Cow genome map


           Conread name:
           rpfco0103_n16.y1
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               160, 46
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               180, 51
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               160, 101
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               90, 165
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               174, 51
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 42
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 171
               

               Conread position:
               2-157
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-191
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 90
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               214, 154
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               158, 204
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               158, 88
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               4-207
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-207
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               4-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               5-207
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-164
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               10-164
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               10-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               44, 182
               

               Conread position:
               21-203
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               25-164
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-162
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-207
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               54-207
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               55-207
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               57-215
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               63-203
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               73-207
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.