80923521 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 10-203 |
Cow position: | chr11:35684827-35684629 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 13-207 |
Cow position: | chr11:31580251-31580062 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 14-164 |
Cow position: | chr11:71391930-71391784 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 19-203 |
Cow position: | chr11:1362799-1362612 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 133 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 43, 28 |
Conread position: | 21-215 |
Cow position: | chr11:36986645-36986843 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 140 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 132, 21 |
Conread position: | 25-187 |
Cow position: | chr11:34962749-34962910 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 26-206 |
Cow position: | chr11:35238516-35238700 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 27-206 |
Cow position: | chr11:7315436-7315259 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 27-214 |
Cow position: | chr11:36315289-36315478 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 131 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 35-203 |
Cow position: | chr11:1071397-1071226 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 122 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 35-203 |
Cow position: | chr11:70273000-70273166 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 131, 28 |
Conread position: | 39-173 |
Cow position: | chr11:65857558-65857692 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 40-207 |
Cow position: | chr11:85723403-85723569 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 42-215 |
Cow position: | chr11:65430768-65430936 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 54-207 |
Cow position: | chr11:9222010-9221854 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 57-158 |
Cow position: | chr11:33526795-33526895 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 57-205 |
Cow position: | chr11:11125381-11125530 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 60-207 |
Cow position: | chr11:77207770-77207917 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 60-229 |
Cow position: | chr11:75748157-75748325 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 65-203 |
Cow position: | chr11:30912265-30912124 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 96, 26 |
Show alignments to all cow chromosomes.