Cow genome map


           Conread name:
           rpfco0103_n16.y1
        

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 96
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               167, 99
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               156, 90
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               156, 24
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               167, 62
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               160, 204
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               164, 204
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               164, 204
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               203, 188
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               160, 92
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               160, 44
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               173, 93
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               160, 208
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               149, 63
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               156, 52
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-162
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               159, 61
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               149, 122
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 50
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               161, 41
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               153, 6
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               7-155
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-203
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               12-164
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 78
               

               Conread position:
               14-214
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               16-206
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               17-210
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-207
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 140
               

               Conread position:
               36-207
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               37-215
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               38-214
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               39-203
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               122, 65
               

               Conread position:
               44-202
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               52-215
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 131
               

               Conread position:
               52-224
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               54-216
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               55-207
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               55-215
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 154
               

               Conread position:
               60-210
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               61-206
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-210
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               97, 27
               

               Conread position:
               64-215
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               97, 119
               

               Conread position:
               65-207
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.