Cow genome map
Conread name: | rpfco0103_n16.y1 |
Conread position: | 1-152 |
Cow position: | chr14:7317198-7317047 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 124 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-158 |
Cow position: | chr14:38921295-38921143 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-162 |
Cow position: | chr14:17755921-17755759 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 131 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 1-164 |
Cow position: | chr14:40284264-40284101 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-164 |
Cow position: | chr14:44214786-44214629 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 1-199 |
Cow position: | chr14:25403584-25403778 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 1-202 |
Cow position: | chr14:28992796-28992591 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 144 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 1-203 |
Cow position: | chr14:19957547-19957751 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 138 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-203 |
Cow position: | chr14:22989396-22989193 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 164, 189 |
Conread position: | 1-203 |
Cow position: | chr14:39769861-39770074 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 61, 98 |
Conread position: | 1-206 |
Cow position: | chr14:106214-106422 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 163, 29 |
Conread position: | 1-206 |
Cow position: | chr14:6490340-6490547 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 1-206 |
Cow position: | chr14:47507466-47507257 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 153 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 165, 0 |
Conread position: | 1-207 |
Cow position: | chr14:11982015-11981809 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-207 |
Cow position: | chr14:18448651-18448853 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 86, 24 |
Conread position: | 1-207 |
Cow position: | chr14:21964478-21964276 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 52 |
Conread position: | 1-207 |
Cow position: | chr14:25779458-25779246 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1-207 |
Cow position: | chr14:27865776-27865980 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 167, 48 |
Conread position: | 1-207 |
Cow position: | chr14:33326033-33326237 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 1-208 |
Cow position: | chr14:21863669-21863875 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 143 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 1-208 |
Cow position: | chr14:49063796-49064006 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 141 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 164, 204 |
Conread position: | 1-210 |
Cow position: | chr14:41749402-41749606 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 1-215 |
Cow position: | chr14:48427438-48427221 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 163 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 160, 208 |
Conread position: | 1-218 |
Cow position: | chr14:5645965-5646187 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 150 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 164, 0 |
Conread position: | 1-222 |
Cow position: | chr14:7558077-7558291 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 160, 33 |
Conread position: | 1-224 |
Cow position: | chr14:39618023-39618237 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 2-155 |
Cow position: | chr14:37236835-37236685 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 2-184 |
Cow position: | chr14:47584288-47584470 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 142 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-207 |
Cow position: | chr14:20016347-20016546 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 152 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-207 |
Cow position: | chr14:33538568-33538765 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 155 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 88, 72 |
Conread position: | 2-207 |
Cow position: | chr14:45605450-45605246 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 3-153 |
Cow position: | chr14:36775960-36775810 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-164 |
Cow position: | chr14:45042553-45042392 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-215 |
Cow position: | chr14:19189397-19189184 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 160 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 163, 60 |
Conread position: | 3-215 |
Cow position: | chr14:39779113-39778898 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 161, 206 |
Conread position: | 3-215 |
Cow position: | chr14:41211229-41211001 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 58, 219 |
Conread position: | 3-216 |
Cow position: | chr14:8784535-8784329 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 149 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 4-167 |
Cow position: | chr14:37151281-37151444 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 126 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 52, 151 |
Conread position: | 5-159 |
Cow position: | chr14:12546231-12546383 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 15, 21 |
Conread position: | 5-203 |
Cow position: | chr14:46965918-46965718 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 49, 88 |
Conread position: | 6-203 |
Cow position: | chr14:36585603-36585799 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 137 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 6-206 |
Cow position: | chr14:39926542-39926351 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 6-207 |
Cow position: | chr14:50556427-50556230 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 7-164 |
Cow position: | chr14:18811763-18811920 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-209 |
Cow position: | chr14:44557480-44557680 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 139 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 13-164 |
Cow position: | chr14:28324987-28324837 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 13-203 |
Cow position: | chr14:35381938-35381749 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 157, 141 |
Conread position: | 22-215 |
Cow position: | chr14:18345393-18345586 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 139 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 139, 18 |
Conread position: | 35-206 |
Cow position: | chr14:18484913-18485088 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 39-207 |
Cow position: | chr14:26880482-26880650 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 117 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 54-206 |
Cow position: | chr14:19850723-19850872 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 54-207 |
Cow position: | chr14:41128199-41128048 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 112 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 119, 40 |
Conread position: | 56-207 |
Cow position: | chr14:25231342-25231490 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 56-215 |
Cow position: | chr14:36709429-36709267 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 106, 35 |
Conread position: | 57-159 |
Cow position: | chr14:14317172-14317069 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 58-203 |
Cow position: | chr14:16834635-16834494 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 61-220 |
Cow position: | chr14:15795508-15795664 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 142, 112 |
Conread position: | 64-207 |
Cow position: | chr14:38143815-38143957 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 67-206 |
Cow position: | chr14:19996614-19996475 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.