Cow genome map
Conread name: | rpfco0103_n16.y1 |
Conread position: | 1-157 |
Cow position: | chr12:3160711-3160861 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-159 |
Cow position: | chr12:31959537-31959695 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 99, 9 |
Conread position: | 1-159 |
Cow position: | chr12:37843362-37843205 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-164 |
Cow position: | chr12:15089134-15089300 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-164 |
Cow position: | chr12:37514588-37514424 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 119 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-164 |
Cow position: | chr12:45630162-45630000 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 82, 44 |
Conread position: | 1-164 |
Cow position: | chr12:48437267-48437098 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 1-171 |
Cow position: | chr12:19865885-19866055 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 87, 96 |
Conread position: | 1-186 |
Cow position: | chr12:36313509-36313693 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 152, 65 |
Conread position: | 1-203 |
Cow position: | chr12:17000905-17001107 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 142 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 158, 60 |
Conread position: | 1-203 |
Cow position: | chr12:17007842-17008050 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 31, 37 |
Conread position: | 1-203 |
Cow position: | chr12:18421283-18421078 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 160, 90 |
Conread position: | 1-203 |
Cow position: | chr12:19851972-19852170 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 136 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 1-203 |
Cow position: | chr12:25561014-25561217 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 160, 73 |
Conread position: | 1-203 |
Cow position: | chr12:42966644-42966845 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 153 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 1-206 |
Cow position: | chr12:43583990-43583785 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 136 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-207 |
Cow position: | chr12:2242246-2242041 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 62, 171 |
Conread position: | 1-207 |
Cow position: | chr12:9987808-9987600 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 160, 205 |
Conread position: | 1-207 |
Cow position: | chr12:18937032-18937240 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 160 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 160, 26 |
Conread position: | 1-207 |
Cow position: | chr12:26869153-26868946 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 161, 101 |
Conread position: | 1-207 |
Cow position: | chr12:27505755-27505545 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 82, 207 |
Conread position: | 1-207 |
Cow position: | chr12:27803401-27803197 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 158, 46 |
Conread position: | 1-207 |
Cow position: | chr12:40158593-40158390 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 171, 42 |
Conread position: | 1-207 |
Cow position: | chr12:40910647-40910440 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 156 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 152, 95 |
Conread position: | 1-208 |
Cow position: | chr12:2967816-2968026 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 142 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 160, 206 |
Conread position: | 1-208 |
Cow position: | chr12:7108828-7109038 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 150 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-208 |
Cow position: | chr12:16359517-16359724 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 154 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-208 |
Cow position: | chr12:22601098-22601308 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 142 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 164, 204 |
Conread position: | 1-209 |
Cow position: | chr12:37770514-37770728 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 149 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 88, 186 |
Conread position: | 1-213 |
Cow position: | chr12:37123156-37123367 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 152 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 1-223 |
Cow position: | chr12:18123330-18123551 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 169 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 215, 90 |
Conread position: | 2-172 |
Cow position: | chr12:18545514-18545684 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 103, 96 |
Conread position: | 2-206 |
Cow position: | chr12:44766732-44766931 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 84, 35 |
Conread position: | 3-164 |
Cow position: | chr12:42181493-42181335 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 3-202 |
Cow position: | chr12:6240952-6241157 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 155 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 3-207 |
Cow position: | chr12:19420287-19420087 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 150 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 7-207 |
Cow position: | chr12:4342072-4341874 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 151 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 74, 162 |
Conread position: | 7-215 |
Cow position: | chr12:18020501-18020713 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 78, 200 |
Conread position: | 11-162 |
Cow position: | chr12:15121995-15122140 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 15-203 |
Cow position: | chr12:39486087-39486278 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 146, 76 |
Conread position: | 27-216 |
Cow position: | chr12:29119567-29119756 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 179 |
Conread position: | 37-215 |
Cow position: | chr12:9229805-9229626 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 130 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 16, 140 |
Conread position: | 39-155 |
Cow position: | chr12:4719267-4719383 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 90 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 40-215 |
Cow position: | chr12:5134821-5135000 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 126 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 110, 170 |
Conread position: | 47-208 |
Cow position: | chr12:30728551-30728385 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 121 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 54-207 |
Cow position: | chr12:30590473-30590628 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 107, 37 |
Conread position: | 55-208 |
Cow position: | chr12:4866513-4866664 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 55-215 |
Cow position: | chr12:36954678-36954518 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 113 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 63-171 |
Cow position: | chr12:32391550-32391658 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 64-203 |
Cow position: | chr12:42167352-42167493 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 97, 30 |
Show alignments to all cow chromosomes.