Cow genome map

Conread name: rpfco0103_n16.y1

Conread position: 1-155
Cow position: chr22:11037952-11038106 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-158
Cow position: chr22:8882697-8882859 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 24

Conread position: 1-158
Cow position: chr22:16620857-16621008 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-159
Cow position: chr22:21330768-21330610 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position: chr22:28071235-28071390 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 1-164
Cow position: chr22:3808968-3809131 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr22:10937154-10936992 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 1-164
Cow position: chr22:18258906-18259069 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr22:22022568-22022727 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 1-164
Cow position: chr22:34608659-34608822 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-167
Cow position: chr22:45513842-45513676 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 162, 88

Conread position: 1-195
Cow position: chr22:27002449-27002643 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-200
Cow position: chr22:5282186-5282383 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 159, 52

Conread position: 1-201
Cow position: chr22:27171577-27171377 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 53

Conread position: 1-202
Cow position: chr22:9734537-9734733 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 1-203
Cow position: chr22:3960618-3960409 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 1-203
Cow position: chr22:19788005-19787800 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 97

Conread position: 1-203
Cow position: chr22:21012071-21012270 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1-203
Cow position: chr22:33986087-33985882 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 165, 90

Conread position: 1-206
Cow position: chr22:11987536-11987332 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 160, 44

Conread position: 1-206
Cow position: chr22:12682117-12681914 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 112

Conread position: 1-206
Cow position: chr22:15919957-15919749 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 160, 184

Conread position: 1-206
Cow position: chr22:25943159-25943359 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 156, 0

Conread position: 1-206
Cow position: chr22:26134554-26134348 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 151, 44

Conread position: 1-207
Cow position: chr22:5836912-5837115 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 1-207
Cow position: chr22:18926032-18926239 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 160, 51

Conread position: 1-207
Cow position: chr22:26106736-26106942 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-207
Cow position: chr22:27329207-27329008 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 92

Conread position: 1-207
Cow position: chr22:30514933-30515136 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 0

Conread position: 1-207
Cow position: chr22:31497425-31497215 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 161, 0

Conread position: 1-207
Cow position: chr22:39452257-39452476 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 1-207
Cow position: chr22:40374284-40374490 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-207
Cow position: chr22:42933810-42933600 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 149, 0

Conread position: 1-207
Cow position: chr22:43292224-43292013 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 1-209
Cow position: chr22:10161644-10161851 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 41

Conread position: 1-210
Cow position: chr22:6092964-6092761 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 195, 95

Conread position: 1-214
Cow position: chr22:43397697-43397903 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 1-215
Cow position: chr22:4645456-4645664 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 1-215
Cow position: chr22:10631053-10631267 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 160, 93

Conread position: 1-215
Cow position: chr22:13720855-13720632 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 1-215
Cow position: chr22:22160399-22160615 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 150, 90

Conread position: 1-215
Cow position: chr22:40349024-40349241 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 159

Conread position: 1-216
Cow position: chr22:9977495-9977712 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 56, 91

Conread position: 1-218
Cow position: chr22:15293019-15292805 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 12

Conread position: 2-159
Cow position: chr22:28370626-28370782 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 2-173
Cow position: chr22:8481328-8481497 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 5

Conread position: 2-203
Cow position: chr22:8876950-8877156 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 2-203
Cow position: chr22:41045235-41045038 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 166, 0

Conread position: 2-207
Cow position: chr22:11500460-11500664 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 28, 97

Conread position: 2-207
Cow position: chr22:15859686-15859885 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 2-207
Cow position: chr22:38940269-38940065 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 2-212
Cow position: chr22:1111-1319 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 2-215
Cow position: chr22:29290456-29290242 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 5

Conread position: 2-215
Cow position: chr22:41983025-41982824 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-207
Cow position: chr22:1484542-1484746 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-209
Cow position: chr22:23856728-23856935 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 163, 0

Conread position: 3-215
Cow position: chr22:4119888-4119674 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 151, 212

Conread position: 3-215
Cow position: chr22:39472696-39472485 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 202, 0

Conread position: 7-165
Cow position: chr22:34735334-34735492 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 10-172
Cow position: chr22:30206564-30206403 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 10-203
Cow position: chr22:15039498-15039302 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 38

Conread position: 11-203
Cow position: chr22:27700902-27701093 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 12-171
Cow position: chr22:12998623-12998464 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-203
Cow position: chr22:15398886-15398698 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 12-207
Cow position: chr22:34726363-34726556 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 15-215
Cow position: chr22:2502530-2502727 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 19-216
Cow position: chr22:30093949-30094137 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 26-167
Cow position: chr22:13950875-13951017 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 77

Conread position: 27-215
Cow position: chr22:3993314-3993503 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 180

Conread position: 35-203
Cow position: chr22:3842338-3842511 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 44-206
Cow position: chr22:1975334-1975495 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 54-203
Cow position: chr22:9127137-9127286 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 37

Conread position: 55-215
Cow position: chr22:15090472-15090632 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 57-207
Cow position: chr22:534227-534381 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 64-207
Cow position: chr22:10683924-10683777 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 65-213
Cow position: chr22:26658797-26658946 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 138, 0

Show alignments to all cow chromosomes.