Cow genome map


           Conread name:
           rpfco0103_n16.y1
        

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 94
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 89
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               156, 93
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 75
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               160, 14
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               152, 53
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 45
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 157
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               152, 204
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               158, 206
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               160, 83
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               160, 215
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               160, 39
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               169, 48
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               160, 44
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               2-164
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-199
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               4-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               4-206
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               4-206
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 89
               

               Conread position:
               4-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               157, 205
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-207
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 105
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               174, 56
               

               Conread position:
               10-190
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               11-203
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               11-203
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-224
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               12-203
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               149, 31
               

               Conread position:
               12-216
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               148, 196
               

               Conread position:
               16-207
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               35-206
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               54-202
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               54-214
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               124, 152
               

               Conread position:
               54-249
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               69-206
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.