Cow genome map

Conread name: rpfco0103_n16.y1

Conread position: 1-157
Cow position: chr12:3160711-3160861 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 1-159
Cow position: chr12:31959537-31959695 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 9

Conread position: 1-159
Cow position: chr12:37843362-37843205 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-164
Cow position: chr12:15089134-15089300 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 1-164
Cow position: chr12:37514588-37514424 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-164
Cow position: chr12:45630162-45630000 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 44

Conread position: 1-164
Cow position: chr12:48437267-48437098 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-171
Cow position: chr12:19865885-19866055 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 96

Conread position: 1-186
Cow position: chr12:36313509-36313693 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 65

Conread position: 1-203
Cow position: chr12:17000905-17001107 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 158, 60

Conread position: 1-203
Cow position: chr12:17007842-17008050 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 37

Conread position: 1-203
Cow position: chr12:18421283-18421078 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 90

Conread position: 1-203
Cow position: chr12:19851972-19852170 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-203
Cow position: chr12:25561014-25561217 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 73

Conread position: 1-203
Cow position: chr12:42966644-42966845 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 1-206
Cow position: chr12:43583990-43583785 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-207
Cow position: chr12:2242246-2242041 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 171

Conread position: 1-207
Cow position: chr12:9987808-9987600 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 160, 205

Conread position: 1-207
Cow position: chr12:18937032-18937240 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 160, 26

Conread position: 1-207
Cow position: chr12:26869153-26868946 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 161, 101

Conread position: 1-207
Cow position: chr12:27505755-27505545 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 207

Conread position: 1-207
Cow position: chr12:27803401-27803197 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 158, 46

Conread position: 1-207
Cow position: chr12:40158593-40158390 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 42

Conread position: 1-207
Cow position: chr12:40910647-40910440 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 152, 95

Conread position: 1-208
Cow position: chr12:2967816-2968026 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 206

Conread position: 1-208
Cow position: chr12:7108828-7109038 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 1-208
Cow position: chr12:16359517-16359724 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-208
Cow position: chr12:22601098-22601308 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 164, 204

Conread position: 1-209
Cow position: chr12:37770514-37770728 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 186

Conread position: 1-213
Cow position: chr12:37123156-37123367 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 1-223
Cow position: chr12:18123330-18123551 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 215, 90

Conread position: 2-172
Cow position: chr12:18545514-18545684 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 96

Conread position: 2-206
Cow position: chr12:44766732-44766931 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 35

Conread position: 3-164
Cow position: chr12:42181493-42181335 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-202
Cow position: chr12:6240952-6241157 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 3-207
Cow position: chr12:19420287-19420087 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 7-207
Cow position: chr12:4342072-4341874 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 74, 162

Conread position: 7-215
Cow position: chr12:18020501-18020713 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 200

Conread position: 11-162
Cow position: chr12:15121995-15122140 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 15-203
Cow position: chr12:39486087-39486278 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 76

Conread position: 27-216
Cow position: chr12:29119567-29119756 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 179

Conread position: 37-215
Cow position: chr12:9229805-9229626 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 140

Conread position: 39-155
Cow position: chr12:4719267-4719383 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 40-215
Cow position: chr12:5134821-5135000 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 170

Conread position: 47-208
Cow position: chr12:30728551-30728385 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 54-207
Cow position: chr12:30590473-30590628 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 107, 37

Conread position: 55-208
Cow position: chr12:4866513-4866664 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 55-215
Cow position: chr12:36954678-36954518 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 63-171
Cow position: chr12:32391550-32391658 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 64-203
Cow position: chr12:42167352-42167493 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 30

Show alignments to all cow chromosomes.